RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 VN1R1Q9GZP7 353 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 LAT2Q9GZY6 243 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 NXF5Q9H1B4 397 aaKnown RBP7.43□□□□□ -1.22
CD44-205ENST00000352818 MMP27Q9H306 513 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 ATP13A2Q9NQ11 1180 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 HINT3Q9NQE9 182 aaKnown RBP7.43□□□□□ -1.22
CD44-205ENST00000352818 INPP5EQ9NRR6 644 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 CHCHD3Q9NX63 227 aaKnown RBP7.43□□□□□ -1.22
CD44-205ENST00000352818 COPS7AQ9UBW8 275 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 KCNN3Q9UGI6 736 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 RARRES3Q9UL19 164 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 STUB1Q9UNE7 303 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 PPIEQ9UNP9 301 aaKnown RBP7.43□□□□□ -1.22
CD44-205ENST00000352818 ZNF835Q9Y2P0 537 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 GTF3C1Q12789 2109 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 OR2W5A6NFC9 320 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 SLC22A31A6NKX4 558 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 HAX1O00165 279 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 SCDO00767 359 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 ZNHIT1O43257 154 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 TSPAN2O60636 221 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 ALOX12BO75342 701 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 UTS2O95399 124 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 LIMS3P0CW19 117 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 LIMS4P0CW20 117 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 HSMCR30P0CW71 290 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 SAGP10523 405 aaPredicted RBP7.42□□□□□ -1.22
CD44-205ENST00000352818 UBL4AP11441 157 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 PSMA1P25786 263 aaKnown RBP7.42□□□□□ -1.22
CD44-205ENST00000352818 OPRL1P41146 370 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 SLC1A3P43003 542 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 CAPZA2P47755 286 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 PNLIPRP2P54317 469 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 COPZ1P61923 177 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 LSM3P62310 102 aaKnown RBP7.42□□□□□ -1.22
CD44-205ENST00000352818 RPS4XP62701 263 aaKnown RBP7.42□□□□□ -1.22
CD44-205ENST00000352818 POU4F2Q12837 409 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 TPBGQ13641 420 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 DOC2BQ14184 412 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 DEFB113Q30KQ7 82 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 ZNF404Q494X3 552 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 ANKDD1AQ495B1 522 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 TUBA3EQ6PEY2 450 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 HSDL2Q6YN16 418 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 MEPCEQ7L2J0 689 aaKnown RBP7.42□□□□□ -1.22
CD44-205ENST00000352818 PPP1R32Q7Z5V6 425 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 ATG4DQ86TL0 474 aaPredicted RBP7.42□□□□□ -1.22
CD44-205ENST00000352818 C9orf40Q8IXQ3 194 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 ZNF321PQ8N8H1 164 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 OR1N1Q8NGS0 311 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 OR13C2Q8NGS9 318 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 FNDC8Q8TC99 324 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 TP53INP1Q96A56 240 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 C3orf49Q96BT1 292 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 SGTBQ96EQ0 304 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 FER1L6-AS2Q96M78 137 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 COQ7Q99807 217 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 ZNF649Q9BS31 505 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 YIPF2Q9BWQ6 316 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 OR8D2Q9GZM6 311 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 WWTR1Q9GZV5 400 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 OR51E2Q9H255 320 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 SLC26A1Q9H2B4 701 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 SLC22A11Q9NSA0 550 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 P4HTMQ9NXG6 502 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 HAO2Q9NYQ3 351 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 H2AFY2Q9P0M6 372 aaPredicted RBP7.42□□□□□ -1.22
CD44-205ENST00000352818 LRFN1Q9P244 771 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 CLEC2DQ9UHP7 191 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 KLHL21Q9UJP4 597 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 GPR52Q9Y2T5 361 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 SEC16AO15027 2179 aa7.42□□□□□ -1.22
CD44-205ENST00000352818 EXPH5Q8NEV8 1989 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 A0A075B6Q4 140 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 CCDC182A6NF36 153 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 SAGE2PA6NJ88 616 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 VSTM2BA6NLU5 285 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 RIIAD1A6NNX1 92 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 ALG1L2C9J202 215 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 ZNF670-ZNF695F2Z2N8 137 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 H7C1Q1 480 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 KPNA4O00629 521 aaPredicted RBP7.41□□□□□ -1.22
CD44-205ENST00000352818 ARPC3O15145 178 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 ZNF264O43296 627 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 IDH3BO43837 385 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 EIF4E2O60573 245 aaKnown RBP7.41□□□□□ -1.22
CD44-205ENST00000352818 SCRG1O75711 98 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 GPX5O75715 221 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 OR7A10O76100 309 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 TOXO94900 526 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 NDUFB2O95178 105 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 IFNGP01579 166 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 TPOP07202 933 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 PEPDP12955 493 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 APEHP13798 732 aaKnown RBP7.41□□□□□ -1.22
CD44-205ENST00000352818 HPGDP15428 266 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 ZNF12P17014 697 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 ZNF3P17036 446 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 HK1P19367 917 aa7.41□□□□□ -1.22
CD44-205ENST00000352818 GALP22466 123 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms