RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 PPIL3Q9H2H8 161 aaKnown RBP6.67□□□□□ -1.34
CLCN3-202ENST00000360642 KCNN2Q9H2S1 579 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 GHITMQ9H3K2 345 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 ADGRL4Q9HBW9 690 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 HRASLS2Q9NWW9 162 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 MED31Q9Y3C7 131 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 hCG_1807616A0A1W2PRN6 198 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 UBE2QL1A1L167 161 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 TFECO14948 347 aaPredicted RBP6.67□□□□□ -1.34
CLCN3-202ENST00000360642 HYAL3O43820 417 aaPredicted RBP6.67□□□□□ -1.34
CLCN3-202ENST00000360642 SLC19A2O60779 497 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 SC5DO75845 299 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 SOX30O94993 753 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 SLC35E2P0CK97 266 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 GYPEP15421 78 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 DRD1P21728 446 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 MYL9P24844 172 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 AKT2P31751 481 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 RAB38P57729 211 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 ILF3Q12906 894 aaKnown RBP eCLIP6.67□□□□□ -1.34
CLCN3-202ENST00000360642 TBRG1Q3YBR2 411 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 TMEM108Q6UXF1 575 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 ABI3BPQ7Z7G0 1075 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 CDK20Q8IZL9 346 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 LSMEM1Q8N8F7 131 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 OR5W2Q8NH69 310 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 CAPSLQ8WWF8 208 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 SLC7A6Q92536 515 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 CNOT9Q92600 299 aaKnown RBP6.67□□□□□ -1.34
CLCN3-202ENST00000360642 NACC2Q96BF6 587 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 OTULINQ96BN8 352 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 IFT27Q9BW83 186 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 TCEAL2Q9H3H9 227 aaPredicted RBP6.67□□□□□ -1.34
CLCN3-202ENST00000360642 RBFOX1Q9NWB1 397 aaKnown RBP6.67□□□□□ -1.34
CLCN3-202ENST00000360642 SLC35A3Q9Y2D2 325 aa6.67□□□□□ -1.34
CLCN3-202ENST00000360642 WDFY3Q8IZQ1 3526 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 ARHGEF17Q96PE2 2063 aaPredicted RBP6.66□□□□□ -1.34
CLCN3-202ENST00000360642 TRAV27A0A087WT01 109 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 DAPL1A0PJW8 107 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 PRR23D1E9PI22 279 aaPredicted RBP6.66□□□□□ -1.34
CLCN3-202ENST00000360642 E9PI62 339 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 SGK494L7N484 410 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 REM1O75628 298 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 TNFP01375 233 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 NGFRP08138 427 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 SBK2P0C263 348 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 PRR23D2P0DMB1 279 aaPredicted RBP6.66□□□□□ -1.34
CLCN3-202ENST00000360642 HLA-DMAP28067 261 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 PPP1CAP62136 330 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 ZNF85Q03923 595 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 EIF2B5Q13144 721 aaKnown RBP6.66□□□□□ -1.34
CLCN3-202ENST00000360642 WDR45BQ5MNZ6 344 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 HBMQ6B0K9 141 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 CLEC9AQ6UXN8 241 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 PXKQ7Z7A4 578 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 SLC7A5P1Q8MH63 180 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 OR52R1Q8NGF1 315 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 RNF170Q96K19 258 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 TMEM27Q9HBJ8 222 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 TRIM36Q9NQ86 728 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 STARD5Q9NSY2 213 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 BAIAP2Q9UQB8 552 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 KIR2DS5A0A0G2JLQ3 304 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 A0A0G2JNG1 304 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 A0A1B0GWA3 101 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 FAM172BPA6NC97 362 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 KIR2DS3K7RE56 304 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 IDH3BO43837 385 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 IGKV1D-16P01601 117 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 CSF2P04141 144 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 CLUP10909 449 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 CHRNB1P11230 501 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 LYL1P12980 280 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 GABRG2P18507 467 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 ELK1P19419 428 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 F8A1P23610 371 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 RBM34P42696 430 aaKnown RBP6.66□□□□□ -1.34
CLCN3-202ENST00000360642 EMDP50402 254 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 VSX2P58304 361 aaPredicted RBP6.66□□□□□ -1.34
CLCN3-202ENST00000360642 IL18Q14116 193 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 KIR2DS5Q14953 304 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 NDUFA5Q16718 116 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 GPALPP1Q8IXQ4 340 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 SLC43A2Q8N370 569 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 C19orf18Q8NEA5 215 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 SLC2A12Q8TD20 617 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 SLC37A2Q8TED4 501 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 KIRREL1Q96J84 757 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 PGLYRP3Q96LB9 341 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 TBX5Q99593 518 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 MARCH7Q9H992 704 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 ERVMER34-1Q9H9K5 563 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 MCCC2Q9HCC0 563 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 FAM60AQ9NP50 221 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 SERTAD3Q9UJW9 196 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 ZDHHC8Q9ULC8 765 aa6.66□□□□□ -1.34
CLCN3-202ENST00000360642 OR5K3A6NET4 321 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 OR5K4A6NMS3 321 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 FOXS1O43638 330 aa6.65□□□□□ -1.34
CLCN3-202ENST00000360642 IGHV4-34P06331 123 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms