RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 EIF3MQ7L2H7 374 aaKnown RBP7.54□□□□□ -1.2
TRIM39-206ENST00000420746 ZNF627Q7L945 461 aa7.54□□□□□ -1.2
TRIM39-206ENST00000420746 GPAT4Q86UL3 456 aa7.54□□□□□ -1.2
TRIM39-206ENST00000420746 LDLRAD3Q86YD5 345 aa7.54□□□□□ -1.2
TRIM39-206ENST00000420746 TMEM139Q8IV31 216 aa7.54□□□□□ -1.2
TRIM39-206ENST00000420746 TMEM99Q8N816 258 aa7.54□□□□□ -1.2
TRIM39-206ENST00000420746 CDC26Q8NHZ8 85 aa7.54□□□□□ -1.2
TRIM39-206ENST00000420746 ZNF563Q8TA94 476 aa7.54□□□□□ -1.2
TRIM39-206ENST00000420746 MUC7Q8TAX7 377 aa7.54□□□□□ -1.2
TRIM39-206ENST00000420746 SYNPRQ8TBG9 265 aa7.54□□□□□ -1.2
TRIM39-206ENST00000420746 NEURL3Q96EH8 262 aa7.54□□□□□ -1.2
TRIM39-206ENST00000420746 THOC1Q96FV9 657 aaKnown RBP7.54□□□□□ -1.2
TRIM39-206ENST00000420746 OTUB1Q96FW1 271 aaPredicted RBP7.54□□□□□ -1.2
TRIM39-206ENST00000420746 GPR78Q96P69 363 aa7.54□□□□□ -1.2
TRIM39-206ENST00000420746 GPR35Q9HC97 309 aa7.54□□□□□ -1.2
TRIM39-206ENST00000420746 FBLN5Q9UBX5 448 aa7.54□□□□□ -1.2
TRIM39-206ENST00000420746 RYR1P21817 5038 aa7.54□□□□□ -1.2
TRIM39-206ENST00000420746 TMED7-TICAM2A0A0A6YYA0 188 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 TCRBV9S1A1TA0A576 114 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 FAM187AA6NFU0 413 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 LIPT2A6NK58 231 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 E9PQ18 207 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 PPP6CO00743 305 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 SLC43A1O75387 559 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 CYP7B1O75881 506 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 OR4F21O95013 312 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 AKR7A3O95154 331 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 HLA-HP01893 362 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 C2P06681 752 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 UBTFL6P0CB48 400 aaPredicted RBP7.53□□□□□ -1.2
TRIM39-206ENST00000420746 UQCRC2P22695 453 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 PGM1P36871 562 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 TGFBR2P37173 567 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 IER3P46695 156 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 PTDSS1P48651 473 aaKnown RBP7.53□□□□□ -1.2
TRIM39-206ENST00000420746 MMP16P51512 607 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 P2RY4P51582 365 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 EMX1Q04741 257 aaPredicted RBP7.53□□□□□ -1.2
TRIM39-206ENST00000420746 LASP1Q14847 261 aaKnown RBP7.53□□□□□ -1.2
TRIM39-206ENST00000420746 TSTQ16762 297 aaKnown RBP7.53□□□□□ -1.2
TRIM39-206ENST00000420746 CEACAM16Q2WEN9 425 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 TMEM225Q6GV28 225 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 EMBQ6PCB8 327 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 C6orf89Q6UWU4 347 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 FRRS1Q6ZNA5 592 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 LRRC28Q86X40 367 aaPredicted RBP7.53□□□□□ -1.2
TRIM39-206ENST00000420746 EPHX4Q8IUS5 362 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 DDIASQ8IXT1 998 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 WFDC9Q8NEX5 89 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 ZNF519Q8TB69 540 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 RAB40AQ8WXH6 277 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 C11orf40Q8WZ69 217 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 FAM120BQ96EK7 910 aaKnown RBP7.53□□□□□ -1.2
TRIM39-206ENST00000420746 CHMP6Q96FZ7 201 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 TSPAN32Q96QS1 320 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 EGLN1Q9GZT9 426 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 DPAGT1Q9H3H5 408 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 TMEM165Q9HC07 324 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 EXOSC3Q9NQT5 275 aaKnown RBP7.53□□□□□ -1.2
TRIM39-206ENST00000420746 ZCCHC3Q9NUD5 404 aaKnown RBP7.53□□□□□ -1.2
TRIM39-206ENST00000420746 EGFL7Q9UHF1 273 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 RASD1Q9Y272 281 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 SLC35A3Q9Y2D2 325 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.53□□□□□ -1.2
TRIM39-206ENST00000420746 TMED7Q9Y3B3 224 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 DNAH7Q8WXX0 4024 aa7.53□□□□□ -1.2
TRIM39-206ENST00000420746 KIR2DS1A0A191URI9 304 aa7.52□□□□□ -1.21
TRIM39-206ENST00000420746 WI2-2373I1.2A0A1W2PRP0 233 aa7.52□□□□□ -1.21
TRIM39-206ENST00000420746 TMEM72A0PK05 275 aa7.52□□□□□ -1.21
TRIM39-206ENST00000420746 NPIPB8E9PQR5 432 aa7.52□□□□□ -1.21
TRIM39-206ENST00000420746 RAB36O95755 333 aa7.52□□□□□ -1.21
TRIM39-206ENST00000420746 AK1P00568 194 aa7.52□□□□□ -1.21
TRIM39-206ENST00000420746 IGHV1-46P01743 117 aa7.52□□□□□ -1.21
TRIM39-206ENST00000420746 IGHV3-13P01766 116 aa7.52□□□□□ -1.21
TRIM39-206ENST00000420746 IGHV4-59P01825 116 aa7.52□□□□□ -1.21
TRIM39-206ENST00000420746 RBP1P09455 135 aa7.52□□□□□ -1.21
TRIM39-206ENST00000420746 SBK2P0C263 348 aa7.52□□□□□ -1.21
TRIM39-206ENST00000420746 CD79AP11912 226 aa7.52□□□□□ -1.21
TRIM39-206ENST00000420746 CRHR1P34998 444 aa7.52□□□□□ -1.21
TRIM39-206ENST00000420746 ZNF81P51508 661 aa7.52□□□□□ -1.21
TRIM39-206ENST00000420746 POLR2HP52434 150 aaKnown RBP7.52□□□□□ -1.21
TRIM39-206ENST00000420746 CDK5R2Q13319 367 aa7.52□□□□□ -1.21
TRIM39-206ENST00000420746 CEACAM7Q14002 265 aa7.52□□□□□ -1.21
TRIM39-206ENST00000420746 COX20Q5RI15 118 aa7.52□□□□□ -1.21
TRIM39-206ENST00000420746 PGBD2Q6P3X8 592 aa7.52□□□□□ -1.21
TRIM39-206ENST00000420746 GPR137CQ8N3F9 429 aa7.52□□□□□ -1.21
TRIM39-206ENST00000420746 OR4F17Q8NGA8 305 aa7.52□□□□□ -1.21
TRIM39-206ENST00000420746 KIF18AQ8NI77 898 aa7.52□□□□□ -1.21
TRIM39-206ENST00000420746 CIDECQ96AQ7 238 aaPredicted RBP7.52□□□□□ -1.21
TRIM39-206ENST00000420746 OR4F4Q96R69 305 aa7.52□□□□□ -1.21
TRIM39-206ENST00000420746 TBX15Q96SF7 602 aa7.52□□□□□ -1.21
TRIM39-206ENST00000420746 ZNF382Q96SR6 550 aa7.52□□□□□ -1.21
TRIM39-206ENST00000420746 SSBP3Q9BWW4 388 aaPredicted RBP7.52□□□□□ -1.21
TRIM39-206ENST00000420746 CENPHQ9H3R5 247 aa7.52□□□□□ -1.21
TRIM39-206ENST00000420746 NANOGQ9H9S0 305 aa7.52□□□□□ -1.21
TRIM39-206ENST00000420746 A4GALTQ9NPC4 353 aa7.52□□□□□ -1.21
TRIM39-206ENST00000420746 KIF17Q9P2E2 1029 aa7.52□□□□□ -1.21
TRIM39-206ENST00000420746 KCNE5Q9UJ90 142 aa7.52□□□□□ -1.21
TRIM39-206ENST00000420746 OSGIN1Q9UJX0 560 aa7.52□□□□□ -1.21
TRIM39-206ENST00000420746 USH1CQ9Y6N9 552 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms