RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 IKZF2Q9UKS7 526 aa12.73□□□□□ -0.37
GAPVD1-205ENST00000394084 FOXJ3Q9UPW0 622 aa12.73□□□□□ -0.37
GAPVD1-205ENST00000394084 OIP5O43482 229 aa12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 ITGA10O75578 1167 aa12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 IFNA7P01567 189 aa12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 MAS1P04201 325 aa12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 CT45A8P0DMV1 189 aa12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 CT45A9P0DMV2 189 aa12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 GRK1Q15835 563 aa12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 CT45A2Q5DJT8 189 aa12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 TCTE1Q5JU00 501 aa12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 CHMP1BQ7LBR1 199 aa12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 KANSL1Q7Z3B3 1105 aa12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 SLC35F3Q8IY50 421 aa12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 C16orf52Q8NHV5 167 aa12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 RELTQ969Z4 430 aa12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 ELSPBP1Q96BH3 223 aa12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 NMNAT2Q9BZQ4 307 aa12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 TAS2R10Q9NYW0 307 aa12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 UBQLN2Q9UHD9 624 aa12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 EML5Q05BV3 1969 aa12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 IGKV1D-42A0A075B6H8 117 aa12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 RPS10-NUDT3A0A1W2PQS6 291 aa12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 ELOA3DA6NLF2 546 aaPredicted RBP12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 NPIPB9F8W1W9 429 aa12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 M0R233 179 aa12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 IFNA16P05015 189 aa12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 PBX2P40425 430 aa12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 P2RX1P51575 399 aa12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 AP2S1P53680 142 aaPredicted RBP12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 ELOA3BQ3SY89 546 aa12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 LIPNQ5VXI9 398 aa12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 STAC2Q6ZMT1 411 aa12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 TAF8Q7Z7C8 310 aa12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 TMPRSS12Q86WS5 348 aa12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 LSM14AQ8ND56 463 aaKnown RBP12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 ELOA3Q8NG57 546 aa12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 HOXB13Q92826 284 aaPredicted RBP12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 RNF166Q96A37 237 aaPredicted RBP12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 MRPL48Q96GC5 212 aaKnown RBP12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 MSANTD3Q96H12 275 aa12.72□□□□□ -0.37
GAPVD1-205ENST00000394084 DCTN6O00399 190 aa12.71□□□□□ -0.37
GAPVD1-205ENST00000394084 PPM1BO75688 479 aa12.71□□□□□ -0.37
GAPVD1-205ENST00000394084 GPANK1O95872 356 aa12.71□□□□□ -0.37
GAPVD1-205ENST00000394084 ADRA2CP18825 462 aa12.71□□□□□ -0.37
GAPVD1-205ENST00000394084 GRK6P43250 576 aa12.71□□□□□ -0.37
GAPVD1-205ENST00000394084 PPM1FP49593 454 aaPredicted RBP12.71□□□□□ -0.37
GAPVD1-205ENST00000394084 CTXN1P60606 82 aa12.71□□□□□ -0.37
GAPVD1-205ENST00000394084 FAM220AQ7Z4H9 259 aa12.71□□□□□ -0.37
GAPVD1-205ENST00000394084 SLC43A2Q8N370 569 aa12.71□□□□□ -0.37
GAPVD1-205ENST00000394084 LRFN5Q96NI6 719 aa12.71□□□□□ -0.37
GAPVD1-205ENST00000394084 DGAT2Q96PD7 388 aa12.71□□□□□ -0.37
GAPVD1-205ENST00000394084 MFRPQ9BY79 579 aa12.71□□□□□ -0.37
GAPVD1-205ENST00000394084 AKAP7Q9P0M2 348 aaPredicted RBP12.71□□□□□ -0.37
GAPVD1-205ENST00000394084 ING1Q9UK53 422 aaPredicted RBP12.71□□□□□ -0.37
GAPVD1-205ENST00000394084 VCANP13611 3396 aa12.71□□□□□ -0.37
GAPVD1-205ENST00000394084 ARPC3O15145 178 aa12.71□□□□□ -0.37
GAPVD1-205ENST00000394084 FOXS1O43638 330 aa12.71□□□□□ -0.37
GAPVD1-205ENST00000394084 ECDO95905 644 aaPredicted RBP12.71□□□□□ -0.37
GAPVD1-205ENST00000394084 KCNAB1Q14722 419 aa12.71□□□□□ -0.37
GAPVD1-205ENST00000394084 SLC35D3Q5M8T2 416 aa12.71□□□□□ -0.37
GAPVD1-205ENST00000394084 ARMC6Q6NXE6 501 aa12.71□□□□□ -0.37
GAPVD1-205ENST00000394084 MEIOBQ8N635 442 aa12.71□□□□□ -0.37
GAPVD1-205ENST00000394084 OR10AC1Q8NH08 325 aa12.71□□□□□ -0.37
GAPVD1-205ENST00000394084 OR5AK2Q8NH90 309 aa12.71□□□□□ -0.37
GAPVD1-205ENST00000394084 DHRS9Q9BPW9 319 aa12.71□□□□□ -0.37
GAPVD1-205ENST00000394084 PBX4Q9BYU1 374 aa12.71□□□□□ -0.37
GAPVD1-205ENST00000394084 ULBP3Q9BZM4 244 aa12.71□□□□□ -0.37
GAPVD1-205ENST00000394084 TWSG1Q9GZX9 223 aa12.71□□□□□ -0.37
GAPVD1-205ENST00000394084 PLEKHA1Q9HB21 404 aa12.71□□□□□ -0.37
GAPVD1-205ENST00000394084 PRTFDC1Q9NRG1 225 aa12.71□□□□□ -0.37
GAPVD1-205ENST00000394084 ZNF224Q9NZL3 707 aa12.71□□□□□ -0.37
GAPVD1-205ENST00000394084 MRM2Q9UI43 246 aaKnown RBP12.71□□□□□ -0.37
GAPVD1-205ENST00000394084 PCDHGA5Q9Y5G8 931 aa12.71□□□□□ -0.37
GAPVD1-205ENST00000394084 EFCAB7A8K855 629 aa12.71□□□□□ -0.38
GAPVD1-205ENST00000394084 TNFRSF10CO14798 259 aa12.71□□□□□ -0.38
GAPVD1-205ENST00000394084 SHOXO15266 292 aa12.71□□□□□ -0.38
GAPVD1-205ENST00000394084 TPMTP51580 245 aa12.71□□□□□ -0.38
GAPVD1-205ENST00000394084 C9orf50Q5SZB4 431 aa12.71□□□□□ -0.38
GAPVD1-205ENST00000394084 METTL11BQ5VVY1 283 aa12.71□□□□□ -0.38
GAPVD1-205ENST00000394084 SLC22A18ASQ8N1D0 253 aa12.71□□□□□ -0.38
GAPVD1-205ENST00000394084 OR52B4Q8NGK2 314 aa12.71□□□□□ -0.38
GAPVD1-205ENST00000394084 ELF4Q99607 663 aaPredicted RBP12.71□□□□□ -0.38
GAPVD1-205ENST00000394084 G6PC3Q9BUM1 346 aa12.71□□□□□ -0.38
GAPVD1-205ENST00000394084 NANSQ9NR45 359 aa12.71□□□□□ -0.38
GAPVD1-205ENST00000394084 FRRS1LQ9P0K9 344 aa12.71□□□□□ -0.38
GAPVD1-205ENST00000394084 YBX2Q9Y2T7 364 aaKnown RBP12.71□□□□□ -0.38
GAPVD1-205ENST00000394084 NPTNQ9Y639 398 aa12.71□□□□□ -0.38
GAPVD1-205ENST00000394084 ARID1BQ8NFD5 2236 aaPredicted RBP12.7□□□□□ -0.38
GAPVD1-205ENST00000394084 H0YC42 278 aa12.7□□□□□ -0.38
GAPVD1-205ENST00000394084 TGM6O95932 706 aa12.7□□□□□ -0.38
GAPVD1-205ENST00000394084 TNFP01375 233 aa12.7□□□□□ -0.38
GAPVD1-205ENST00000394084 CD1AP06126 327 aa12.7□□□□□ -0.38
GAPVD1-205ENST00000394084 RNH1P13489 461 aaKnown RBP12.7□□□□□ -0.38
GAPVD1-205ENST00000394084 ART1P52961 327 aa12.7□□□□□ -0.38
GAPVD1-205ENST00000394084 TAS2R20P59543 309 aa12.7□□□□□ -0.38
GAPVD1-205ENST00000394084 AP3S2P59780 193 aa12.7□□□□□ -0.38
GAPVD1-205ENST00000394084 UBE2IP63279 158 aaKnown RBP12.7□□□□□ -0.38
GAPVD1-205ENST00000394084 CD226Q15762 336 aa12.7□□□□□ -0.38
GAPVD1-205ENST00000394084 WDR45BQ5MNZ6 344 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms