RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 GPAT4Q86UL3 456 aa12.35□□□□□ -0.43
GYPC-203ENST00000409836 P2RY8Q86VZ1 359 aa12.35□□□□□ -0.43
GYPC-203ENST00000409836 CYP4Z1Q86W10 505 aa12.35□□□□□ -0.43
GYPC-203ENST00000409836 CXorf67Q86X51 503 aaPredicted RBP12.35□□□□□ -0.43
GYPC-203ENST00000409836 ZNF100Q8IYN0 542 aa12.35□□□□□ -0.43
GYPC-203ENST00000409836 C17orf78Q8N4C9 275 aa12.35□□□□□ -0.43
GYPC-203ENST00000409836 ZNF433Q8N7K0 673 aaPredicted RBP12.35□□□□□ -0.43
GYPC-203ENST00000409836 PFN4Q8NHR9 129 aa12.35□□□□□ -0.43
GYPC-203ENST00000409836 KISS1RQ969F8 398 aaPredicted RBP12.35□□□□□ -0.43
GYPC-203ENST00000409836 SEPHS2Q99611 448 aa12.35□□□□□ -0.43
GYPC-203ENST00000409836 ACTR6Q9GZN1 396 aa12.35□□□□□ -0.43
GYPC-203ENST00000409836 NMNAT1Q9HAN9 279 aaPredicted RBP12.35□□□□□ -0.43
GYPC-203ENST00000409836 SLC7A10Q9NS82 523 aa12.35□□□□□ -0.43
GYPC-203ENST00000409836 C20orf141Q9NUB4 165 aa12.35□□□□□ -0.43
GYPC-203ENST00000409836 ASB6Q9NWX5 421 aa12.35□□□□□ -0.43
GYPC-203ENST00000409836 MED31Q9Y3C7 131 aa12.35□□□□□ -0.43
GYPC-203ENST00000409836 CADP27708 2225 aa12.35□□□□□ -0.43
GYPC-203ENST00000409836 CSMD1Q96PZ7 3565 aa12.34□□□□□ -0.43
GYPC-203ENST00000409836 CCDC168Q8NDH2 2452 aa12.34□□□□□ -0.43
GYPC-203ENST00000409836 A0A087WUU8 490 aa12.34□□□□□ -0.43
GYPC-203ENST00000409836 DEFB108AA8MXU0 73 aa12.34□□□□□ -0.43
GYPC-203ENST00000409836 SIAH2O43255 324 aa12.34□□□□□ -0.43
GYPC-203ENST00000409836 CH25HO95992 272 aa12.34□□□□□ -0.43
GYPC-203ENST00000409836 THBDP07204 575 aa12.34□□□□□ -0.43
GYPC-203ENST00000409836 HOXB6P17509 224 aaKnown RBP12.34□□□□□ -0.43
GYPC-203ENST00000409836 LOXP28300 417 aaPredicted RBP12.34□□□□□ -0.43
GYPC-203ENST00000409836 MSX2P35548 267 aaPredicted RBP12.34□□□□□ -0.43
GYPC-203ENST00000409836 LIMS1P48059 325 aa12.34□□□□□ -0.43
GYPC-203ENST00000409836 TLE4Q04727 773 aa12.34□□□□□ -0.43
GYPC-203ENST00000409836 TRAP1Q12931 704 aaKnown RBP12.34□□□□□ -0.43
GYPC-203ENST00000409836 STK11Q15831 433 aa12.34□□□□□ -0.43
GYPC-203ENST00000409836 EXOC3L2Q2M3D2 409 aa12.34□□□□□ -0.43
GYPC-203ENST00000409836 TSPO2Q5TGU0 170 aa12.34□□□□□ -0.43
GYPC-203ENST00000409836 C22orf34Q6ZV56 151 aa12.34□□□□□ -0.43
GYPC-203ENST00000409836 MBOAT2Q6ZWT7 520 aa12.34□□□□□ -0.43
GYPC-203ENST00000409836 AAED1Q7RTV5 226 aa12.34□□□□□ -0.43
GYPC-203ENST00000409836 RNF217Q8TC41 542 aa12.34□□□□□ -0.43
GYPC-203ENST00000409836 SLC7A13Q8TCU3 470 aa12.34□□□□□ -0.43
GYPC-203ENST00000409836 SGTBQ96EQ0 304 aa12.34□□□□□ -0.43
GYPC-203ENST00000409836 LRR1Q96L50 414 aa12.34□□□□□ -0.43
GYPC-203ENST00000409836 WFIKKN1Q96NZ8 548 aa12.34□□□□□ -0.43
GYPC-203ENST00000409836 OR2M2Q96R28 347 aa12.34□□□□□ -0.43
GYPC-203ENST00000409836 PIP5K1AQ99755 562 aa12.34□□□□□ -0.43
GYPC-203ENST00000409836 BTBD10Q9BSF8 475 aa12.34□□□□□ -0.43
GYPC-203ENST00000409836 FNDC11Q9BVV2 318 aa12.34□□□□□ -0.43
GYPC-203ENST00000409836 RASSF1Q9NS23 344 aa12.34□□□□□ -0.43
GYPC-203ENST00000409836 ZNF226Q9NYT6 803 aa12.34□□□□□ -0.43
GYPC-203ENST00000409836 TAS2R5Q9NYW4 299 aa12.34□□□□□ -0.43
GYPC-203ENST00000409836 C6orf203Q9P0P8 240 aaPredicted RBP12.34□□□□□ -0.43
GYPC-203ENST00000409836 HIF3AQ9Y2N7 669 aa12.34□□□□□ -0.43
GYPC-203ENST00000409836 ROS1P08922 2347 aa12.34□□□□□ -0.43
GYPC-203ENST00000409836 PDE5AO76074 875 aa12.33□□□□□ -0.44
GYPC-203ENST00000409836 ADAP00813 363 aa12.33□□□□□ -0.44
GYPC-203ENST00000409836 IGHMP01871 453 aa12.33□□□□□ -0.44
GYPC-203ENST00000409836 HRGP04196 525 aa12.33□□□□□ -0.44
GYPC-203ENST00000409836 H1F0P07305 194 aaKnown RBP12.33□□□□□ -0.44
GYPC-203ENST00000409836 NQO1P15559 274 aaKnown RBP12.33□□□□□ -0.44
GYPC-203ENST00000409836 PTNP21246 168 aa12.33□□□□□ -0.44
GYPC-203ENST00000409836 MPGP29372 298 aa12.33□□□□□ -0.44
GYPC-203ENST00000409836 SELENOPP49908 381 aa12.33□□□□□ -0.44
GYPC-203ENST00000409836 SH3BGRP55822 239 aaPredicted RBP12.33□□□□□ -0.44
GYPC-203ENST00000409836 MS4A2Q01362 244 aa12.33□□□□□ -0.44
GYPC-203ENST00000409836 PRKCDQ05655 676 aa12.33□□□□□ -0.44
GYPC-203ENST00000409836 PMS2P3Q13401 168 aa12.33□□□□□ -0.44
GYPC-203ENST00000409836 FHL1Q13642 323 aa12.33□□□□□ -0.44
GYPC-203ENST00000409836 TIMM23BQ5SRD1 257 aa12.33□□□□□ -0.44
GYPC-203ENST00000409836 TMPRSS11FQ6ZWK6 438 aa12.33□□□□□ -0.44
GYPC-203ENST00000409836 ZNF627Q7L945 461 aa12.33□□□□□ -0.44
GYPC-203ENST00000409836 BHLHA15Q7RTS1 189 aaPredicted RBP12.33□□□□□ -0.44
GYPC-203ENST00000409836 ABHD12BQ7Z5M8 362 aaPredicted RBP12.33□□□□□ -0.44
GYPC-203ENST00000409836 DHFR2Q86XF0 187 aa12.33□□□□□ -0.44
GYPC-203ENST00000409836 UEVLDQ8IX04 471 aa12.33□□□□□ -0.44
GYPC-203ENST00000409836 LRRC17Q8N6Y2 441 aa12.33□□□□□ -0.44
GYPC-203ENST00000409836 LINC01560Q8TB33 94 aa12.33□□□□□ -0.44
GYPC-203ENST00000409836 S100PBPQ96BU1 408 aa12.33□□□□□ -0.44
GYPC-203ENST00000409836 ZNF775Q96BV0 537 aaPredicted RBP12.33□□□□□ -0.44
GYPC-203ENST00000409836 ADAD1Q96M93 576 aaKnown RBP12.33□□□□□ -0.44
GYPC-203ENST00000409836 MUS81Q96NY9 551 aa12.33□□□□□ -0.44
GYPC-203ENST00000409836 MED18Q9BUE0 208 aa12.33□□□□□ -0.44
GYPC-203ENST00000409836 TMEM5Q9Y2B1 443 aa12.33□□□□□ -0.44
GYPC-203ENST00000409836 MYO9AB2RTY4 2548 aa12.32□□□□□ -0.44
GYPC-203ENST00000409836 OR5H1A6NKK0 313 aa12.32□□□□□ -0.44
GYPC-203ENST00000409836 CENPBD1B2RD01 187 aa12.32□□□□□ -0.44
GYPC-203ENST00000409836 KPNA4O00629 521 aaPredicted RBP12.32□□□□□ -0.44
GYPC-203ENST00000409836 GYG2O15488 501 aa12.32□□□□□ -0.44
GYPC-203ENST00000409836 KLF4O43474 513 aa12.32□□□□□ -0.44
GYPC-203ENST00000409836 ATP5HO75947 161 aa12.32□□□□□ -0.44
GYPC-203ENST00000409836 FABP3P05413 133 aa12.32□□□□□ -0.44
GYPC-203ENST00000409836 HLA-DOBP13765 273 aa12.32□□□□□ -0.44
GYPC-203ENST00000409836 IL32P24001 234 aa12.32□□□□□ -0.44
GYPC-203ENST00000409836 SLC9A3P48764 834 aa12.32□□□□□ -0.44
GYPC-203ENST00000409836 LSM11P83369 360 aaKnown RBP eCLIP12.32□□□□□ -0.44
GYPC-203ENST00000409836 POU3F1Q03052 451 aaPredicted RBP12.32□□□□□ -0.44
GYPC-203ENST00000409836 RPL18Q07020 188 aaKnown RBP12.32□□□□□ -0.44
GYPC-203ENST00000409836 SNTB1Q13884 538 aaKnown RBP12.32□□□□□ -0.44
GYPC-203ENST00000409836 OR7E24Q6IFN5 339 aa12.32□□□□□ -0.44
GYPC-203ENST00000409836 NANOGNBQ7Z5D8 188 aa12.32□□□□□ -0.44
GYPC-203ENST00000409836 NRMQ8IXM6 262 aa12.32□□□□□ -0.44
GYPC-203ENST00000409836 OR6X1Q8NH79 312 aa12.32□□□□□ -0.44
GYPC-203ENST00000409836 MAGEE2Q8TD90 523 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms