RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 KLF4O43474 513 aa15.33■□□□□ 0.04
LIME1-202ENST00000444951 RNF13O43567 381 aa15.33■□□□□ 0.04
LIME1-202ENST00000444951 DNPH1O43598 174 aa15.33■□□□□ 0.04
LIME1-202ENST00000444951 MGRN1O60291 552 aa15.33■□□□□ 0.04
LIME1-202ENST00000444951 HPRP00739 348 aa15.33■□□□□ 0.04
LIME1-202ENST00000444951 PLGP00747 810 aaPredicted RBP15.33■□□□□ 0.04
LIME1-202ENST00000444951 IGF2P01344 180 aa15.33■□□□□ 0.04
LIME1-202ENST00000444951 HOXD4P09016 255 aaPredicted RBP15.33■□□□□ 0.04
LIME1-202ENST00000444951 ANXA8P13928 327 aa15.33■□□□□ 0.04
LIME1-202ENST00000444951 FPR3P25089 353 aa15.33■□□□□ 0.04
LIME1-202ENST00000444951 GSSP48637 474 aa15.33■□□□□ 0.04
LIME1-202ENST00000444951 DAPP51397 102 aa15.33■□□□□ 0.04
LIME1-202ENST00000444951 H3F3AP84243 136 aa15.33■□□□□ 0.04
LIME1-202ENST00000444951 RPL18Q07020 188 aaKnown RBP15.33■□□□□ 0.04
LIME1-202ENST00000444951 RASGEF1BQ0VAM2 473 aa15.33■□□□□ 0.04
LIME1-202ENST00000444951 PMPCAQ10713 525 aa15.33■□□□□ 0.04
LIME1-202ENST00000444951 TSPAN31Q12999 210 aa15.33■□□□□ 0.04
LIME1-202ENST00000444951 ZBED5Q49AG3 693 aa15.33■□□□□ 0.04
LIME1-202ENST00000444951 LPCAT4Q643R3 524 aa15.33■□□□□ 0.04
LIME1-202ENST00000444951 GALNT5Q7Z7M9 940 aa15.33■□□□□ 0.04
LIME1-202ENST00000444951 ADGRE4PQ86SQ3 457 aa15.33■□□□□ 0.04
LIME1-202ENST00000444951 IGFN1Q86VF2 1251 aa15.33■□□□□ 0.04
LIME1-202ENST00000444951 CBR4Q8N4T8 237 aa15.33■□□□□ 0.04
LIME1-202ENST00000444951 SCAIQ8N9R8 606 aa15.33■□□□□ 0.04
LIME1-202ENST00000444951 WNT2BQ93097 391 aa15.33■□□□□ 0.04
LIME1-202ENST00000444951 EME1Q96AY2 570 aa15.33■□□□□ 0.04
LIME1-202ENST00000444951 DMRTA2Q96SC8 542 aa15.33■□□□□ 0.04
LIME1-202ENST00000444951 UCK2Q9BZX2 261 aa15.33■□□□□ 0.04
LIME1-202ENST00000444951 CALHM2Q9HA72 323 aa15.33■□□□□ 0.04
LIME1-202ENST00000444951 RNPEPL1Q9HAU8 725 aa15.33■□□□□ 0.04
LIME1-202ENST00000444951 B3GALT5Q9Y2C3 310 aa15.33■□□□□ 0.04
LIME1-202ENST00000444951 ARRDC5A6NEK1 342 aa15.32■□□□□ 0.04
LIME1-202ENST00000444951 CD8B2A6NJW9 211 aa15.32■□□□□ 0.04
LIME1-202ENST00000444951 MS4A18H0YCH9 400 aa15.32■□□□□ 0.04
LIME1-202ENST00000444951 CYTIPO60759 359 aa15.32■□□□□ 0.04
LIME1-202ENST00000444951 SOX14O95416 240 aa15.32■□□□□ 0.04
LIME1-202ENST00000444951 CLDN14O95500 239 aa15.32■□□□□ 0.04
LIME1-202ENST00000444951 ATP6V1G2O95670 118 aa15.32■□□□□ 0.04
LIME1-202ENST00000444951 ADAP00813 363 aa15.32■□□□□ 0.04
LIME1-202ENST00000444951 F13BP05160 661 aa15.32■□□□□ 0.04
LIME1-202ENST00000444951 IGFBP1P08833 259 aaPredicted RBP15.32■□□□□ 0.04
LIME1-202ENST00000444951 GLI4P10075 376 aa15.32■□□□□ 0.04
LIME1-202ENST00000444951 FCGR2AP12318 317 aa15.32■□□□□ 0.04
LIME1-202ENST00000444951 AGAP20933 346 aa15.32■□□□□ 0.04
LIME1-202ENST00000444951 SLC9A3P48764 834 aa15.32■□□□□ 0.04
LIME1-202ENST00000444951 P2RY4P51582 365 aa15.32■□□□□ 0.04
LIME1-202ENST00000444951 SMSP52788 366 aa15.32■□□□□ 0.04
LIME1-202ENST00000444951 KRTAP10-9P60411 292 aa15.32■□□□□ 0.04
LIME1-202ENST00000444951 SLC34A1Q06495 639 aa15.32■□□□□ 0.04
LIME1-202ENST00000444951 PUDPQ08623 228 aa15.32■□□□□ 0.04
LIME1-202ENST00000444951 C1DQ13901 141 aaKnown RBP15.32■□□□□ 0.04
LIME1-202ENST00000444951 MS4A18Q3C1V0 323 aa15.32■□□□□ 0.04
LIME1-202ENST00000444951 FANK1Q8TC84 345 aa15.32■□□□□ 0.04
LIME1-202ENST00000444951 RNF128Q8TEB7 428 aa15.32■□□□□ 0.04
LIME1-202ENST00000444951 LIPHQ8WWY8 451 aa15.32■□□□□ 0.04
LIME1-202ENST00000444951 INTS12Q96CB8 462 aaKnown RBP15.32■□□□□ 0.04
LIME1-202ENST00000444951 TTYH2Q9BSA4 534 aa15.32■□□□□ 0.04
LIME1-202ENST00000444951 C9orf16Q9BUW7 83 aa15.32■□□□□ 0.04
LIME1-202ENST00000444951 DGCR6LQ9BY27 220 aa15.32■□□□□ 0.04
LIME1-202ENST00000444951 EGLN3Q9H6Z9 239 aa15.32■□□□□ 0.04
LIME1-202ENST00000444951 MCCC2Q9HCC0 563 aa15.32■□□□□ 0.04
LIME1-202ENST00000444951 TAS2R5Q9NYW4 299 aa15.32■□□□□ 0.04
LIME1-202ENST00000444951 RASD1Q9Y272 281 aa15.32■□□□□ 0.04
LIME1-202ENST00000444951 SOCS2O14508 198 aa15.31■□□□□ 0.04
LIME1-202ENST00000444951 EI24O14681 340 aa15.31■□□□□ 0.04
LIME1-202ENST00000444951 MITFO75030 526 aaPredicted RBP15.31■□□□□ 0.04
LIME1-202ENST00000444951 HLA-DOBP13765 273 aa15.31■□□□□ 0.04
LIME1-202ENST00000444951 GSTM3P21266 225 aa15.31■□□□□ 0.04
LIME1-202ENST00000444951 POU1F1P28069 291 aa15.31■□□□□ 0.04
LIME1-202ENST00000444951 PEX2P28328 305 aa15.31■□□□□ 0.04
LIME1-202ENST00000444951 RPL4P36578 427 aaKnown RBP15.31■□□□□ 0.04
LIME1-202ENST00000444951 SIRPAP78324 504 aa15.31■□□□□ 0.04
LIME1-202ENST00000444951 POU3F1Q03052 451 aaPredicted RBP15.31■□□□□ 0.04
LIME1-202ENST00000444951 ALG10Q5BKT4 473 aa15.31■□□□□ 0.04
LIME1-202ENST00000444951 EEF1A1P5Q5VTE0 462 aa15.31■□□□□ 0.04
LIME1-202ENST00000444951 GTF2IRD2BQ6EKJ0 949 aa15.31■□□□□ 0.04
LIME1-202ENST00000444951 ABLIM2Q6H8Q1 611 aa15.31■□□□□ 0.04
LIME1-202ENST00000444951 FAHD1Q6P587 224 aa15.31■□□□□ 0.04
LIME1-202ENST00000444951 KLHL17Q6TDP4 642 aa15.31■□□□□ 0.04
LIME1-202ENST00000444951 ZBTB49Q6ZSB9 765 aa15.31■□□□□ 0.04
LIME1-202ENST00000444951 SEM1Q6ZVN7 128 aa15.31■□□□□ 0.04
LIME1-202ENST00000444951 GTF2IRD2Q86UP8 949 aa15.31■□□□□ 0.04
LIME1-202ENST00000444951 KIF18BQ86Y91 864 aa15.31■□□□□ 0.04
LIME1-202ENST00000444951 UEVLDQ8IX04 471 aa15.31■□□□□ 0.04
LIME1-202ENST00000444951 SLC43A2Q8N370 569 aa15.31■□□□□ 0.04
LIME1-202ENST00000444951 MARVELD2Q8N4S9 558 aa15.31■□□□□ 0.04
LIME1-202ENST00000444951 OR9K2Q8NGE7 335 aa15.31■□□□□ 0.04
LIME1-202ENST00000444951 MAGEE2Q8TD90 523 aaPredicted RBP15.31■□□□□ 0.04
LIME1-202ENST00000444951 SAMD8Q96LT4 415 aa15.31■□□□□ 0.04
LIME1-202ENST00000444951 OXGR1Q96P68 337 aa15.31■□□□□ 0.04
LIME1-202ENST00000444951 TM9SF2Q99805 663 aa15.31■□□□□ 0.04
LIME1-202ENST00000444951 PSD2Q9BQI7 771 aa15.31■□□□□ 0.04
LIME1-202ENST00000444951 GABARAPL1Q9H0R8 117 aa15.31■□□□□ 0.04
LIME1-202ENST00000444951 KRT84Q9NSB2 600 aa15.31■□□□□ 0.04
LIME1-202ENST00000444951 KLHL9Q9P2J3 617 aa15.31■□□□□ 0.04
LIME1-202ENST00000444951 SIGLEC7Q9Y286 467 aa15.31■□□□□ 0.04
LIME1-202ENST00000444951 H3BN98 237 aa15.3■□□□□ 0.04
LIME1-202ENST00000444951 IL2RAP01589 272 aa15.3■□□□□ 0.04
LIME1-202ENST00000444951 ZNF26P17031 533 aaPredicted RBP15.3■□□□□ 0.04
LIME1-202ENST00000444951 ZNF43P17038 809 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms