RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 USH1CQ9Y6N9 552 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 UBR1Q8IWV7 1749 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 ARHGAP35Q9NRY4 1499 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 PSMB11A5LHX3 300 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 OR11H12B2RN74 326 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 M0R082 166 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 KPNA3O00505 521 aaPredicted RBP3.5□□□□□ -1.85
UBR3-206ENST00000444475 SLC19A2O60779 497 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 C1RP00736 705 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 DAOP14920 347 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 HIST1H1CP16403 213 aaKnown RBP3.5□□□□□ -1.85
UBR3-206ENST00000444475 AMPD1P23109 780 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 SSTR2P30874 369 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 PMELP40967 661 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 MTHFSP49914 203 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 UBE2MP61081 183 aaKnown RBP3.5□□□□□ -1.85
UBR3-206ENST00000444475 ACVR1Q04771 509 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 PTGR1Q14914 329 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 CDSNQ15517 529 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 MS4A18Q3C1V0 323 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 CEACAM21Q3KPI0 293 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 MIIPQ5JXC2 388 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 ELP2Q6IA86 826 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 LARP4Q71RC2 724 aaKnown RBP eCLIP3.5□□□□□ -1.85
UBR3-206ENST00000444475 ERI1Q8IV48 349 aaKnown RBP3.5□□□□□ -1.85
UBR3-206ENST00000444475 CMTM4Q8IZR5 234 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 HSD17B11Q8NBQ5 300 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 OR11H1Q8NG94 326 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 OR11H2Q8NH07 326 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 ZNF417Q8TAU3 575 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 CA5BP1Q8WTZ4 195 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 NEU4Q8WWR8 484 aaPredicted RBP3.5□□□□□ -1.85
UBR3-206ENST00000444475 ZNF587Q96SQ5 575 aaPredicted RBP3.5□□□□□ -1.85
UBR3-206ENST00000444475 GPHA2Q96T91 129 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 HBEGFQ99075 208 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 TIMM29Q9BSF4 260 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 IFT27Q9BW83 186 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 COL25A1Q9BXS0 654 aaPredicted RBP3.5□□□□□ -1.85
UBR3-206ENST00000444475 PATZ1Q9HBE1 687 aaKnown RBP3.5□□□□□ -1.85
UBR3-206ENST00000444475 NMRAL1Q9HBL8 299 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 EML4Q9HC35 981 aaKnown RBP3.5□□□□□ -1.85
UBR3-206ENST00000444475 NUP50Q9UKX7 468 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 RAP2CQ9Y3L5 183 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 WDR90Q96KV7 1748 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 RTL9Q8NET4 1388 aa3.5□□□□□ -1.85
UBR3-206ENST00000444475 USP32Q8NFA0 1604 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 CAMTA1Q9Y6Y1 1673 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 NUP188Q5SRE5 1749 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 A0A1B0GV72 72 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 C9orf170A2RU37 121 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 H7C0C1 242 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 DCTN6O00399 190 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 PSPNO60542 156 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 SRP72O76094 671 aaKnown RBP3.49□□□□□ -1.85
UBR3-206ENST00000444475 FBP1P09467 338 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 PET100P0DJ07 73 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 UQCRBP14927 111 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 ARR3P36575 388 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 MATKP42679 507 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 GNPDA1P46926 289 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 OR4D2P58180 307 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 ERVK-8P63133 956 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 OR1C1Q15619 314 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 HAGHQ16775 308 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 TMEM52BQ4KMG9 183 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 ZNF544Q6NX49 715 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 CASP12Q6UXS9 341 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 RBM44Q6ZP01 1051 aaKnown RBP3.49□□□□□ -1.85
UBR3-206ENST00000444475 ACOT7LQ6ZUV0 252 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 TMEM135Q86UB9 458 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 TMEM17Q86X19 198 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 LINC01465Q8N7H1 131 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 OR5L1Q8NGL2 311 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 EDARADDQ8WWZ3 215 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 MYLPFQ96A32 169 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 NTNG2Q96CW9 530 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 GRAMD2BQ96HH9 432 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 FAM46AQ96IP4 442 aaKnown RBP3.49□□□□□ -1.85
UBR3-206ENST00000444475 SLC19A3Q9BZV2 496 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 C10orf88Q9H8K7 445 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 HINT3Q9NQE9 182 aaKnown RBP3.49□□□□□ -1.85
UBR3-206ENST00000444475 IMPAD1Q9NX62 359 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 ZNF391Q9UJN7 358 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 SLC17A4Q9Y2C5 497 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 INO80Q9ULG1 1556 aaPredicted RBP3.49□□□□□ -1.85
UBR3-206ENST00000444475 COL24A1Q17RW2 1714 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 FRMPD3Q5JV73 1810 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 SPEF2Q9C093 1822 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 TRAV18A0A075B6X5 111 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 TEX13DA0A0J9YY54 714 aaPredicted RBP3.49□□□□□ -1.85
UBR3-206ENST00000444475 PRSS51A0A1B0GVH4 220 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 HYKKA2RU49 373 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 NEURL1BA8MQ27 555 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 DISC1C4P0D8 188 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 H3BS24 57 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 AQP8O94778 261 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 NDUFA10O95299 355 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 P04436 131 aa3.49□□□□□ -1.85
UBR3-206ENST00000444475 KLK3P07288 261 aaPredicted RBP3.49□□□□□ -1.85
UBR3-206ENST00000444475 GTF2F2P13984 249 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms