RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 DAPP51397 102 aa14.06□□□□□ -0.16
USP40-206ENST00000443711 PMPCAQ10713 525 aa14.06□□□□□ -0.16
USP40-206ENST00000443711 FHL1Q13642 323 aa14.06□□□□□ -0.16
USP40-206ENST00000443711 DAG1Q14118 895 aa14.06□□□□□ -0.16
USP40-206ENST00000443711 POU4F3Q15319 338 aa14.06□□□□□ -0.16
USP40-206ENST00000443711 ALG10Q5BKT4 473 aa14.06□□□□□ -0.16
USP40-206ENST00000443711 RIPPLY2Q5TAB7 128 aa14.06□□□□□ -0.16
USP40-206ENST00000443711 ANKRD34AQ69YU3 496 aa14.06□□□□□ -0.16
USP40-206ENST00000443711 SMARCD3Q6STE5 483 aa14.06□□□□□ -0.16
USP40-206ENST00000443711 KLHL17Q6TDP4 642 aa14.06□□□□□ -0.16
USP40-206ENST00000443711 ZBTB49Q6ZSB9 765 aa14.06□□□□□ -0.16
USP40-206ENST00000443711 EPHX4Q8IUS5 362 aa14.06□□□□□ -0.16
USP40-206ENST00000443711 UEVLDQ8IX04 471 aa14.06□□□□□ -0.16
USP40-206ENST00000443711 RPRMLQ8N4K4 120 aa14.06□□□□□ -0.16
USP40-206ENST00000443711 CBR4Q8N4T8 237 aa14.06□□□□□ -0.16
USP40-206ENST00000443711 ANKK1Q8NFD2 765 aa14.06□□□□□ -0.16
USP40-206ENST00000443711 OR9K2Q8NGE7 335 aa14.06□□□□□ -0.16
USP40-206ENST00000443711 MOSPD2Q8NHP6 518 aa14.06□□□□□ -0.16
USP40-206ENST00000443711 GMPPAQ96IJ6 420 aaPredicted RBP14.06□□□□□ -0.16
USP40-206ENST00000443711 DMRTA2Q96SC8 542 aa14.06□□□□□ -0.16
USP40-206ENST00000443711 INIPQ9NRY2 104 aa14.06□□□□□ -0.16
USP40-206ENST00000443711 KRT84Q9NSB2 600 aa14.06□□□□□ -0.16
USP40-206ENST00000443711 POFUT2Q9Y2G5 429 aa14.06□□□□□ -0.16
USP40-206ENST00000443711 ZNF462Q96JM2 2506 aa14.06□□□□□ -0.16
USP40-206ENST00000443711 ZNF724A8MTY0 619 aa14.05□□□□□ -0.16
USP40-206ENST00000443711 CASQ2O14958 399 aaPredicted RBP14.05□□□□□ -0.16
USP40-206ENST00000443711 TOXO94900 526 aa14.05□□□□□ -0.16
USP40-206ENST00000443711 F13BP05160 661 aa14.05□□□□□ -0.16
USP40-206ENST00000443711 YES1P07947 543 aa14.05□□□□□ -0.16
USP40-206ENST00000443711 TMIGD3P0DMS9 266 aaPredicted RBP14.05□□□□□ -0.16
USP40-206ENST00000443711 RPL4P36578 427 aaKnown RBP14.05□□□□□ -0.16
USP40-206ENST00000443711 RFX4Q33E94 735 aa14.05□□□□□ -0.16
USP40-206ENST00000443711 TMEM201Q5SNT2 666 aa14.05□□□□□ -0.16
USP40-206ENST00000443711 EEF1A1P5Q5VTE0 462 aa14.05□□□□□ -0.16
USP40-206ENST00000443711 KDM4DQ6B0I6 523 aa14.05□□□□□ -0.16
USP40-206ENST00000443711 ZNF620Q6ZNG0 422 aa14.05□□□□□ -0.16
USP40-206ENST00000443711 CREB3L2Q70SY1 520 aa14.05□□□□□ -0.16
USP40-206ENST00000443711 CLDN22Q8N7P3 220 aa14.05□□□□□ -0.16
USP40-206ENST00000443711 FANK1Q8TC84 345 aa14.05□□□□□ -0.16
USP40-206ENST00000443711 INTS12Q96CB8 462 aaKnown RBP14.05□□□□□ -0.16
USP40-206ENST00000443711 OR52D1Q9H346 318 aa14.05□□□□□ -0.16
USP40-206ENST00000443711 BCO1Q9HAY6 547 aa14.05□□□□□ -0.16
USP40-206ENST00000443711 PAPOLBQ9NRJ5 636 aaKnown RBP14.05□□□□□ -0.16
USP40-206ENST00000443711 USE1Q9NZ43 259 aa14.05□□□□□ -0.16
USP40-206ENST00000443711 B3GAT1Q9P2W7 334 aa14.05□□□□□ -0.16
USP40-206ENST00000443711 REV1Q9UBZ9 1251 aa14.05□□□□□ -0.16
USP40-206ENST00000443711 ING1Q9UK53 422 aaPredicted RBP14.05□□□□□ -0.16
USP40-206ENST00000443711 CLEC4AQ9UMR7 237 aa14.05□□□□□ -0.16
USP40-206ENST00000443711 FLVCR1Q9Y5Y0 555 aa14.05□□□□□ -0.16
USP40-206ENST00000443711 CDH10Q9Y6N8 788 aa14.05□□□□□ -0.16
USP40-206ENST00000443711 A0A1W2PRG6 482 aa14.04□□□□□ -0.16
USP40-206ENST00000443711 HSPB2A8KAH6 182 aa14.04□□□□□ -0.16
USP40-206ENST00000443711 SOCS2O14508 198 aa14.04□□□□□ -0.16
USP40-206ENST00000443711 EI24O14681 340 aa14.04□□□□□ -0.16
USP40-206ENST00000443711 SS18L1O75177 396 aaPredicted RBP14.04□□□□□ -0.16
USP40-206ENST00000443711 OSMP13725 252 aa14.04□□□□□ -0.16
USP40-206ENST00000443711 HLA-DOBP13765 273 aa14.04□□□□□ -0.16
USP40-206ENST00000443711 IGFBP5P24593 272 aa14.04□□□□□ -0.16
USP40-206ENST00000443711 SLC6A6P31641 620 aa14.04□□□□□ -0.16
USP40-206ENST00000443711 ALDH3A2P51648 485 aa14.04□□□□□ -0.16
USP40-206ENST00000443711 CTXN1P60606 82 aa14.04□□□□□ -0.16
USP40-206ENST00000443711 PPP2R2BQ00005 443 aa14.04□□□□□ -0.16
USP40-206ENST00000443711 POU3F1Q03052 451 aaPredicted RBP14.04□□□□□ -0.16
USP40-206ENST00000443711 HSPB2Q16082 182 aa14.04□□□□□ -0.16
USP40-206ENST00000443711 C4orf17Q53FE4 359 aa14.04□□□□□ -0.16
USP40-206ENST00000443711 LPCAT4Q643R3 524 aa14.04□□□□□ -0.16
USP40-206ENST00000443711 MTFR2Q6P444 385 aa14.04□□□□□ -0.16
USP40-206ENST00000443711 DPY19L2P2Q6ZN68 376 aa14.04□□□□□ -0.16
USP40-206ENST00000443711 SLC35D2Q76EJ3 337 aa14.04□□□□□ -0.16
USP40-206ENST00000443711 KIF18BQ86Y91 864 aa14.04□□□□□ -0.16
USP40-206ENST00000443711 TUSC5Q8IXB3 177 aa14.04□□□□□ -0.16
USP40-206ENST00000443711 GCNT2Q8N0V5 402 aa14.04□□□□□ -0.16
USP40-206ENST00000443711 PARP8Q8N3A8 854 aa14.04□□□□□ -0.16
USP40-206ENST00000443711 MARVELD2Q8N4S9 558 aa14.04□□□□□ -0.16
USP40-206ENST00000443711 LRRC75AQ8NAA5 344 aa14.04□□□□□ -0.16
USP40-206ENST00000443711 OR52L1Q8NGH7 329 aa14.04□□□□□ -0.16
USP40-206ENST00000443711 MAGEE2Q8TD90 523 aaPredicted RBP14.04□□□□□ -0.16
USP40-206ENST00000443711 RND1Q92730 232 aa14.04□□□□□ -0.16
USP40-206ENST00000443711 ZNF775Q96BV0 537 aaPredicted RBP14.04□□□□□ -0.16
USP40-206ENST00000443711 SAMD8Q96LT4 415 aa14.04□□□□□ -0.16
USP40-206ENST00000443711 C8orf4Q9NR00 106 aa14.04□□□□□ -0.16
USP40-206ENST00000443711 IL20Q9NYY1 176 aa14.04□□□□□ -0.16
USP40-206ENST00000443711 ENOPH1Q9UHY7 261 aa14.04□□□□□ -0.16
USP40-206ENST00000443711 EMC9Q9Y3B6 208 aa14.04□□□□□ -0.16
USP40-206ENST00000443711 ORC6Q9Y5N6 252 aa14.04□□□□□ -0.16
USP40-206ENST00000443711 INTS1Q8N201 2190 aaKnown RBP14.04□□□□□ -0.16
USP40-206ENST00000443711 H3BN98 237 aa14.03□□□□□ -0.16
USP40-206ENST00000443711 LRRTM2O43300 516 aa14.03□□□□□ -0.16
USP40-206ENST00000443711 TRAF3IP2O43734 574 aaPredicted RBP14.03□□□□□ -0.16
USP40-206ENST00000443711 AKAP8O43823 692 aaKnown RBP14.03□□□□□ -0.16
USP40-206ENST00000443711 SERPINI2O75830 405 aa14.03□□□□□ -0.16
USP40-206ENST00000443711 TP53P04637 393 aaPredicted RBP14.03□□□□□ -0.16
USP40-206ENST00000443711 ALPLP05186 524 aa14.03□□□□□ -0.16
USP40-206ENST00000443711 ZNF26P17031 533 aaPredicted RBP14.03□□□□□ -0.16
USP40-206ENST00000443711 CTSSP25774 331 aa14.03□□□□□ -0.16
USP40-206ENST00000443711 FXYD6P3P58550 94 aa14.03□□□□□ -0.16
USP40-206ENST00000443711 LRRC36Q1X8D7 754 aa14.03□□□□□ -0.16
USP40-206ENST00000443711 OGFRL1Q5TC84 451 aaPredicted RBP14.03□□□□□ -0.16
USP40-206ENST00000443711 NHLRC1Q6VVB1 395 aa14.03□□□□□ -0.16
USP40-206ENST00000443711 THSD4Q6ZMP0 1018 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms