RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 SPAG17Q6Q759 2223 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 BPIFB3P59826 476 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 TEAD2Q15562 447 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 LGALS14Q8TCE9 139 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 DYNLRB1Q9NP97 96 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 MUTYHQ9UIF7 546 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 KLK4Q9Y5K2 254 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 RFX2P48378 723 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 OR10A3P58181 314 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 TRA2BP62995 288 aaKnown RBP8.67□□□□□ -1.02
VPS13A-203ENST00000360280 SH3BP2P78314 561 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 IAH1Q2TAA2 248 aaPredicted RBP8.67□□□□□ -1.02
VPS13A-203ENST00000360280 RPL7L1Q6DKI1 246 aaKnown RBP8.67□□□□□ -1.02
VPS13A-203ENST00000360280 OR2M7Q8NG81 312 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 PHYHIPQ92561 330 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 TMEM106AQ96A25 262 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 TIGITQ495A1 244 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 C3orf38Q5JPI3 329 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 CD276Q5ZPR3 534 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 STEAP1BQ6NZ63 245 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 LRRC18Q8N456 261 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 FUBP1Q96AE4 644 aaKnown RBP8.67□□□□□ -1.02
VPS13A-203ENST00000360280 KLRG1Q96E93 195 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 CCNL2Q96S94 520 aaPredicted RBP8.67□□□□□ -1.02
VPS13A-203ENST00000360280 NUDT22Q9BRQ3 303 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 ALG12Q9BV10 488 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 AKAP11Q9UKA4 1901 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 PEX10O60683 326 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 DHRS11Q6UWP2 260 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 APH1BQ8WW43 257 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 ZNFX1Q9P2E3 1918 aaKnown RBP8.66□□□□□ -1.02
VPS13A-203ENST00000360280 LEFTY2O00292 366 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 NTF3P20783 257 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 MTCP1P56278 107 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 OR7E24Q6IFN5 339 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 ZNF765Q7L2R6 523 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 PQLC3Q8N755 202 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 STRAPQ9Y3F4 350 aaKnown RBP8.66□□□□□ -1.02
VPS13A-203ENST00000360280 SCN9AQ15858 1988 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 FCGR2AP12318 317 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.66□□□□□ -1.02
VPS13A-203ENST00000360280 LCTLQ6UWM7 567 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 RNF113BQ8IZP6 322 aaKnown RBP8.66□□□□□ -1.02
VPS13A-203ENST00000360280 TMUB2Q71RG4 321 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 SMIM12Q96EX1 92 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 LYSMD1Q96S90 227 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 IL1RNP18510 177 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 AHRP35869 848 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 EMC10Q5UCC4 262 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 PRSS35Q8N3Z0 413 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 OR13C2Q8NGS9 318 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 GNPNAT1Q96EK6 184 aaPredicted RBP8.66□□□□□ -1.02
VPS13A-203ENST00000360280 FAM103A1Q9BTL3 118 aaKnown RBP8.66□□□□□ -1.02
VPS13A-203ENST00000360280 C12orf10Q9HB07 376 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 ZNF724A8MTY0 619 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 AP1G1O43747 822 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 TAS2R45P59539 299 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 IQCJQ1A5X6 159 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 OR2G3Q8NGZ4 309 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 TSLPQ969D9 159 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 VN1R3Q9BXE9 311 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 SELENOIQ9C0D9 397 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 HBA1P69905 142 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 GATA6Q92908 595 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 ZNF566Q969W8 418 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 GALNT9Q9HCQ5 603 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 CAMK2AQ9UQM7 478 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 TIMM8AO60220 97 aaPredicted RBP8.66□□□□□ -1.02
VPS13A-203ENST00000360280 GSTP1P09211 210 aaKnown RBP8.66□□□□□ -1.02
VPS13A-203ENST00000360280 IDUAP35475 653 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 ARG2P78540 354 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 GUK1Q16774 197 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 ENTPD8Q5MY95 495 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 GRINAQ7Z429 371 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 NLGN4YQ8NFZ3 816 aaPredicted RBP8.66□□□□□ -1.02
VPS13A-203ENST00000360280 ARHGDIGQ99819 225 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 SMOQ99835 787 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 RNGTTO60942 597 aaKnown RBP8.66□□□□□ -1.02
VPS13A-203ENST00000360280 NAGSQ8N159 534 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 SLC25A32Q9H2D1 315 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 RAD1O60671 282 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 POU3F1Q03052 451 aaPredicted RBP8.66□□□□□ -1.02
VPS13A-203ENST00000360280 PGBD5Q8N414 524 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 OR13C5Q8NGS8 318 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 MUCL1Q96DR8 90 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 NOL4LQ96MY1 436 aaPredicted RBP8.66□□□□□ -1.02
VPS13A-203ENST00000360280 BARX1Q9HBU1 254 aaPredicted RBP8.66□□□□□ -1.02
VPS13A-203ENST00000360280 H3BQ06 376 aaPredicted RBP8.66□□□□□ -1.02
VPS13A-203ENST00000360280 HSPB6O14558 160 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 PFKMP08237 780 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 HTR5AP47898 357 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 MRPL19P49406 292 aaKnown RBP8.66□□□□□ -1.02
VPS13A-203ENST00000360280 ZNF154Q13106 437 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 PLAC9Q5JTB6 97 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 ANKRD53Q8N9V6 530 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 SPHK2Q9NRA0 654 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 ECM29Q5VYK3 1845 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 TPPP2P59282 170 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 PLK5Q496M5 336 aa8.66□□□□□ -1.02
VPS13A-203ENST00000360280 H2BFWTQ7Z2G1 175 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms