RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 OR14A16Q8NHC5 309 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 NUBPLQ8TB37 319 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 ACOT12Q8WYK0 555 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 NKD1Q969G9 470 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 RFT1Q96AA3 541 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 ZNF501Q96CX3 271 aaPredicted RBP4.9□□□□□ -1.62
VPS41-203ENST00000395969 MRPS24Q96EL2 167 aaKnown RBP4.9□□□□□ -1.62
VPS41-203ENST00000395969 LCORQ96JN0 433 aaPredicted RBP4.9□□□□□ -1.62
VPS41-203ENST00000395969 GPR174Q9BXC1 333 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 RNF32Q9H0A6 362 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 DPAGT1Q9H3H5 408 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 XKR8Q9H6D3 395 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 KRCC1Q9NPI7 259 aaPredicted RBP4.9□□□□□ -1.62
VPS41-203ENST00000395969 COPZ2Q9P299 210 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 NDRG3Q9UGV2 375 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 MLXQ9UH92 298 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 MRPS33Q9Y291 106 aaKnown RBP4.9□□□□□ -1.62
VPS41-203ENST00000395969 SPIN1Q9Y657 262 aaPredicted RBP4.9□□□□□ -1.62
VPS41-203ENST00000395969 TNRC18O15417 2968 aaPredicted RBP4.9□□□□□ -1.62
VPS41-203ENST00000395969 LAMA3Q16787 3333 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 PDCD5O14737 125 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 CASKO14936 926 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 BCAT2O15382 392 aaPredicted RBP4.9□□□□□ -1.63
VPS41-203ENST00000395969 LRRTM2O43300 516 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 NTN1O95631 604 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 THY1P04216 161 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 PEPDP12955 493 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 CXCL2P19875 107 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 C4BPBP20851 252 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 SLC2A5P22732 501 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 RBMS1P29558 406 aaKnown RBP4.9□□□□□ -1.63
VPS41-203ENST00000395969 CD96P40200 585 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 ACAA2P42765 397 aaKnown RBP4.9□□□□□ -1.63
VPS41-203ENST00000395969 OR1E2P47887 323 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 SELENOPP49908 381 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 XKP51811 444 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 FGL1Q08830 312 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 C17orf67Q0P5P2 114 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 IL11RAQ14626 422 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 PDSS1Q5T2R2 415 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 LCE2DQ5TA82 110 aaPredicted RBP4.9□□□□□ -1.63
VPS41-203ENST00000395969 TMEM88Q6PEY1 159 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 POMZP3Q6PJE2 187 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 FAM198BQ6UWH4 519 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 LSRQ86X29 649 aaPredicted RBP4.9□□□□□ -1.63
VPS41-203ENST00000395969 SLC25A45Q8N413 288 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 OR4D10Q8NGI6 311 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 OR5M3Q8NGP4 307 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 SCARB1Q8WTV0 552 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 HMGB4Q8WW32 186 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 OSTF1Q92882 214 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 NAT6Q93015 286 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 MAL2Q969L2 176 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 C1GALT1C1Q96EU7 318 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 TMPRSS13Q9BYE2 586 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 ADAM19Q9H013 955 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 TCEAL2Q9H3H9 227 aaPredicted RBP4.9□□□□□ -1.63
VPS41-203ENST00000395969 HRASLS2Q9NWW9 162 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 TINAGQ9UJW2 476 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 MKL2Q9ULH7 1088 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 ATXN7L1Q9ULK2 861 aaPredicted RBP4.9□□□□□ -1.63
VPS41-203ENST00000395969 CBLCQ9ULV8 474 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 CYP8B1Q9UNU6 501 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 DTX4Q9Y2E6 619 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 SLC6A5Q9Y345 797 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 TRAPPC13A5PLN9 417 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 FAM74A7A6NL05 159 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 B4E171 279 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 TGFBR3LH3BV60 316 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 PRKYO43930 277 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 FGF17O60258 216 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 APOL3O95236 402 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 S100A6P06703 90 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 ADRB1P08588 477 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 ST6GAL1P15907 406 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 IGFBP4P22692 258 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 RAB40BQ12829 278 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 KRT33BQ14525 404 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 RBMS2Q15434 407 aaKnown RBP4.9□□□□□ -1.63
VPS41-203ENST00000395969 ELAVL1Q15717 326 aaKnown RBP4.9□□□□□ -1.63
VPS41-203ENST00000395969 HFEQ30201 348 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 FAM74A3Q4VXF1 159 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 EMC4Q5J8M3 183 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 DCST2Q5T1A1 773 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 AADACL4Q5VUY2 407 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 ZNF836Q6ZNA1 936 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 ZNF550Q7Z398 422 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 LRRC28Q86X40 367 aaPredicted RBP4.9□□□□□ -1.63
VPS41-203ENST00000395969 NAXDQ8IW45 347 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 NFAM1Q8NET5 270 aaPredicted RBP4.9□□□□□ -1.63
VPS41-203ENST00000395969 Q8NFD4 153 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 OR2T35Q8NGX2 323 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 OR1S1Q8NH92 325 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 ZNF721Q8TF20 911 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 RHOVQ96L33 236 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 BBS4Q96RK4 519 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 ELF4Q99607 663 aaPredicted RBP4.9□□□□□ -1.63
VPS41-203ENST00000395969 ARHGAP9Q9BRR9 750 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 SPRY4Q9C004 299 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 HDHD2Q9H0R4 259 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms