RNA–Protein interactions for RNA: ENST00000371248.3

VPS37B-202, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-202ENST00000371248 NBASA2RRP1 2371 aa15.74■□□□□ 0.11
VPS37B-202ENST00000371248 KDM4EB2RXH2 506 aaPredicted RBP15.74■□□□□ 0.11
VPS37B-202ENST00000371248 C11orf98E9PRG8 122 aa15.74■□□□□ 0.11
VPS37B-202ENST00000371248 SOX14O95416 240 aa15.74■□□□□ 0.11
VPS37B-202ENST00000371248 IGFBP1P08833 259 aaPredicted RBP15.74■□□□□ 0.11
VPS37B-202ENST00000371248 FXYD6P3P58550 94 aa15.74■□□□□ 0.11
VPS37B-202ENST00000371248 RPS4XP62701 263 aaKnown RBP15.74■□□□□ 0.11
VPS37B-202ENST00000371248 RPL18Q07020 188 aaKnown RBP15.74■□□□□ 0.11
VPS37B-202ENST00000371248 DCTN2Q13561 401 aaKnown RBP15.74■□□□□ 0.11
VPS37B-202ENST00000371248 SOWAHCQ53LP3 525 aaPredicted RBP15.74■□□□□ 0.11
VPS37B-202ENST00000371248 ADGRE4PQ86SQ3 457 aa15.74■□□□□ 0.11
VPS37B-202ENST00000371248 GPAT4Q86UL3 456 aa15.74■□□□□ 0.11
VPS37B-202ENST00000371248 OR52D1Q9H346 318 aa15.74■□□□□ 0.11
VPS37B-202ENST00000371248 SLC22A20A6NK97 555 aa15.73■□□□□ 0.11
VPS37B-202ENST00000371248 FIGNL2A6NMB9 653 aa15.73■□□□□ 0.11
VPS37B-202ENST00000371248 RNF13O43567 381 aa15.73■□□□□ 0.11
VPS37B-202ENST00000371248 WDR1O75083 606 aa15.73■□□□□ 0.11
VPS37B-202ENST00000371248 TGM6O95932 706 aa15.73■□□□□ 0.11
VPS37B-202ENST00000371248 TP53P04637 393 aaPredicted RBP15.73■□□□□ 0.11
VPS37B-202ENST00000371248 TSPAN19P0C672 248 aa15.73■□□□□ 0.11
VPS37B-202ENST00000371248 GABRA1P14867 456 aa15.73■□□□□ 0.11
VPS37B-202ENST00000371248 UQCRC1P31930 480 aa15.73■□□□□ 0.11
VPS37B-202ENST00000371248 PRPS1P60891 318 aa15.73■□□□□ 0.11
VPS37B-202ENST00000371248 PUDPQ08623 228 aa15.73■□□□□ 0.11
VPS37B-202ENST00000371248 SF3B4Q15427 424 aaKnown RBP eCLIP15.73■□□□□ 0.111e-6■■■□□ 16.5
VPS37B-202ENST00000371248 ANKDD1AQ495B1 522 aa15.73■□□□□ 0.11
VPS37B-202ENST00000371248 ACSF3Q4G176 576 aaPredicted RBP15.73■□□□□ 0.11
VPS37B-202ENST00000371248 SMARCD3Q6STE5 483 aa15.73■□□□□ 0.11
VPS37B-202ENST00000371248 ZNF620Q6ZNG0 422 aa15.73■□□□□ 0.11
VPS37B-202ENST00000371248 DOLPP1Q86YN1 238 aa15.73■□□□□ 0.11
VPS37B-202ENST00000371248 ADPRHL1Q8NDY3 354 aa15.73■□□□□ 0.11
VPS37B-202ENST00000371248 FANK1Q8TC84 345 aa15.73■□□□□ 0.11
VPS37B-202ENST00000371248 FNDC8Q8TC99 324 aa15.73■□□□□ 0.11
VPS37B-202ENST00000371248 ENKD1Q9H0I2 346 aa15.73■□□□□ 0.11
VPS37B-202ENST00000371248 ORC6Q9Y5N6 252 aa15.73■□□□□ 0.11
VPS37B-202ENST00000371248 B8ZZF3 427 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 H3BN98 237 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 AQP8O94778 261 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 RCBTB2O95199 551 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 HPRP00739 348 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 F13BP05160 661 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 OSMP13725 252 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 SLC36A3Q495N2 470 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 ALG10Q5BKT4 473 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 RPTNQ6XPR3 784 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 B3GNT6Q6ZMB0 384 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 C3P1Q6ZMU1 363 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 Q6ZPB1 254 aaPredicted RBP15.72■□□□□ 0.11
VPS37B-202ENST00000371248 IGFN1Q86VF2 1251 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 SAMD8Q96LT4 415 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 DOCK7Q96N67 2140 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 PLA2G12AQ9BZM1 189 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 IL20Q9NYY1 176 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 ZNF175Q9Y473 711 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 CDH10Q9Y6N8 788 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 SERPINI2O75830 405 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 NDUFB2O95178 105 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 ACVR2AP27037 513 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 POU1F1P28069 291 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 TLE1Q04724 770 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 ZP4Q12836 540 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 RFX4Q33E94 735 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 ZIK1Q3SY52 487 aaPredicted RBP15.72■□□□□ 0.11
VPS37B-202ENST00000371248 RTL6Q6ICC9 239 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 THSD4Q6ZMP0 1018 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 P4HA3Q7Z4N8 544 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 PARP8Q8N3A8 854 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 ZNF843Q8N446 348 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 PACRGLQ8N7B6 248 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 ABHD3Q8WU67 409 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 TP63Q9H3D4 680 aaPredicted RBP15.72■□□□□ 0.11
VPS37B-202ENST00000371248 CALHM2Q9HA72 323 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 C8orf4Q9NR00 106 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 CLCF1Q9UBD9 225 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 SH3BGRL2Q9UJC5 107 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 TINAGQ9UJW2 476 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 RASD1Q9Y272 281 aa15.72■□□□□ 0.11
VPS37B-202ENST00000371248 ALPK2Q86TB3 2170 aa15.71■□□□□ 0.11
VPS37B-202ENST00000371248 CYTIPO60759 359 aa15.71■□□□□ 0.11
VPS37B-202ENST00000371248 VAMP5O95183 116 aa15.71■□□□□ 0.11
VPS37B-202ENST00000371248 HLA-DOBP13765 273 aa15.71■□□□□ 0.11
VPS37B-202ENST00000371248 PTGER4P35408 488 aa15.71■□□□□ 0.11
VPS37B-202ENST00000371248 RPL4P36578 427 aaKnown RBP15.71■□□□□ 0.11
VPS37B-202ENST00000371248 RAD23AP54725 363 aa15.71■□□□□ 0.11
VPS37B-202ENST00000371248 RASGEF1BQ0VAM2 473 aa15.71■□□□□ 0.11
VPS37B-202ENST00000371248 C1orf185Q5T7R7 199 aa15.71■□□□□ 0.11
VPS37B-202ENST00000371248 RPL13AP3Q6NVV1 102 aa15.71■□□□□ 0.11
VPS37B-202ENST00000371248 RNF128Q8TEB7 428 aa15.71■□□□□ 0.11
VPS37B-202ENST00000371248 OXGR1Q96P68 337 aa15.71■□□□□ 0.11
VPS37B-202ENST00000371248 B3GAT1Q9P2W7 334 aa15.71■□□□□ 0.11
VPS37B-202ENST00000371248 PHF3Q92576 2039 aaKnown RBP15.71■□□□□ 0.11
VPS37B-202ENST00000371248 CHD6Q8TD26 2715 aa15.71■□□□□ 0.1
VPS37B-202ENST00000371248 A0A1W2PNV4 684 aa15.71■□□□□ 0.1
VPS37B-202ENST00000371248 MCIDASD6RGH6 385 aa15.71■□□□□ 0.1
VPS37B-202ENST00000371248 PLGP00747 810 aaPredicted RBP15.71■□□□□ 0.1
VPS37B-202ENST00000371248 CLEC12AQ5QGZ9 265 aa15.71■□□□□ 0.1
VPS37B-202ENST00000371248 NSUN5P2Q63ZY6 315 aa15.71■□□□□ 0.1
VPS37B-202ENST00000371248 ABLIM2Q6H8Q1 611 aa15.71■□□□□ 0.1
VPS37B-202ENST00000371248 Q6ZNX1 250 aa15.71■□□□□ 0.1
VPS37B-202ENST00000371248 SLC43A2Q8N370 569 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms