RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 IL1RL1Q01638 556 aa15.33■□□□□ 0.04
PDLIM2-208ENST00000416159 RBBP4Q09028 425 aa15.33■□□□□ 0.04
PDLIM2-208ENST00000416159 RANBP3LQ86VV4 465 aaPredicted RBP15.33■□□□□ 0.04
PDLIM2-208ENST00000416159 GPR137CQ8N3F9 429 aa15.33■□□□□ 0.04
PDLIM2-208ENST00000416159 FAM169BQ8N8A8 192 aa15.33■□□□□ 0.04
PDLIM2-208ENST00000416159 PIK3C3Q8NEB9 887 aa15.33■□□□□ 0.04
PDLIM2-208ENST00000416159 KLHL14Q9P2G3 628 aa15.33■□□□□ 0.04
PDLIM2-208ENST00000416159 TRIM33Q9UPN9 1127 aa15.33■□□□□ 0.04
PDLIM2-208ENST00000416159 NDUFAF1Q9Y375 327 aa15.33■□□□□ 0.04
PDLIM2-208ENST00000416159 CORINQ9Y5Q5 1042 aa15.33■□□□□ 0.04
PDLIM2-208ENST00000416159 A0A096LPE4 126 aa15.32■□□□□ 0.04
PDLIM2-208ENST00000416159 A0A1W2PPZ6 126 aa15.32■□□□□ 0.04
PDLIM2-208ENST00000416159 KIAA1324LA8MWY0 1029 aaPredicted RBP15.32■□□□□ 0.04
PDLIM2-208ENST00000416159 MFN2O95140 757 aa15.32■□□□□ 0.04
PDLIM2-208ENST00000416159 CSF3P09919 207 aa15.32■□□□□ 0.04
PDLIM2-208ENST00000416159 SLC25A16P16260 332 aa15.32■□□□□ 0.04
PDLIM2-208ENST00000416159 CBLP22681 906 aa15.32■□□□□ 0.04
PDLIM2-208ENST00000416159 AQP1P29972 269 aa15.32■□□□□ 0.04
PDLIM2-208ENST00000416159 ARF1P84077 181 aaKnown RBP15.32■□□□□ 0.04
PDLIM2-208ENST00000416159 SWI5Q1ZZU3 235 aa15.32■□□□□ 0.04
PDLIM2-208ENST00000416159 DHDDSQ86SQ9 333 aa15.32■□□□□ 0.04
PDLIM2-208ENST00000416159 UEVLDQ8IX04 471 aa15.32■□□□□ 0.04
PDLIM2-208ENST00000416159 DPP10Q8N608 796 aa15.32■□□□□ 0.04
PDLIM2-208ENST00000416159 C11orf65Q8NCR3 313 aa15.32■□□□□ 0.04
PDLIM2-208ENST00000416159 TSPEARQ8WU66 669 aa15.32■□□□□ 0.04
PDLIM2-208ENST00000416159 FAM168AQ92567 244 aa15.32■□□□□ 0.04
PDLIM2-208ENST00000416159 FBXO17Q96EF6 278 aa15.32■□□□□ 0.04
PDLIM2-208ENST00000416159 SLC41A3Q96GZ6 507 aa15.32■□□□□ 0.04
PDLIM2-208ENST00000416159 ANKRD27Q96NW4 1050 aa15.32■□□□□ 0.04
PDLIM2-208ENST00000416159 CGREF1Q99674 301 aa15.32■□□□□ 0.04
PDLIM2-208ENST00000416159 ASPNQ9BXN1 380 aa15.32■□□□□ 0.04
PDLIM2-208ENST00000416159 NELFAQ9H3P2 528 aa15.32■□□□□ 0.04
PDLIM2-208ENST00000416159 VIPAS39Q9H9C1 493 aa15.32■□□□□ 0.04
PDLIM2-208ENST00000416159 GPR35Q9HC97 309 aa15.32■□□□□ 0.04
PDLIM2-208ENST00000416159 YAE1D1Q9NRH1 226 aa15.32■□□□□ 0.04
PDLIM2-208ENST00000416159 MS4A18H0YCH9 400 aa15.31■□□□□ 0.04
PDLIM2-208ENST00000416159 ANGPT2O15123 496 aa15.31■□□□□ 0.04
PDLIM2-208ENST00000416159 TRAF3IP2O43734 574 aaPredicted RBP15.31■□□□□ 0.04
PDLIM2-208ENST00000416159 TPST2O60704 377 aa15.31■□□□□ 0.04
PDLIM2-208ENST00000416159 IGLV1-44P01699 117 aa15.31■□□□□ 0.04
PDLIM2-208ENST00000416159 BGLAPP02818 100 aa15.31■□□□□ 0.04
PDLIM2-208ENST00000416159 NQO1P15559 274 aaKnown RBP15.31■□□□□ 0.04
PDLIM2-208ENST00000416159 CBR1P16152 277 aa15.31■□□□□ 0.04
PDLIM2-208ENST00000416159 TUBA1BP68363 451 aa15.31■□□□□ 0.04
PDLIM2-208ENST00000416159 TUBA4AP68366 448 aa15.31■□□□□ 0.04
PDLIM2-208ENST00000416159 NAAAQ02083 359 aa15.31■□□□□ 0.04
PDLIM2-208ENST00000416159 LOXL1Q08397 574 aaPredicted RBP15.31■□□□□ 0.04
PDLIM2-208ENST00000416159 MST1LQ2TV78 715 aa15.31■□□□□ 0.04
PDLIM2-208ENST00000416159 MS4A18Q3C1V0 323 aa15.31■□□□□ 0.04
PDLIM2-208ENST00000416159 SWT1Q5T5J6 900 aaKnown RBP15.31■□□□□ 0.04
PDLIM2-208ENST00000416159 TUBA1AQ71U36 451 aa15.31■□□□□ 0.04
PDLIM2-208ENST00000416159 PTOV1Q86YD1 416 aa15.31■□□□□ 0.04
PDLIM2-208ENST00000416159 CCDC36Q8IYA8 594 aa15.31■□□□□ 0.04
PDLIM2-208ENST00000416159 ZNF525Q8N782 197 aa15.31■□□□□ 0.04
PDLIM2-208ENST00000416159 SCAIQ8N9R8 606 aa15.31■□□□□ 0.04
PDLIM2-208ENST00000416159 HTRA1Q92743 480 aa15.31■□□□□ 0.04
PDLIM2-208ENST00000416159 THOC1Q96FV9 657 aaKnown RBP15.31■□□□□ 0.04
PDLIM2-208ENST00000416159 OR2M2Q96R28 347 aa15.31■□□□□ 0.04
PDLIM2-208ENST00000416159 TNFRSF13CQ96RJ3 184 aa15.31■□□□□ 0.04
PDLIM2-208ENST00000416159 TMEM43Q9BTV4 400 aa15.31■□□□□ 0.04
PDLIM2-208ENST00000416159 CRLF2Q9HC73 371 aa15.31■□□□□ 0.04
PDLIM2-208ENST00000416159 A0A096LNT2 108 aa15.3■□□□□ 0.04
PDLIM2-208ENST00000416159 M0QX08 132 aa15.3■□□□□ 0.04
PDLIM2-208ENST00000416159 FMO6PO60774 539 aa15.3■□□□□ 0.04
PDLIM2-208ENST00000416159 PDE5AO76074 875 aa15.3■□□□□ 0.04
PDLIM2-208ENST00000416159 F12P00748 615 aaPredicted RBP15.3■□□□□ 0.04
PDLIM2-208ENST00000416159 IGKV3-15P01624 115 aa15.3■□□□□ 0.04
PDLIM2-208ENST00000416159 C8BP07358 591 aa15.3■□□□□ 0.04
PDLIM2-208ENST00000416159 CECR9P0C854 216 aa15.3■□□□□ 0.04
PDLIM2-208ENST00000416159 SERPINF1P36955 418 aa15.3■□□□□ 0.04
PDLIM2-208ENST00000416159 CDH12P55289 794 aa15.3■□□□□ 0.04
PDLIM2-208ENST00000416159 PCBP3P57721 371 aaKnown RBP15.3■□□□□ 0.04
PDLIM2-208ENST00000416159 SNRPD2P62316 118 aaKnown RBP15.3■□□□□ 0.04
PDLIM2-208ENST00000416159 CYP51A1Q16850 503 aa15.3■□□□□ 0.04
PDLIM2-208ENST00000416159 CEACAM16Q2WEN9 425 aa15.3■□□□□ 0.04
PDLIM2-208ENST00000416159 ZNF613Q6PF04 617 aa15.3■□□□□ 0.04
PDLIM2-208ENST00000416159 SLC30A8Q8IWU4 369 aa15.3■□□□□ 0.04
PDLIM2-208ENST00000416159 TMEM123Q8N131 208 aa15.3■□□□□ 0.04
PDLIM2-208ENST00000416159 SMYD1Q8NB12 490 aa15.3■□□□□ 0.04
PDLIM2-208ENST00000416159 OR4F15Q8NGB8 312 aa15.3■□□□□ 0.04
PDLIM2-208ENST00000416159 PROX1Q92786 737 aa15.3■□□□□ 0.04
PDLIM2-208ENST00000416159 LRR1Q96L50 414 aa15.3■□□□□ 0.04
PDLIM2-208ENST00000416159 MCHR1Q99705 422 aa15.3■□□□□ 0.04
PDLIM2-208ENST00000416159 WFDC6Q9BQY6 131 aa15.3■□□□□ 0.04
PDLIM2-208ENST00000416159 SIKE1Q9BRV8 207 aa15.3■□□□□ 0.04
PDLIM2-208ENST00000416159 ZNF385DQ9H6B1 395 aa15.3■□□□□ 0.04
PDLIM2-208ENST00000416159 CA10Q9NS85 328 aa15.3■□□□□ 0.04
PDLIM2-208ENST00000416159 ARGLU1Q9NWB6 273 aaPredicted RBP15.3■□□□□ 0.04
PDLIM2-208ENST00000416159 MRPL39Q9NYK5 338 aaKnown RBP15.3■□□□□ 0.04
PDLIM2-208ENST00000416159 ADAM21Q9UKJ8 722 aa15.3■□□□□ 0.04
PDLIM2-208ENST00000416159 VSTM5A8MXK1 200 aa15.29■□□□□ 0.04
PDLIM2-208ENST00000416159 ZNF99A8MXY4 864 aaPredicted RBP15.29■□□□□ 0.04
PDLIM2-208ENST00000416159 B9A039 149 aa15.29■□□□□ 0.04
PDLIM2-208ENST00000416159 GPRIN2O60269 458 aa15.29■□□□□ 0.04
PDLIM2-208ENST00000416159 EDF1O60869 148 aaKnown RBP15.29■□□□□ 0.04
PDLIM2-208ENST00000416159 ARR3P36575 388 aa15.29■□□□□ 0.04
PDLIM2-208ENST00000416159 PMS2P3Q13401 168 aa15.29■□□□□ 0.04
PDLIM2-208ENST00000416159 NFYCQ13952 458 aa15.29■□□□□ 0.04
PDLIM2-208ENST00000416159 DUSP7Q16829 419 aa15.29■□□□□ 0.04
PDLIM2-208ENST00000416159 METTL21CQ5VZV1 264 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms