RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 ZNF175Q9Y473 711 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 SLC22A20A6NK97 555 aa11.13□□□□□ -0.63
TMEM53-206ENST00000420706 ZNF716A6NP11 495 aa11.13□□□□□ -0.63
TMEM53-206ENST00000420706 ZAR1LA6NP61 321 aa11.13□□□□□ -0.63
TMEM53-206ENST00000420706 BHLHE40O14503 412 aa11.13□□□□□ -0.63
TMEM53-206ENST00000420706 PRRG2O14669 202 aa11.13□□□□□ -0.63
TMEM53-206ENST00000420706 CD14P08571 375 aa11.13□□□□□ -0.63
TMEM53-206ENST00000420706 HOXD4P09016 255 aaPredicted RBP11.13□□□□□ -0.63
TMEM53-206ENST00000420706 PTGER4P35408 488 aa11.13□□□□□ -0.63
TMEM53-206ENST00000420706 RPL4P36578 427 aaKnown RBP11.13□□□□□ -0.63
TMEM53-206ENST00000420706 RASGEF1BQ0VAM2 473 aa11.13□□□□□ -0.63
TMEM53-206ENST00000420706 PDK3Q15120 406 aa11.13□□□□□ -0.63
TMEM53-206ENST00000420706 POU4F3Q15319 338 aa11.13□□□□□ -0.63
TMEM53-206ENST00000420706 ACSF3Q4G176 576 aaPredicted RBP11.13□□□□□ -0.63
TMEM53-206ENST00000420706 CLEC12AQ5QGZ9 265 aa11.13□□□□□ -0.63
TMEM53-206ENST00000420706 TMEM236Q5W0B7 351 aa11.13□□□□□ -0.63
TMEM53-206ENST00000420706 NSUN5P2Q63ZY6 315 aa11.13□□□□□ -0.63
TMEM53-206ENST00000420706 GTF2IRD2BQ6EKJ0 949 aa11.13□□□□□ -0.63
TMEM53-206ENST00000420706 IZUMO2Q6UXV1 221 aa11.13□□□□□ -0.63
TMEM53-206ENST00000420706 GPAT4Q86UL3 456 aa11.13□□□□□ -0.63
TMEM53-206ENST00000420706 GTF2IRD2Q86UP8 949 aa11.13□□□□□ -0.63
TMEM53-206ENST00000420706 DOLPP1Q86YN1 238 aa11.13□□□□□ -0.63
TMEM53-206ENST00000420706 UEVLDQ8IX04 471 aa11.13□□□□□ -0.63
TMEM53-206ENST00000420706 DHRSXQ8N5I4 330 aa11.13□□□□□ -0.63
TMEM53-206ENST00000420706 ANKK1Q8NFD2 765 aa11.13□□□□□ -0.63
TMEM53-206ENST00000420706 OR52L1Q8NGH7 329 aa11.13□□□□□ -0.63
TMEM53-206ENST00000420706 OR4Q3Q8NH05 313 aa11.13□□□□□ -0.63
TMEM53-206ENST00000420706 RNF128Q8TEB7 428 aa11.13□□□□□ -0.63
TMEM53-206ENST00000420706 ZNF570Q96NI8 536 aa11.13□□□□□ -0.63
TMEM53-206ENST00000420706 IFT27Q9BW83 186 aa11.13□□□□□ -0.63
TMEM53-206ENST00000420706 SLC25A19Q9HC21 320 aa11.13□□□□□ -0.63
TMEM53-206ENST00000420706 ZNF346Q9UL40 294 aaKnown RBP11.13□□□□□ -0.63
TMEM53-206ENST00000420706 NOX1Q9Y5S8 564 aa11.13□□□□□ -0.63
TMEM53-206ENST00000420706 IER3IP1Q9Y5U9 82 aa11.13□□□□□ -0.63
TMEM53-206ENST00000420706 PIEZO2Q9H5I5 2752 aa11.13□□□□□ -0.63
TMEM53-206ENST00000420706 SHANK1Q9Y566 2161 aa11.13□□□□□ -0.63
TMEM53-206ENST00000420706 SVILO95425 2214 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 LOC100130705A0A1B0GUX0 176 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 CD8B2A6NJW9 211 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 FIGNL2A6NMB9 653 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 IMPA2O14732 288 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 ARPC3O15145 178 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 SLC16A6O15403 523 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 SLC19A2O60779 497 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 SERPINI2O75830 405 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 PPP1R3DO95685 299 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 PLGP00747 810 aaPredicted RBP11.12□□□□□ -0.63
TMEM53-206ENST00000420706 APEHP13798 732 aaKnown RBP11.12□□□□□ -0.63
TMEM53-206ENST00000420706 ZNF43P17038 809 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 ACVR2AP27037 513 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 SLC16A1P53985 500 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 ERVK-25P63136 954 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 ADARB1P78563 741 aaKnown RBP11.12□□□□□ -0.63
TMEM53-206ENST00000420706 C1orf185Q5T7R7 199 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 SLX4IPQ5VYV7 408 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 SLC27A4Q6P1M0 643 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 RPTNQ6XPR3 784 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 SEM1Q6ZVN7 128 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 CREB3L2Q70SY1 520 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 SLC35D2Q76EJ3 337 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 FAM122BQ7Z309 247 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 P4HA3Q7Z4N8 544 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 LNX2Q8N448 690 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 IQCF1Q8N6M8 205 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 ZIC4Q8N9L1 334 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 ZNF555Q8NEP9 628 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 OR2T33Q8NG76 320 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 OR9K2Q8NGE7 335 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 ABHD3Q8WU67 409 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 WNT2BQ93097 391 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 TXNDC15Q96J42 360 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 HRASLS5Q96KN8 279 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 ERMAPQ96PL5 475 aaPredicted RBP11.12□□□□□ -0.63
TMEM53-206ENST00000420706 TACO1Q9BSH4 297 aaKnown RBP11.12□□□□□ -0.63
TMEM53-206ENST00000420706 ADI1Q9BV57 179 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 KATNB1Q9BVA0 655 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 NDEL1Q9GZM8 345 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 TP63Q9H3D4 680 aaPredicted RBP11.12□□□□□ -0.63
TMEM53-206ENST00000420706 TXNIPQ9H3M7 391 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 RNF122Q9H9V4 155 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 BAIAP2Q9UQB8 552 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 FAM215AQ9Y5M1 114 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 ZGRF1Q86YA3 2104 aa11.12□□□□□ -0.63
TMEM53-206ENST00000420706 IGKV3D-15A0A087WSY6 115 aa11.11□□□□□ -0.63
TMEM53-206ENST00000420706 A0A1W2PRG6 482 aa11.11□□□□□ -0.63
TMEM53-206ENST00000420706 MBD3L4A6NDZ8 208 aaPredicted RBP11.11□□□□□ -0.63
TMEM53-206ENST00000420706 MBD3L3A6NE82 208 aaPredicted RBP11.11□□□□□ -0.63
TMEM53-206ENST00000420706 MBD3L5A6NJ08 208 aaPredicted RBP11.11□□□□□ -0.63
TMEM53-206ENST00000420706 NPIPB13A6NJU9 1138 aa11.11□□□□□ -0.63
TMEM53-206ENST00000420706 B8ZZF3 427 aa11.11□□□□□ -0.63
TMEM53-206ENST00000420706 NPIPB4C9JG80 1138 aa11.11□□□□□ -0.63
TMEM53-206ENST00000420706 H0YAE9 185 aa11.11□□□□□ -0.63
TMEM53-206ENST00000420706 TRAF3IP2O43734 574 aaPredicted RBP11.11□□□□□ -0.63
TMEM53-206ENST00000420706 IDH3BO43837 385 aa11.11□□□□□ -0.63
TMEM53-206ENST00000420706 TXNDC12O95881 172 aa11.11□□□□□ -0.63
TMEM53-206ENST00000420706 BCL10O95999 233 aa11.11□□□□□ -0.63
TMEM53-206ENST00000420706 IGHMP01871 453 aa11.11□□□□□ -0.63
TMEM53-206ENST00000420706 FCGR2AP12318 317 aa11.11□□□□□ -0.63
TMEM53-206ENST00000420706 IFNGR1P15260 489 aa11.11□□□□□ -0.63
TMEM53-206ENST00000420706 GRK5P34947 590 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms