RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 J3QLW9 94 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 ETV2O00321 342 aaPredicted RBP5.45□□□□□ -1.54
VPS50-205ENST00000441602 ARHGEF9O43307 516 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 GPRIN2O60269 458 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 NPIPB7O75200 414 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 DXOO77932 396 aaKnown RBP5.45□□□□□ -1.54
VPS50-205ENST00000441602 IGHMP01871 453 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 KRT8P05787 483 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 MRPL3P09001 348 aaKnown RBP5.45□□□□□ -1.54
VPS50-205ENST00000441602 ZNF19P17023 458 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 SLC2A5P22732 501 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 DPP4P27487 766 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 GAS1P54826 345 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 RRADP55042 308 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 DSCR4P56555 118 aaPredicted RBP5.45□□□□□ -1.54
VPS50-205ENST00000441602 OC90Q02509 493 aaPredicted RBP5.45□□□□□ -1.54
VPS50-205ENST00000441602 PUDPQ08623 228 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 PLPPR5Q32ZL2 321 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 PDSS1Q5T2R2 415 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 PIP4P1Q86T03 277 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 TMPRSS12Q86WS5 348 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 SIRT6Q8N6T7 355 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 LRRC75AQ8NAA5 344 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 NPEPL1Q8NDH3 523 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 ZNF417Q8TAU3 575 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 PAQR8Q8TEZ7 354 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 ADAD1Q96M93 576 aaKnown RBP5.45□□□□□ -1.54
VPS50-205ENST00000441602 RBP7Q96R05 134 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 ZNF587Q96SQ5 575 aaPredicted RBP5.45□□□□□ -1.54
VPS50-205ENST00000441602 ENKD1Q9H0I2 346 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 ADGRL4Q9HBW9 690 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 GALNT9Q9HCQ5 603 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 RPRD1BQ9NQG5 326 aaKnown RBP5.45□□□□□ -1.54
VPS50-205ENST00000441602 B4GALT7Q9UBV7 327 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 ZNF346Q9UL40 294 aaKnown RBP5.45□□□□□ -1.54
VPS50-205ENST00000441602 BOKQ9UMX3 212 aaPredicted RBP5.45□□□□□ -1.54
VPS50-205ENST00000441602 POLHQ9Y253 713 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 ADAM18Q9Y3Q7 739 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 A0A075B6Q4 140 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 METTL15A6NJ78 407 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 C9orf172C9J069 976 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 PLPP3O14495 311 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 KHDRBS3O75525 346 aaKnown RBP5.45□□□□□ -1.54
VPS50-205ENST00000441602 HLA-DQA2P01906 255 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 F13BP05160 661 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 CELP19835 753 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 MST1P26927 711 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 RPS3AP61247 264 aaKnown RBP5.45□□□□□ -1.54
VPS50-205ENST00000441602 EGR4Q05215 589 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 SSX1Q16384 188 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 OR5M10Q6IEU7 315 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 PAQR6Q6TCH4 344 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 UEVLDQ8IX04 471 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 ARMC10Q8N2F6 343 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 FADS6Q8N9I5 356 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 OR6Q1Q8NGQ2 317 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 ASB17Q8WXJ9 295 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 SH3GL3Q99963 347 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 MED18Q9BUE0 208 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 NMNAT2Q9BZQ4 307 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 C6orf62Q9GZU0 229 aaPredicted RBP5.45□□□□□ -1.54
VPS50-205ENST00000441602 GALNT8Q9NY28 637 aa5.45□□□□□ -1.54
VPS50-205ENST00000441602 ASCC3Q8N3C0 2202 aaKnown RBP5.45□□□□□ -1.54
VPS50-205ENST00000441602 TAF4O00268 1085 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 EIF1BO60739 113 aaKnown RBP5.44□□□□□ -1.54
VPS50-205ENST00000441602 TMCC2O75069 709 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 CBR3O75828 277 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 ZNF432O94892 652 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 ZNF823P16415 610 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 ZNF17P17021 662 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 CSRP1P21291 193 aaKnown RBP5.44□□□□□ -1.54
VPS50-205ENST00000441602 CFL1P23528 166 aaKnown RBP5.44□□□□□ -1.54
VPS50-205ENST00000441602 NAA10P41227 235 aaPredicted RBP5.44□□□□□ -1.54
VPS50-205ENST00000441602 CYB561P49447 251 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 CSNK2A1P68400 391 aaPredicted RBP5.44□□□□□ -1.54
VPS50-205ENST00000441602 LTBQ06643 244 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 AIMP2Q13155 320 aaKnown RBP5.44□□□□□ -1.54
VPS50-205ENST00000441602 ACKR1Q16570 336 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 SPANXN2Q5MJ10 180 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 PRAMEF20Q5VT98 475 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 ARL9Q6T311 187 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 TIPARPQ7Z3E1 657 aaKnown RBP5.44□□□□□ -1.54
VPS50-205ENST00000441602 ATCAYQ86WG3 371 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 GTPBP8Q8N3Z3 284 aaPredicted RBP5.44□□□□□ -1.54
VPS50-205ENST00000441602 ZNF454Q8N9F8 522 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 DEFB124Q8NES8 71 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 OR10H5Q8NGA6 315 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 PHYHIPQ92561 330 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 PNPLA2Q96AD5 504 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 JSRP1Q96MG2 331 aaPredicted RBP5.44□□□□□ -1.54
VPS50-205ENST00000441602 TSPAN32Q96QS1 320 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 INTS14Q96SY0 518 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 PHOX2BQ99453 314 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 PIGQQ9BRB3 760 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 RTN4RQ9BZR6 473 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 RERGLQ9H628 205 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.44□□□□□ -1.54
VPS50-205ENST00000441602 C2orf72A6NCS6 295 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 LOC110117498-PIK3R3F6TDL0 507 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 LINC01387J3KSC0 135 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms