RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 NCDNQ9UBB6 729 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 OPN4Q9UHM6 478 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 DLEC1Q9Y238 1755 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 A0A1W2PPK0 400 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 OR13C7P0DN81 318 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 KIR3DL2P43630 455 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 RFX3P48380 749 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 AGFG1P52594 562 aaKnown RBP10.91□□□□□ -0.66
NPHP4-202ENST00000378161 DVL1P1P54792 670 aaPredicted RBP10.91□□□□□ -0.66
NPHP4-202ENST00000378161 UBE2V2Q15819 145 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 YAF2Q8IY57 180 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 CLDN19Q8N6F1 224 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 OR4K17Q8NGC6 315 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 OR52E4Q8NGH9 312 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 CHTF18Q8WVB6 975 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 MR1Q95460 341 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 ZBTB8AQ96BR9 441 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 LUZP4Q9P127 313 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 DNAJC25-GNG10A0A024R161 153 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 STAG3L3P0CL85 134 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 SNRPBP14678 240 aaKnown RBP10.91□□□□□ -0.66
NPHP4-202ENST00000378161 RCC1P18754 421 aaPredicted RBP10.91□□□□□ -0.66
NPHP4-202ENST00000378161 GALP22466 123 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 UQCRC2P22695 453 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 CSNK1DP48730 415 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 SULT1A1P50225 295 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 CCR8P51685 355 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 SUOXP51687 545 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 UBE2MP61081 183 aaKnown RBP10.91□□□□□ -0.66
NPHP4-202ENST00000378161 FABP5Q01469 135 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 UPP1Q16831 310 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 NKAIN1Q4KMZ8 207 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 PAQR6Q6TCH4 344 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 ORAI1Q96D31 301 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 ZNF514Q96K75 400 aaPredicted RBP10.91□□□□□ -0.66
NPHP4-202ENST00000378161 ZNF582Q96NG8 517 aaPredicted RBP10.91□□□□□ -0.66
NPHP4-202ENST00000378161 TGM7Q96PF1 710 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 GPR87Q9BY21 358 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 SLC26A1Q9H2B4 701 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 LYRM2Q9NU23 88 aaPredicted RBP10.91□□□□□ -0.66
NPHP4-202ENST00000378161 GLI3P10071 1580 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 MYO10Q9HD67 2058 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 C9orf170A2RU37 121 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 AQP7P3A6NL99 342 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 J3QLW9 94 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 PTGESO14684 152 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 ATP1B1P05026 303 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 CSF1P09603 554 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 HSD3B1P14060 373 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 ZNF19P17023 458 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 SDHBP21912 280 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 NDUFS1P28331 727 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 RASGEF1BQ0VAM2 473 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 MOB3CQ70IA8 216 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 GCNT2Q8N0V5 402 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 OR5L1Q8NGL2 311 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 TMEM27Q9HBJ8 222 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 ZDHHC3Q9NYG2 299 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 C14orf166Q9Y224 244 aaKnown RBP10.91□□□□□ -0.66
NPHP4-202ENST00000378161 FBXO7Q9Y3I1 522 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 CHST2Q9Y4C5 530 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 CLEC3BP05452 202 aa10.9□□□□□ -0.66
NPHP4-202ENST00000378161 RNH1P13489 461 aaKnown RBP10.9□□□□□ -0.66
NPHP4-202ENST00000378161 FLT3LGP49771 235 aa10.9□□□□□ -0.66
NPHP4-202ENST00000378161 POLR2HP52434 150 aaKnown RBP10.9□□□□□ -0.66
NPHP4-202ENST00000378161 MELKQ14680 651 aa10.9□□□□□ -0.66
NPHP4-202ENST00000378161 CLEC12AQ5QGZ9 265 aa10.9□□□□□ -0.66
NPHP4-202ENST00000378161 EID2Q8N6I1 236 aa10.9□□□□□ -0.66
NPHP4-202ENST00000378161 CPPED1Q9BRF8 314 aaPredicted RBP10.9□□□□□ -0.66
NPHP4-202ENST00000378161 ALKBH7Q9BT30 221 aaPredicted RBP10.9□□□□□ -0.66
NPHP4-202ENST00000378161 ASB6Q9NWX5 421 aa10.9□□□□□ -0.66
NPHP4-202ENST00000378161 PCTPQ9UKL6 214 aa10.9□□□□□ -0.66
NPHP4-202ENST00000378161 MEIS3P2A8K0S8 358 aa10.9□□□□□ -0.66
NPHP4-202ENST00000378161 CITO14578 2027 aa10.9□□□□□ -0.66
NPHP4-202ENST00000378161 TOX3O15405 576 aaPredicted RBP10.9□□□□□ -0.66
NPHP4-202ENST00000378161 NPSP0C0P6 89 aa10.9□□□□□ -0.66
NPHP4-202ENST00000378161 HOXA9P31269 272 aa10.9□□□□□ -0.66
NPHP4-202ENST00000378161 GPR1P46091 355 aa10.9□□□□□ -0.66
NPHP4-202ENST00000378161 RPL23AP62750 156 aaKnown RBP10.9□□□□□ -0.66
NPHP4-202ENST00000378161 RING1Q06587 406 aa10.9□□□□□ -0.66
NPHP4-202ENST00000378161 TPBGQ13641 420 aa10.9□□□□□ -0.66
NPHP4-202ENST00000378161 OR7A5Q15622 319 aa10.9□□□□□ -0.66
NPHP4-202ENST00000378161 KIAA0319Q5VV43 1072 aa10.9□□□□□ -0.66
NPHP4-202ENST00000378161 KLHL24Q6TFL4 600 aa10.9□□□□□ -0.66
NPHP4-202ENST00000378161 C6orf120Q7Z4R8 191 aa10.9□□□□□ -0.66
NPHP4-202ENST00000378161 MCEMP1Q8IX19 187 aa10.9□□□□□ -0.66
NPHP4-202ENST00000378161 OR10AD1Q8NGE0 317 aa10.9□□□□□ -0.66
NPHP4-202ENST00000378161 ZNF558Q96NG5 402 aa10.9□□□□□ -0.66
NPHP4-202ENST00000378161 SLC7A11Q9UPY5 501 aa10.9□□□□□ -0.66
NPHP4-202ENST00000378161 CPSF4LA6NMK7 179 aaKnown RBP10.9□□□□□ -0.67
NPHP4-202ENST00000378161 ANHXE9PGG2 379 aa10.9□□□□□ -0.67
NPHP4-202ENST00000378161 FGBP02675 491 aa10.9□□□□□ -0.67
NPHP4-202ENST00000378161 TNFRSF1BP20333 461 aa10.9□□□□□ -0.67
NPHP4-202ENST00000378161 SHC1P29353 583 aa10.9□□□□□ -0.67
NPHP4-202ENST00000378161 BUD31P41223 144 aaPredicted RBP10.9□□□□□ -0.67
NPHP4-202ENST00000378161 FHITP49789 147 aa10.9□□□□□ -0.67
NPHP4-202ENST00000378161 SPRYD7Q5W111 196 aa10.9□□□□□ -0.67
NPHP4-202ENST00000378161 NXPE4Q6UWF7 544 aa10.9□□□□□ -0.67
NPHP4-202ENST00000378161 ZNF100Q8IYN0 542 aa10.9□□□□□ -0.67
NPHP4-202ENST00000378161 RGL4Q8IZJ4 473 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms