RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 TFAP2EQ6VUC0 442 aa14.27□□□□□ -0.12
RAB5C-201ENST00000346213 STAC2Q6ZMT1 411 aa14.27□□□□□ -0.12
RAB5C-201ENST00000346213 FCRLAQ7L513 359 aa14.27□□□□□ -0.12
RAB5C-201ENST00000346213 OR6K3Q8NGY3 331 aa14.27□□□□□ -0.12
RAB5C-201ENST00000346213 RNF217Q8TC41 542 aa14.27□□□□□ -0.12
RAB5C-201ENST00000346213 DHRS1Q96LJ7 313 aa14.27□□□□□ -0.12
RAB5C-201ENST00000346213 GRIP2Q9C0E4 1043 aa14.27□□□□□ -0.12
RAB5C-201ENST00000346213 CLEC4MQ9H2X3 399 aaPredicted RBP14.27□□□□□ -0.12
RAB5C-201ENST00000346213 ITGB1BP2Q9UKP3 347 aa14.27□□□□□ -0.12
RAB5C-201ENST00000346213 MCTS1Q9ULC4 181 aaKnown RBP14.27□□□□□ -0.12
RAB5C-201ENST00000346213 PROCRQ9UNN8 238 aa14.27□□□□□ -0.12
RAB5C-201ENST00000346213 AKAP6Q13023 2319 aa14.27□□□□□ -0.12
RAB5C-201ENST00000346213 TEP1Q99973 2627 aaKnown RBP14.27□□□□□ -0.12
RAB5C-201ENST00000346213 TRIM64CA6NLI5 447 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 E9PQ18 207 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 SYNGR4O95473 234 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 LGI1O95970 557 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 FCGR2AP12318 317 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 TACR3P29371 465 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 POLR2IP36954 125 aaKnown RBP14.26□□□□□ -0.13
RAB5C-201ENST00000346213 KEAP1Q14145 624 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 RNF220Q5VTB9 566 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 ABLIM2Q6H8Q1 611 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 GALNT5Q7Z7M9 940 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 ATG4DQ86TL0 474 aaPredicted RBP14.26□□□□□ -0.13
RAB5C-201ENST00000346213 OR10G2Q8NGC3 310 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 OR4D11Q8NGI4 311 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 OIT3Q8WWZ8 545 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 PRR14Q9BWN1 585 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 POLDIP3Q9BY77 421 aaKnown RBP14.26□□□□□ -0.13
RAB5C-201ENST00000346213 PRRG4Q9BZD6 226 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 PLEKHF2Q9H8W4 249 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 HHATLQ9HCP6 504 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 NDUFA13Q9P0J0 144 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 KLHL13Q9P2N7 655 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 CHRNA9Q9UGM1 479 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 A0A087WXM4 84 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 ARRDC5A6NEK1 342 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 ZNF716A6NP11 495 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 FFAR1O14842 300 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 DBIP07108 87 aaKnown RBP14.26□□□□□ -0.13
RAB5C-201ENST00000346213 PABPC4LP0CB38 370 aaKnown RBP14.26□□□□□ -0.13
RAB5C-201ENST00000346213 POU2F1P14859 743 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 IL7RP16871 459 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 NR1H2P55055 460 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 RAC3P60763 192 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 ISL1P61371 349 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 TMPPEQ6ZT21 453 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 GRINAQ7Z429 371 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 CCDC103Q8IW40 242 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 ZNF563Q8TA94 476 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 CPNE4Q96A23 557 aaPredicted RBP14.26□□□□□ -0.13
RAB5C-201ENST00000346213 ADAM19Q9H013 955 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 PRSS50Q9UI38 385 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 SLC9A8Q9Y2E8 581 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 HSPE1-MOB4S4R3N1 261 aa14.26□□□□□ -0.13
RAB5C-201ENST00000346213 TMED7-TICAM2A0A0A6YYA0 188 aa14.25□□□□□ -0.13
RAB5C-201ENST00000346213 CCNB2O95067 398 aa14.25□□□□□ -0.13
RAB5C-201ENST00000346213 ATP6V1B1P15313 513 aa14.25□□□□□ -0.13
RAB5C-201ENST00000346213 HTR2AP28223 471 aa14.25□□□□□ -0.13
RAB5C-201ENST00000346213 SMIM11AP58511 58 aa14.25□□□□□ -0.13
RAB5C-201ENST00000346213 RBM48Q5RL73 367 aaKnown RBP14.25□□□□□ -0.13
RAB5C-201ENST00000346213 DHRS4L2Q6PKH6 230 aa14.25□□□□□ -0.13
RAB5C-201ENST00000346213 SEZ6L2Q6UXD5 910 aa14.25□□□□□ -0.13
RAB5C-201ENST00000346213 KIF18BQ86Y91 864 aa14.25□□□□□ -0.13
RAB5C-201ENST00000346213 CMIPQ8IY22 773 aa14.25□□□□□ -0.13
RAB5C-201ENST00000346213 GABRG1Q8N1C3 465 aa14.25□□□□□ -0.13
RAB5C-201ENST00000346213 SETD9Q8NE22 299 aa14.25□□□□□ -0.13
RAB5C-201ENST00000346213 OR52J3Q8NH60 311 aa14.25□□□□□ -0.13
RAB5C-201ENST00000346213 ADAMTS16Q8TE57 1224 aa14.25□□□□□ -0.13
RAB5C-201ENST00000346213 FBLIM1Q8WUP2 373 aa14.25□□□□□ -0.13
RAB5C-201ENST00000346213 HDAC2Q92769 488 aaKnown RBP14.25□□□□□ -0.13
RAB5C-201ENST00000346213 ITFG2Q969R8 447 aa14.25□□□□□ -0.13
RAB5C-201ENST00000346213 FEVQ99581 238 aa14.25□□□□□ -0.13
RAB5C-201ENST00000346213 PITX2Q99697 317 aa14.25□□□□□ -0.13
RAB5C-201ENST00000346213 GABARAPL3Q9BY60 117 aa14.25□□□□□ -0.13
RAB5C-201ENST00000346213 RIBC2Q9H4K1 309 aa14.25□□□□□ -0.13
RAB5C-201ENST00000346213 PAQR5Q9NXK6 330 aaPredicted RBP14.25□□□□□ -0.13
RAB5C-201ENST00000346213 POFUT2Q9Y2G5 429 aa14.25□□□□□ -0.13
RAB5C-201ENST00000346213 TMED7Q9Y3B3 224 aa14.25□□□□□ -0.13
RAB5C-201ENST00000346213 PRR14LQ5THK1 2151 aa14.25□□□□□ -0.13
RAB5C-201ENST00000346213 MAP1AP78559 2803 aaPredicted RBP14.25□□□□□ -0.13
RAB5C-201ENST00000346213 MPDZO75970 2070 aa14.25□□□□□ -0.13
RAB5C-201ENST00000346213 SMIM31A0A1B0GVY4 71 aa14.24□□□□□ -0.13
RAB5C-201ENST00000346213 FAAHO00519 579 aa14.24□□□□□ -0.13
RAB5C-201ENST00000346213 TPST2O60704 377 aa14.24□□□□□ -0.13
RAB5C-201ENST00000346213 CYTIPO60759 359 aa14.24□□□□□ -0.13
RAB5C-201ENST00000346213 PLGP00747 810 aaPredicted RBP14.24□□□□□ -0.13
RAB5C-201ENST00000346213 FOXG1P55316 489 aaPredicted RBP14.24□□□□□ -0.13
RAB5C-201ENST00000346213 IL1RL1Q01638 556 aa14.24□□□□□ -0.13
RAB5C-201ENST00000346213 NPRL3Q12980 569 aa14.24□□□□□ -0.13
RAB5C-201ENST00000346213 ZNF311Q5JNZ3 666 aa14.24□□□□□ -0.13
RAB5C-201ENST00000346213 FOXB2Q5VYV0 432 aa14.24□□□□□ -0.13
RAB5C-201ENST00000346213 RBM45Q8IUH3 476 aaKnown RBP14.24□□□□□ -0.13
RAB5C-201ENST00000346213 VANGL1Q8TAA9 524 aaPredicted RBP14.24□□□□□ -0.13
RAB5C-201ENST00000346213 ZC3HAV1LQ96H79 300 aaKnown RBP14.24□□□□□ -0.13
RAB5C-201ENST00000346213 DACH2Q96NX9 599 aa14.24□□□□□ -0.13
RAB5C-201ENST00000346213 ALPK1Q96QP1 1244 aa14.24□□□□□ -0.13
RAB5C-201ENST00000346213 NMNAT1Q9HAN9 279 aaPredicted RBP14.24□□□□□ -0.13
RAB5C-201ENST00000346213 BCO1Q9HAY6 547 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms