RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 PRR32B1ATL7 298 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 C2CD4DB7Z1M9 353 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 PRSS44E7EML9 344 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 F5H6K3 240 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 H0YIZ8 118 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 hCG_2039718K7EN88 272 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 M0R036 132 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 SULT1C2O00338 296 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 MAGEB4O15481 346 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 TGOLN2O43493 480 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 MAGEC1O60732 1142 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 RNASEH1O60930 286 aaKnown RBP3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 KHDRBS3O75525 346 aaKnown RBP3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 RFPL2O75678 378 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 CEACAM4O75871 244 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 KRT33AO76009 404 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 TOXO94900 526 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 GJB5O95377 273 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 UTS2O95399 124 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 C1orf105O95561 183 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 UMODP07911 640 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 HOXC6P09630 235 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 NPSP0C0P6 89 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 DPEP1P16444 411 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 MAGEA3P43357 314 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 QARSP47897 775 aaKnown RBP3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 TMED10P49755 219 aaKnown RBP3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 TMEM33P57088 247 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 TMPRSS3P57727 454 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 CX3CL1P78423 397 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 KLC1Q07866 573 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 AESQ08117 197 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 AQP6Q13520 282 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 ITGA9Q13797 1035 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 DAZAP2Q15038 168 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 PON3Q15166 354 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 SLC9A3R2Q15599 337 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 DUOXA1Q1HG43 343 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 ALG10Q5BKT4 473 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 ALG10BQ5I7T1 473 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 GCSAMLQ5JQS6 135 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 IRAK1BP1Q5VVH5 260 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 PLPP4Q5VZY2 271 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 ANKRD26P1Q6NSI1 321 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 ACSM5Q6NUN0 579 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 TMEM65Q6PI78 240 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 DHRS11Q6UWP2 260 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 LRRC31Q6UY01 552 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 CCDC121Q6ZUS5 278 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 S100A7AQ86SG5 101 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 C17orf64Q86WR6 236 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 CALHM1Q8IU99 346 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 TMEM139Q8IV31 216 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 NAXDQ8IW45 347 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 UEVLDQ8IX04 471 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 SLC35F2Q8IXU6 374 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 PUSL1Q8N0Z8 303 aaKnown RBP3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 CENPSQ8N2Z9 138 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 RIBC1Q8N443 379 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 CATSPER1Q8NEC5 780 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 OR10A7Q8NGE5 316 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 OR10J5Q8NHC4 309 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 DYNC2LI1Q8TCX1 351 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 ACTRT1Q8TDG2 376 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 GPR148Q8TDV2 347 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 SMAP2Q8WU79 429 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 GTF3AQ92664 365 aaKnown RBP3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 NEIL2Q969S2 332 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 UBE2E3Q969T4 207 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 CREB3L1Q96BA8 519 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 YIPF6Q96EC8 236 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 CENPNQ96H22 339 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 FCRL5Q96RD9 977 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 TEAD3Q99594 435 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 IL12RB2Q99665 862 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 DCTN5Q9BTE1 182 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 ELOVL4Q9GZR5 314 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 NXF5Q9H1B4 397 aaKnown RBP3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 ALG9Q9H6U8 611 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 XPNPEP1Q9NQW7 623 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 INTS9Q9NV88 658 aaKnown RBP3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 GID8Q9NWU2 228 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 CMTM6Q9NX76 183 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 B4GALT7Q9UBV7 327 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 PDE10AQ9Y233 779 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 AK6Q9Y3D8 172 aaKnown RBP3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 CSNK1G3Q9Y6M4 447 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 WDR17Q8IZU2 1322 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 FGD5Q6ZNL6 1462 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 EIF3AQ14152 1382 aaKnown RBP3.14□□□□□ -1.91
HMGB1P12-201ENST00000438594 RAB3GAP2Q9H2M9 1393 aa3.14□□□□□ -1.91
HMGB1P12-201ENST00000438594 TEX13DA0A0J9YY54 714 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P12-201ENST00000438594 PSMB11A5LHX3 300 aa3.14□□□□□ -1.91
HMGB1P12-201ENST00000438594 TVP23AA6NH52 213 aa3.14□□□□□ -1.91
HMGB1P12-201ENST00000438594 C2orf74A8MZ97 194 aa3.14□□□□□ -1.91
HMGB1P12-201ENST00000438594 H0Y980 276 aa3.14□□□□□ -1.91
HMGB1P12-201ENST00000438594 TMEM178BH3BS89 294 aa3.14□□□□□ -1.91
HMGB1P12-201ENST00000438594 DCTN6O00399 190 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms