RNA–Protein interactions for RNA: ENST00000378406.5

CCDC107-202, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC107, Length 1,016 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-202ENST00000378406 NME4O00746 187 aa17.05■□□□□ 0.32
CCDC107-202ENST00000378406 EIF1BO60739 113 aaKnown RBP17.05■□□□□ 0.32
CCDC107-202ENST00000378406 ATP5HO75947 161 aa17.05■□□□□ 0.32
CCDC107-202ENST00000378406 WNT11O96014 354 aa17.05■□□□□ 0.32
CCDC107-202ENST00000378406 BCHEP06276 602 aa17.05■□□□□ 0.32
CCDC107-202ENST00000378406 TFPTP0C1Z6 253 aa17.05■□□□□ 0.32
CCDC107-202ENST00000378406 ARAFP10398 606 aa17.05■□□□□ 0.32
CCDC107-202ENST00000378406 ZNF23P17027 643 aa17.05■□□□□ 0.32
CCDC107-202ENST00000378406 GZMMP51124 257 aa17.05■□□□□ 0.32
CCDC107-202ENST00000378406 SNRPD2P62316 118 aaKnown RBP17.05■□□□□ 0.32
CCDC107-202ENST00000378406 SLC35A1P78382 337 aa17.05■□□□□ 0.32
CCDC107-202ENST00000378406 CDK6Q00534 326 aa17.05■□□□□ 0.32
CCDC107-202ENST00000378406 LIPEQ05469 1076 aa17.05■□□□□ 0.32
CCDC107-202ENST00000378406 GNA13Q14344 377 aa17.05■□□□□ 0.32
CCDC107-202ENST00000378406 CARTPTQ16568 116 aa17.05■□□□□ 0.32
CCDC107-202ENST00000378406 CR1LQ2VPA4 569 aa17.05■□□□□ 0.32
CCDC107-202ENST00000378406 FRRS1Q6ZNA5 592 aa17.05■□□□□ 0.32
CCDC107-202ENST00000378406 NET1Q7Z628 596 aaPredicted RBP17.05■□□□□ 0.32
CCDC107-202ENST00000378406 HMGN2P46Q86SG4 172 aa17.05■□□□□ 0.32
CCDC107-202ENST00000378406 CALHM3Q86XJ0 350 aa17.05■□□□□ 0.32
CCDC107-202ENST00000378406 NFKBIDQ8NI38 313 aa17.05■□□□□ 0.32
CCDC107-202ENST00000378406 TMEM19Q96HH6 336 aa17.05■□□□□ 0.32
CCDC107-202ENST00000378406 BOD1Q96IK1 185 aa17.05■□□□□ 0.32
CCDC107-202ENST00000378406 ZNF583Q96ND8 569 aa17.05■□□□□ 0.32
CCDC107-202ENST00000378406 BPESC1Q9GZL8 116 aa17.05■□□□□ 0.32
CCDC107-202ENST00000378406 TMEM38AQ9H6F2 299 aa17.05■□□□□ 0.32
CCDC107-202ENST00000378406 MYOZ1Q9NP98 299 aaPredicted RBP17.05■□□□□ 0.32
CCDC107-202ENST00000378406 TAS2R1Q9NYW7 299 aa17.05■□□□□ 0.32
CCDC107-202ENST00000378406 GMPR2Q9P2T1 348 aaKnown RBP17.05■□□□□ 0.32
CCDC107-202ENST00000378406 TMED7-TICAM2A0A0A6YYA0 188 aa17.04■□□□□ 0.32
CCDC107-202ENST00000378406 IGHV1-18A0A0C4DH31 117 aa17.04■□□□□ 0.32
CCDC107-202ENST00000378406 TMEM72A0PK05 275 aa17.04■□□□□ 0.32
CCDC107-202ENST00000378406 CHRM4P08173 479 aa17.04■□□□□ 0.32
CCDC107-202ENST00000378406 SERPINF1P36955 418 aa17.04■□□□□ 0.32
CCDC107-202ENST00000378406 IDH2P48735 452 aaKnown RBP17.04■□□□□ 0.32
CCDC107-202ENST00000378406 KCNJ10P78508 379 aa17.04■□□□□ 0.32
CCDC107-202ENST00000378406 SCARB2Q14108 478 aa17.04■□□□□ 0.32
CCDC107-202ENST00000378406 MAPK11Q15759 364 aa17.04■□□□□ 0.32
CCDC107-202ENST00000378406 ADRM1Q16186 407 aa17.04■□□□□ 0.32
CCDC107-202ENST00000378406 IQCCQ4KMZ1 466 aa17.04■□□□□ 0.32
CCDC107-202ENST00000378406 HIKESHIQ53FT3 197 aa17.04■□□□□ 0.32
CCDC107-202ENST00000378406 KLHL24Q6TFL4 600 aa17.04■□□□□ 0.32
CCDC107-202ENST00000378406 LRRC74BQ6ZQY2 392 aa17.04■□□□□ 0.32
CCDC107-202ENST00000378406 SLC46A3Q7Z3Q1 461 aa17.04■□□□□ 0.32
CCDC107-202ENST00000378406 PTOV1Q86YD1 416 aa17.04■□□□□ 0.32
CCDC107-202ENST00000378406 ZIC4Q8N9L1 334 aa17.04■□□□□ 0.32
CCDC107-202ENST00000378406 C11orf65Q8NCR3 313 aa17.04■□□□□ 0.32
CCDC107-202ENST00000378406 TMEM45BQ96B21 275 aa17.04■□□□□ 0.32
CCDC107-202ENST00000378406 VRK1Q99986 396 aaPredicted RBP17.04■□□□□ 0.32
CCDC107-202ENST00000378406 NAA11Q9BSU3 229 aaPredicted RBP17.04■□□□□ 0.32
CCDC107-202ENST00000378406 SPATA9Q9BWV2 254 aa17.04■□□□□ 0.32
CCDC107-202ENST00000378406 CALML5Q9NZT1 146 aa17.04■□□□□ 0.32
CCDC107-202ENST00000378406 ABCD2Q9UBJ2 740 aa17.04■□□□□ 0.32
CCDC107-202ENST00000378406 OSGIN1Q9UJX0 560 aa17.04■□□□□ 0.32
CCDC107-202ENST00000378406 USP22Q9UPT9 525 aa17.04■□□□□ 0.32
CCDC107-202ENST00000378406 TMED7Q9Y3B3 224 aa17.04■□□□□ 0.32
CCDC107-202ENST00000378406 FAM220BPB1ANY3 271 aa17.03■□□□□ 0.32
CCDC107-202ENST00000378406 AP3D1O14617 1153 aa17.03■□□□□ 0.32
CCDC107-202ENST00000378406 GYG2O15488 501 aa17.03■□□□□ 0.32
CCDC107-202ENST00000378406 ZNF208O43345 1280 aa17.03■□□□□ 0.32
CCDC107-202ENST00000378406 HNRNPCL1O60812 293 aaKnown RBP17.03■□□□□ 0.32
CCDC107-202ENST00000378406 CDH2P19022 906 aaPredicted RBP17.03■□□□□ 0.32
CCDC107-202ENST00000378406 HTR3AP46098 478 aa17.03■□□□□ 0.32
CCDC107-202ENST00000378406 GSK3BP49841 420 aa17.03■□□□□ 0.32
CCDC107-202ENST00000378406 CRISP3P54108 245 aa17.03■□□□□ 0.32
CCDC107-202ENST00000378406 RBBP4Q09028 425 aa17.03■□□□□ 0.32
CCDC107-202ENST00000378406 RPS26P11Q5JNZ5 115 aaPredicted RBP17.03■□□□□ 0.32
CCDC107-202ENST00000378406 PAQR6Q6TCH4 344 aa17.03■□□□□ 0.32
CCDC107-202ENST00000378406 RNF148Q8N7C7 305 aa17.03■□□□□ 0.32
CCDC107-202ENST00000378406 OR2T12Q8NG77 320 aa17.03■□□□□ 0.32
CCDC107-202ENST00000378406 CNOT9Q92600 299 aaKnown RBP17.03■□□□□ 0.32
CCDC107-202ENST00000378406 PMM1Q92871 262 aa17.03■□□□□ 0.32
CCDC107-202ENST00000378406 SLC7A6OSQ96CW6 309 aaPredicted RBP17.03■□□□□ 0.32
CCDC107-202ENST00000378406 DDIT4LQ96D03 193 aa17.03■□□□□ 0.32
CCDC107-202ENST00000378406 C1orf159Q96HA4 380 aa17.03■□□□□ 0.32
CCDC107-202ENST00000378406 C1orf21Q9H246 121 aa17.03■□□□□ 0.32
CCDC107-202ENST00000378406 CA10Q9NS85 328 aa17.03■□□□□ 0.32
CCDC107-202ENST00000378406 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.03■□□□□ 0.32
CCDC107-202ENST00000378406 ZC3H12DA2A288 527 aaKnown RBP17.02■□□□□ 0.32
CCDC107-202ENST00000378406 B9A039 149 aa17.02■□□□□ 0.32
CCDC107-202ENST00000378406 RASSF2P50749 326 aa17.02■□□□□ 0.32
CCDC107-202ENST00000378406 POLR2HP52434 150 aaKnown RBP17.02■□□□□ 0.32
CCDC107-202ENST00000378406 VMACQ2NL98 169 aa17.02■□□□□ 0.32
CCDC107-202ENST00000378406 REEP3Q6NUK4 255 aa17.02■□□□□ 0.32
CCDC107-202ENST00000378406 ERICH5Q6P6B1 374 aa17.02■□□□□ 0.32
CCDC107-202ENST00000378406 RFLNBQ8N5W9 214 aa17.02■□□□□ 0.32
CCDC107-202ENST00000378406 POMGNT2Q8NAT1 580 aa17.02■□□□□ 0.32
CCDC107-202ENST00000378406 ZNF540Q8NDQ6 660 aa17.02■□□□□ 0.32
CCDC107-202ENST00000378406 ZNF385AQ96PM9 386 aaKnown RBP17.02■□□□□ 0.32
CCDC107-202ENST00000378406 SLC38A2Q96QD8 506 aa17.02■□□□□ 0.32
CCDC107-202ENST00000378406 KCTD14Q9BQ13 255 aaPredicted RBP17.02■□□□□ 0.32
CCDC107-202ENST00000378406 BTBD10Q9BSF8 475 aa17.02■□□□□ 0.32
CCDC107-202ENST00000378406 SLC38A1Q9H2H9 487 aa17.02■□□□□ 0.32
CCDC107-202ENST00000378406 MTHFD2LQ9H903 347 aaPredicted RBP17.02■□□□□ 0.32
CCDC107-202ENST00000378406 OBP2BQ9NPH6 170 aa17.02■□□□□ 0.32
CCDC107-202ENST00000378406 ANGPT4Q9Y264 503 aa17.02■□□□□ 0.32
CCDC107-202ENST00000378406 A0A0G2JPF8 293 aa17.01■□□□□ 0.31
CCDC107-202ENST00000378406 LRP5LA4QPB2 252 aa17.01■□□□□ 0.31
CCDC107-202ENST00000378406 HNRNPCL2B2RXH8 293 aa17.01■□□□□ 0.31
CCDC107-202ENST00000378406 HNRNPCL3B7ZW38 293 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms