RNA–Protein interactions for RNA: ENST00000438704.6

HMGB2-202, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-202ENST00000438704 CAPZA2P47755 286 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 SLC25A1P53007 311 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 CDH11P55287 796 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 CLDN6P56747 220 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 ACSM1Q08AH1 577 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 ITGADQ13349 1161 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 GGTLC2Q14390 218 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 CCDC157Q569K6 752 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 SLC35D3Q5M8T2 416 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 WIPI1Q5MNZ9 446 aaPredicted RBP6.89□□□□□ -1.31
HMGB2-202ENST00000438704 FAM69BQ5VUD6 431 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 C1orf140Q5VVS0 124 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 SLC22A10Q63ZE4 541 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 SLC16A12Q6ZSM3 486 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 MEPCEQ7L2J0 689 aaKnown RBP6.89□□□□□ -1.31
HMGB2-202ENST00000438704 CXXC5Q7LFL8 322 aaKnown RBP6.89□□□□□ -1.31
HMGB2-202ENST00000438704 TMPRSS7Q7RTY8 843 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 MAMDC2Q7Z304 686 aaPredicted RBP6.89□□□□□ -1.31
HMGB2-202ENST00000438704 PLCZ1Q86YW0 608 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 CLVS1Q8IUQ0 354 aaPredicted RBP6.89□□□□□ -1.31
HMGB2-202ENST00000438704 ERI1Q8IV48 349 aaKnown RBP6.89□□□□□ -1.31
HMGB2-202ENST00000438704 CPOQ8IVL8 374 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 GTPBP8Q8N3Z3 284 aaPredicted RBP6.89□□□□□ -1.31
HMGB2-202ENST00000438704 NANOGP1Q8N7R0 232 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 WDSUB1Q8N9V3 476 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 ZNF485Q8NCK3 441 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 OR52I1Q8NGK6 324 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 OR51A7Q8NH64 312 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 MFSD8Q8NHS3 518 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 THAP3Q8WTV1 239 aaPredicted RBP6.89□□□□□ -1.31
HMGB2-202ENST00000438704 SLC25A43Q8WUT9 341 aaPredicted RBP6.89□□□□□ -1.31
HMGB2-202ENST00000438704 ASB15Q8WXK1 588 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 PTP4A1Q93096 173 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 KISS1RQ969F8 398 aaPredicted RBP6.89□□□□□ -1.31
HMGB2-202ENST00000438704 TAAR8Q969N4 342 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 ZBTB8AQ96BR9 441 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 KTI12Q96EK9 354 aaPredicted RBP6.89□□□□□ -1.31
HMGB2-202ENST00000438704 RNF31Q96EP0 1072 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 C1GALT1C1Q96EU7 318 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 DTNBP1Q96EV8 351 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 MOGAT1Q96PD6 335 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 ZNF649Q9BS31 505 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 MND1Q9BWT6 205 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 TAPBPLQ9BX59 468 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 CCDC90BQ9GZT6 254 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 PROK2Q9HC23 129 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 AMBNQ9NP70 447 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 ASCL3Q9NQ33 180 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 SACM1LQ9NTJ5 587 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 MRPL39Q9NYK5 338 aaKnown RBP6.89□□□□□ -1.31
HMGB2-202ENST00000438704 KLRF1Q9NZS2 232 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 PPP4R1LQ9P1A2 415 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 ERGIC3Q9Y282 383 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 MRPS18CQ9Y3D5 142 aaKnown RBP6.89□□□□□ -1.31
HMGB2-202ENST00000438704 CNTRLQ7Z7A1 2325 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 ZNF292O60281 2723 aa6.89□□□□□ -1.31
HMGB2-202ENST00000438704 DMDP11532 3685 aa6.88□□□□□ -1.31
HMGB2-202ENST00000438704 WDR87Q6ZQQ6 2873 aa6.88□□□□□ -1.31
HMGB2-202ENST00000438704 PTPRZ1P23471 2315 aaPredicted RBP6.88□□□□□ -1.31
HMGB2-202ENST00000438704 DOCK10Q96BY6 2186 aa6.88□□□□□ -1.31
HMGB2-202ENST00000438704 LOC101059948A0A1B0GTJ6 334 aa6.88□□□□□ -1.31
HMGB2-202ENST00000438704 LOC102725191A0A1B0GVB3 256 aa6.88□□□□□ -1.31
HMGB2-202ENST00000438704 SPAARA0A1B0GVQ0 90 aa6.88□□□□□ -1.31
HMGB2-202ENST00000438704 CCDC182A6NF36 153 aa6.88□□□□□ -1.31
HMGB2-202ENST00000438704 C17orf51A8MQB3 221 aa6.88□□□□□ -1.31
HMGB2-202ENST00000438704 MCIDASD6RGH6 385 aa6.88□□□□□ -1.31
HMGB2-202ENST00000438704 PRR23D1E9PI22 279 aaPredicted RBP6.88□□□□□ -1.31
HMGB2-202ENST00000438704 SLC30A4O14863 429 aa6.88□□□□□ -1.31
HMGB2-202ENST00000438704 TRIM3O75382 744 aaPredicted RBP6.88□□□□□ -1.31
HMGB2-202ENST00000438704 SLC25A12O75746 678 aa6.88□□□□□ -1.31
HMGB2-202ENST00000438704 AHSA1O95433 338 aa6.88□□□□□ -1.31
HMGB2-202ENST00000438704 PTHP01270 115 aa6.88□□□□□ -1.31
HMGB2-202ENST00000438704 SCG5P05408 212 aa6.88□□□□□ -1.31
HMGB2-202ENST00000438704 LCKP06239 509 aa6.88□□□□□ -1.31
HMGB2-202ENST00000438704 CELA2AP08217 269 aa6.88□□□□□ -1.31
HMGB2-202ENST00000438704 PRR23D2P0DMB1 279 aaPredicted RBP6.88□□□□□ -1.31
HMGB2-202ENST00000438704 MED14OSP0DP75 135 aa6.88□□□□□ -1.31
HMGB2-202ENST00000438704 ZNF17P17021 662 aa6.88□□□□□ -1.31
HMGB2-202ENST00000438704 PAICSP22234 425 aaKnown RBP6.88□□□□□ -1.31
HMGB2-202ENST00000438704 RBMS1P29558 406 aaKnown RBP6.88□□□□□ -1.31
HMGB2-202ENST00000438704 SDHAP31040 664 aa6.88□□□□□ -1.31
HMGB2-202ENST00000438704 OTX2P32243 289 aa6.88□□□□□ -1.31
HMGB2-202ENST00000438704 TGFBR2P37173 567 aa6.88□□□□□ -1.31
HMGB2-202ENST00000438704 ZNF41P51814 821 aaPredicted RBP6.88□□□□□ -1.31
HMGB2-202ENST00000438704 RPS18P62269 152 aaKnown RBP6.88□□□□□ -1.31
HMGB2-202ENST00000438704 BDH1Q02338 343 aa6.88□□□□□ -1.31
HMGB2-202ENST00000438704 RPL18Q07020 188 aaKnown RBP6.88□□□□□ -1.31
HMGB2-202ENST00000438704 MLLT11Q13015 90 aaPredicted RBP6.88□□□□□ -1.31
HMGB2-202ENST00000438704 AIMP2Q13155 320 aaKnown RBP6.88□□□□□ -1.31
HMGB2-202ENST00000438704 SELENBP1Q13228 472 aa6.88□□□□□ -1.31
HMGB2-202ENST00000438704 RTP5Q14D33 572 aa6.88□□□□□ -1.31
HMGB2-202ENST00000438704 CTF1Q16619 201 aa6.88□□□□□ -1.31
HMGB2-202ENST00000438704 TIGD6Q17RP2 521 aa6.88□□□□□ -1.31
HMGB2-202ENST00000438704 ACER2Q5QJU3 275 aa6.88□□□□□ -1.31
HMGB2-202ENST00000438704 DCAF10Q5QP82 559 aa6.88□□□□□ -1.31
HMGB2-202ENST00000438704 GPR107Q5VW38 600 aa6.88□□□□□ -1.31
HMGB2-202ENST00000438704 TIGD3Q6B0B8 471 aa6.88□□□□□ -1.31
HMGB2-202ENST00000438704 CCDC81Q6ZN84 652 aa6.88□□□□□ -1.31
HMGB2-202ENST00000438704 GDPGP1Q6ZNW5 385 aa6.88□□□□□ -1.31
HMGB2-202ENST00000438704 LINC00299Q6ZSB3 139 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms