RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 KDM8Q8N371 416 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 ANKK1Q8NFD2 765 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 MOSPD2Q8NHP6 518 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 MBD3L2Q8NHZ7 208 aaPredicted RBP10.98□□□□□ -0.65
LINC00339-201ENST00000404210 NRG4Q8WWG1 115 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 ZFP3Q96NJ6 502 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 RDH12Q96NR8 316 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 GPX7Q96SL4 187 aaPredicted RBP10.98□□□□□ -0.65
LINC00339-201ENST00000404210 TTYH2Q9BSA4 534 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 TACO1Q9BSH4 297 aaKnown RBP10.98□□□□□ -0.65
LINC00339-201ENST00000404210 BCO1Q9HAY6 547 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 INIPQ9NRY2 104 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 B3GAT1Q9P2W7 334 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 ORC6Q9Y5N6 252 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 NOX1Q9Y5S8 564 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 CDH10Q9Y6N8 788 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 ITPR1Q14643 2758 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 PHF3Q92576 2039 aaKnown RBP10.97□□□□□ -0.65
LINC00339-201ENST00000404210 A0A1W2PRG6 482 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 NPIPB13A6NJU9 1138 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 KDM4EB2RXH2 506 aaPredicted RBP10.97□□□□□ -0.65
LINC00339-201ENST00000404210 NPIPB4C9JG80 1138 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 E9PLN8 166 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 C11orf98E9PRG8 122 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 H0YJX3 145 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 GPR171O14626 319 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 IMPA2O14732 288 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 MITFO75030 526 aaPredicted RBP10.97□□□□□ -0.65
LINC00339-201ENST00000404210 CRHP06850 196 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 YES1P07947 543 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 CD14P08571 375 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 CDH2P19022 906 aaPredicted RBP10.97□□□□□ -0.65
LINC00339-201ENST00000404210 SLC6A6P31641 620 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 CEACAM8P31997 349 aaPredicted RBP10.97□□□□□ -0.65
LINC00339-201ENST00000404210 GIPRP48546 466 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 PTDSS1P48651 473 aaKnown RBP10.97□□□□□ -0.65
LINC00339-201ENST00000404210 IL1RL1Q01638 556 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 NPRL3Q12980 569 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 EEF1A1P5Q5VTE0 462 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 SEM1Q6ZVN7 128 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 CREB3L2Q70SY1 520 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 GPAT4Q86UL3 456 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 ATCAYQ86WG3 371 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 GALNT4Q8N4A0 578 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 OR9K2Q8NGE7 335 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 GMPPAQ96IJ6 420 aaPredicted RBP10.97□□□□□ -0.65
LINC00339-201ENST00000404210 SAMD8Q96LT4 415 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 VKORC1Q9BQB6 163 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 TSSK6Q9BXA6 273 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 ENKD1Q9H0I2 346 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 VCXQ9H320 206 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 VCX3BQ9H321 246 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 TXNIPQ9H3M7 391 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 EGLN3Q9H6Z9 239 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 NRIP3Q9NQ35 241 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 KLHL13Q9P2N7 655 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 ING1Q9UK53 422 aaPredicted RBP10.97□□□□□ -0.65
LINC00339-201ENST00000404210 BAIAP2Q9UQB8 552 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 OSGIN2Q9Y236 505 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 MED12LQ86YW9 2145 aa10.97□□□□□ -0.65
LINC00339-201ENST00000404210 KMT2BQ9UMN6 2715 aaPredicted RBP10.96□□□□□ -0.65
LINC00339-201ENST00000404210 TRGV8A0A0C4DH27 118 aa10.96□□□□□ -0.65
LINC00339-201ENST00000404210 H3BN98 237 aa10.96□□□□□ -0.65
LINC00339-201ENST00000404210 ARPC3O15145 178 aa10.96□□□□□ -0.65
LINC00339-201ENST00000404210 IDH3BO43837 385 aa10.96□□□□□ -0.65
LINC00339-201ENST00000404210 IL2RAP01589 272 aa10.96□□□□□ -0.65
LINC00339-201ENST00000404210 IGHMP01871 453 aa10.96□□□□□ -0.65
LINC00339-201ENST00000404210 F13BP05160 661 aa10.96□□□□□ -0.65
LINC00339-201ENST00000404210 IGFBP1P08833 259 aaPredicted RBP10.96□□□□□ -0.65
LINC00339-201ENST00000404210 GLI4P10075 376 aa10.96□□□□□ -0.65
LINC00339-201ENST00000404210 HLA-DOBP13765 273 aa10.96□□□□□ -0.65
LINC00339-201ENST00000404210 APEHP13798 732 aaKnown RBP10.96□□□□□ -0.65
LINC00339-201ENST00000404210 RPL4P36578 427 aaKnown RBP10.96□□□□□ -0.65
LINC00339-201ENST00000404210 RPS6KA3P51812 740 aa10.96□□□□□ -0.65
LINC00339-201ENST00000404210 CDK5Q00535 292 aa10.96□□□□□ -0.65
LINC00339-201ENST00000404210 MRPL49Q13405 166 aaKnown RBP10.96□□□□□ -0.65
LINC00339-201ENST00000404210 C1DQ13901 141 aaKnown RBP10.96□□□□□ -0.65
LINC00339-201ENST00000404210 IGFBP7Q16270 282 aa10.96□□□□□ -0.65
LINC00339-201ENST00000404210 EIF2S3LQ2VIR3 472 aaKnown RBP10.96□□□□□ -0.65
LINC00339-201ENST00000404210 SLC36A3Q495N2 470 aa10.96□□□□□ -0.65
LINC00339-201ENST00000404210 RIPPLY2Q5TAB7 128 aa10.96□□□□□ -0.65
LINC00339-201ENST00000404210 PLXDC2Q6UX71 529 aa10.96□□□□□ -0.65
LINC00339-201ENST00000404210 THSD4Q6ZMP0 1018 aa10.96□□□□□ -0.65
LINC00339-201ENST00000404210 SLC35D2Q76EJ3 337 aa10.96□□□□□ -0.65
LINC00339-201ENST00000404210 GALNT5Q7Z7M9 940 aa10.96□□□□□ -0.65
LINC00339-201ENST00000404210 TUSC5Q8IXB3 177 aa10.96□□□□□ -0.65
LINC00339-201ENST00000404210 ZIC4Q8N9L1 334 aa10.96□□□□□ -0.65
LINC00339-201ENST00000404210 C9orf106Q8NAJ2 232 aa10.96□□□□□ -0.65
LINC00339-201ENST00000404210 OR52L1Q8NGH7 329 aa10.96□□□□□ -0.65
LINC00339-201ENST00000404210 TEX47Q8TBZ9 253 aa10.96□□□□□ -0.65
LINC00339-201ENST00000404210 FANK1Q8TC84 345 aa10.96□□□□□ -0.65
LINC00339-201ENST00000404210 ABHD3Q8WU67 409 aa10.96□□□□□ -0.65
LINC00339-201ENST00000404210 TMEM45BQ96B21 275 aa10.96□□□□□ -0.65
LINC00339-201ENST00000404210 GABARAPL3Q9BY60 117 aa10.96□□□□□ -0.65
LINC00339-201ENST00000404210 PLA2G12AQ9BZM1 189 aa10.96□□□□□ -0.65
LINC00339-201ENST00000404210 PARPBPQ9NWS1 579 aa10.96□□□□□ -0.65
LINC00339-201ENST00000404210 EMC3Q9P0I2 261 aa10.96□□□□□ -0.65
LINC00339-201ENST00000404210 TINAGQ9UJW2 476 aa10.96□□□□□ -0.65
LINC00339-201ENST00000404210 ZNF346Q9UL40 294 aaKnown RBP10.96□□□□□ -0.65
LINC00339-201ENST00000404210 MEMO1Q9Y316 297 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms