RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 SOHLH2Q9NX45 425 aa12.29□□□□□ -0.44
GTF2F1-201ENST00000394456 NPFFR2Q9Y5X5 522 aa12.29□□□□□ -0.44
GTF2F1-201ENST00000394456 TRAV1-2A0A0B4J238 106 aa12.28□□□□□ -0.44
GTF2F1-201ENST00000394456 CDC14CA4D256 554 aa12.28□□□□□ -0.44
GTF2F1-201ENST00000394456 SERINC4A6NH21 518 aa12.28□□□□□ -0.44
GTF2F1-201ENST00000394456 DHFRP00374 187 aa12.28□□□□□ -0.44
GTF2F1-201ENST00000394456 FASLGP48023 281 aa12.28□□□□□ -0.44
GTF2F1-201ENST00000394456 MMP15P51511 669 aa12.28□□□□□ -0.44
GTF2F1-201ENST00000394456 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.28□□□□□ -0.44
GTF2F1-201ENST00000394456 GKN2Q86XP6 184 aa12.28□□□□□ -0.44
GTF2F1-201ENST00000394456 OR51A4Q8NGJ6 313 aa12.28□□□□□ -0.44
GTF2F1-201ENST00000394456 NRSN2Q9GZP1 204 aa12.28□□□□□ -0.44
GTF2F1-201ENST00000394456 OR10A4Q9H209 315 aa12.28□□□□□ -0.44
GTF2F1-201ENST00000394456 NRIP3Q9NQ35 241 aa12.28□□□□□ -0.44
GTF2F1-201ENST00000394456 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.28□□□□□ -0.44
GTF2F1-201ENST00000394456 SOX1O00570 391 aaPredicted RBP12.28□□□□□ -0.44
GTF2F1-201ENST00000394456 RAD1O60671 282 aa12.28□□□□□ -0.44
GTF2F1-201ENST00000394456 H2AFB2P0C5Z0 115 aa12.28□□□□□ -0.44
GTF2F1-201ENST00000394456 ADRA2CP18825 462 aa12.28□□□□□ -0.44
GTF2F1-201ENST00000394456 CD53P19397 219 aa12.28□□□□□ -0.44
GTF2F1-201ENST00000394456 RBM34P42696 430 aaKnown RBP12.28□□□□□ -0.44
GTF2F1-201ENST00000394456 SNTB2Q13425 540 aaKnown RBP12.28□□□□□ -0.44
GTF2F1-201ENST00000394456 ZNF141Q15928 474 aa12.28□□□□□ -0.44
GTF2F1-201ENST00000394456 C1QL3Q5VWW1 255 aa12.28□□□□□ -0.44
GTF2F1-201ENST00000394456 TMEM151BQ8IW70 566 aa12.28□□□□□ -0.44
GTF2F1-201ENST00000394456 SLC2A12Q8TD20 617 aa12.28□□□□□ -0.44
GTF2F1-201ENST00000394456 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.28□□□□□ -0.44
GTF2F1-201ENST00000394456 ATOH1Q92858 354 aaPredicted RBP12.28□□□□□ -0.44
GTF2F1-201ENST00000394456 ALG12Q9BV10 488 aa12.28□□□□□ -0.44
GTF2F1-201ENST00000394456 CHIAQ9BZP6 476 aa12.28□□□□□ -0.44
GTF2F1-201ENST00000394456 OR10A5Q9H207 317 aa12.28□□□□□ -0.44
GTF2F1-201ENST00000394456 LIN7BQ9HAP6 207 aa12.28□□□□□ -0.44
GTF2F1-201ENST00000394456 PRTFDC1Q9NRG1 225 aa12.28□□□□□ -0.44
GTF2F1-201ENST00000394456 IGHV5-51A0A0C4DH38 117 aa12.27□□□□□ -0.44
GTF2F1-201ENST00000394456 GPR171O14626 319 aa12.27□□□□□ -0.44
GTF2F1-201ENST00000394456 OR7A10O76100 309 aa12.27□□□□□ -0.44
GTF2F1-201ENST00000394456 CLPSP04118 112 aa12.27□□□□□ -0.44
GTF2F1-201ENST00000394456 OR3A3P47888 321 aa12.27□□□□□ -0.44
GTF2F1-201ENST00000394456 VEGFCP49767 419 aa12.27□□□□□ -0.44
GTF2F1-201ENST00000394456 TRAM1Q15629 374 aa12.27□□□□□ -0.44
GTF2F1-201ENST00000394456 PRTGQ2VWP7 1150 aa12.27□□□□□ -0.44
GTF2F1-201ENST00000394456 FAM209AQ5JX71 171 aa12.27□□□□□ -0.44
GTF2F1-201ENST00000394456 BICRALQ6AI39 1079 aa12.27□□□□□ -0.44
GTF2F1-201ENST00000394456 LRRC69Q6ZNQ3 347 aa12.27□□□□□ -0.44
GTF2F1-201ENST00000394456 TEX19Q8NA77 164 aa12.27□□□□□ -0.44
GTF2F1-201ENST00000394456 OR11G2Q8NGC1 345 aa12.27□□□□□ -0.44
GTF2F1-201ENST00000394456 HLA-CQ95604 372 aa12.27□□□□□ -0.44
GTF2F1-201ENST00000394456 MMABQ96EY8 250 aaPredicted RBP12.27□□□□□ -0.44
GTF2F1-201ENST00000394456 HYLS1Q96M11 299 aa12.27□□□□□ -0.44
GTF2F1-201ENST00000394456 AMELYQ99218 206 aa12.27□□□□□ -0.44
GTF2F1-201ENST00000394456 SEC22CQ9BRL7 303 aa12.27□□□□□ -0.44
GTF2F1-201ENST00000394456 NMNAT2Q9BZQ4 307 aa12.27□□□□□ -0.44
GTF2F1-201ENST00000394456 HEXA-AS1Q9H8Q6 139 aa12.27□□□□□ -0.44
GTF2F1-201ENST00000394456 PRDM9Q9NQV7 894 aa12.27□□□□□ -0.44
GTF2F1-201ENST00000394456 SPATA2Q9UM82 520 aa12.27□□□□□ -0.44
GTF2F1-201ENST00000394456 BAIAP2Q9UQB8 552 aa12.27□□□□□ -0.44
GTF2F1-201ENST00000394456 G3V3Q6 166 aa12.27□□□□□ -0.45
GTF2F1-201ENST00000394456 BCKDHBP21953 392 aa12.27□□□□□ -0.45
GTF2F1-201ENST00000394456 DPP4P27487 766 aa12.27□□□□□ -0.45
GTF2F1-201ENST00000394456 P2RX3P56373 397 aa12.27□□□□□ -0.45
GTF2F1-201ENST00000394456 EGR4Q05215 589 aa12.27□□□□□ -0.45
GTF2F1-201ENST00000394456 RPL22L1Q6P5R6 122 aaKnown RBP12.27□□□□□ -0.45
GTF2F1-201ENST00000394456 MED25Q71SY5 747 aa12.27□□□□□ -0.45
GTF2F1-201ENST00000394456 LSM14AQ8ND56 463 aaKnown RBP12.27□□□□□ -0.45
GTF2F1-201ENST00000394456 PPP1R14AQ96A00 147 aa12.27□□□□□ -0.45
GTF2F1-201ENST00000394456 KTI12Q96EK9 354 aaPredicted RBP12.27□□□□□ -0.45
GTF2F1-201ENST00000394456 DGAT2Q96PD7 388 aa12.27□□□□□ -0.45
GTF2F1-201ENST00000394456 ZCCHC4Q9H5U6 513 aa12.27□□□□□ -0.45
GTF2F1-201ENST00000394456 WDR76Q9H967 626 aa12.27□□□□□ -0.45
GTF2F1-201ENST00000394456 Q9N2J8 555 aa12.27□□□□□ -0.45
GTF2F1-201ENST00000394456 MRM2Q9UI43 246 aaKnown RBP12.27□□□□□ -0.45
GTF2F1-201ENST00000394456 MRPS17Q9Y2R5 130 aaKnown RBP12.27□□□□□ -0.45
GTF2F1-201ENST00000394456 NUBP2Q9Y5Y2 271 aa12.27□□□□□ -0.45
GTF2F1-201ENST00000394456 TNFRSF10AO00220 468 aa12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 POU4F2Q12837 409 aa12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 GGTLC2Q14390 218 aa12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 POU4F3Q15319 338 aa12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 LGALSLQ3ZCW2 172 aaPredicted RBP12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 DPY19L2P2Q6ZN68 376 aa12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 CREB3L2Q70SY1 520 aa12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 SYS1Q8N2H4 156 aa12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 PIAS4Q8N2W9 510 aaPredicted RBP12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 PHOSPHO1Q8TCT1 267 aa12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 MAP6Q96JE9 813 aa12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 DPCDQ9BVM2 203 aaPredicted RBP12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 SPRTNQ9H040 489 aaPredicted RBP12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 C20orf85Q9H1P6 137 aa12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 CAMK2AQ9UQM7 478 aa12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 TRAV8-7A0A075B6U6 113 aa12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 IFITM5A6NNB3 132 aa12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 ZNF879B4DU55 563 aa12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 SSNA1O43805 119 aa12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 DOK2O60496 412 aa12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 ARL6IP5O75915 188 aa12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 MPC2O95563 127 aa12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 CFDP00746 253 aaPredicted RBP12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 MYF5P13349 255 aa12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 RNH1P13489 461 aaKnown RBP12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 DCTDP32321 178 aa12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 RAD52P43351 418 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms