RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 HIKESHIQ53FT3 197 aa12.63□□□□□ -0.39
HMGN3-202ENST00000344726 SWT1Q5T5J6 900 aaKnown RBP12.63□□□□□ -0.39
HMGN3-202ENST00000344726 INTS11Q5TA45 600 aaKnown RBP12.63□□□□□ -0.39
HMGN3-202ENST00000344726 ZNF613Q6PF04 617 aa12.63□□□□□ -0.39
HMGN3-202ENST00000344726 H1FNTQ75WM6 255 aaPredicted RBP12.63□□□□□ -0.39
HMGN3-202ENST00000344726 SSX8Q7RTT4 187 aa12.63□□□□□ -0.39
HMGN3-202ENST00000344726 WDFY1Q8IWB7 410 aa12.63□□□□□ -0.39
HMGN3-202ENST00000344726 C17orf78Q8N4C9 275 aa12.63□□□□□ -0.39
HMGN3-202ENST00000344726 POU5F2Q8N7G0 328 aa12.63□□□□□ -0.39
HMGN3-202ENST00000344726 OR6S1Q8NH40 331 aa12.63□□□□□ -0.39
HMGN3-202ENST00000344726 SMAP2Q8WU79 429 aaPredicted RBP12.63□□□□□ -0.39
HMGN3-202ENST00000344726 OXGR1Q96P68 337 aa12.63□□□□□ -0.39
HMGN3-202ENST00000344726 ECSITQ9BQ95 431 aa12.63□□□□□ -0.39
HMGN3-202ENST00000344726 TMEM43Q9BTV4 400 aa12.63□□□□□ -0.39
HMGN3-202ENST00000344726 CXorf56Q9H5V9 222 aa12.63□□□□□ -0.39
HMGN3-202ENST00000344726 MRGBPQ9NV56 204 aa12.63□□□□□ -0.39
HMGN3-202ENST00000344726 SELENONQ9NZV5 590 aa12.63□□□□□ -0.39
HMGN3-202ENST00000344726 B3GALT5Q9Y2C3 310 aa12.63□□□□□ -0.39
HMGN3-202ENST00000344726 CAPN7Q9Y6W3 813 aa12.63□□□□□ -0.39
HMGN3-202ENST00000344726 CR1P17927 2039 aa12.62□□□□□ -0.39
HMGN3-202ENST00000344726 E7EQL1 145 aa12.62□□□□□ -0.39
HMGN3-202ENST00000344726 M0R1B8 84 aa12.62□□□□□ -0.39
HMGN3-202ENST00000344726 CHP2O43745 196 aa12.62□□□□□ -0.39
HMGN3-202ENST00000344726 NDUFS7O75251 213 aa12.62□□□□□ -0.39
HMGN3-202ENST00000344726 NPPAP01160 153 aa12.62□□□□□ -0.39
HMGN3-202ENST00000344726 TNFRSF1BP20333 461 aa12.62□□□□□ -0.39
HMGN3-202ENST00000344726 CDH11P55287 796 aa12.62□□□□□ -0.39
HMGN3-202ENST00000344726 ATP5J2P56134 94 aa12.62□□□□□ -0.39
HMGN3-202ENST00000344726 TMEM108Q6UXF1 575 aa12.62□□□□□ -0.39
HMGN3-202ENST00000344726 NHLRC1Q6VVB1 395 aa12.62□□□□□ -0.39
HMGN3-202ENST00000344726 B3GLCTQ6Y288 498 aa12.62□□□□□ -0.39
HMGN3-202ENST00000344726 ADPRHL1Q8NDY3 354 aa12.62□□□□□ -0.39
HMGN3-202ENST00000344726 OR1K1Q8NGR3 316 aa12.62□□□□□ -0.39
HMGN3-202ENST00000344726 ADAMTS16Q8TE57 1224 aa12.62□□□□□ -0.39
HMGN3-202ENST00000344726 RCN3Q96D15 328 aa12.62□□□□□ -0.39
HMGN3-202ENST00000344726 BOD1Q96IK1 185 aa12.62□□□□□ -0.39
HMGN3-202ENST00000344726 SH3GL1Q99961 368 aa12.62□□□□□ -0.39
HMGN3-202ENST00000344726 TRAF4Q9BUZ4 470 aaPredicted RBP12.62□□□□□ -0.39
HMGN3-202ENST00000344726 LINC00470Q9BZP3 86 aa12.62□□□□□ -0.39
HMGN3-202ENST00000344726 PCDHAC1Q9H158 963 aa12.62□□□□□ -0.39
HMGN3-202ENST00000344726 NELFAQ9H3P2 528 aa12.62□□□□□ -0.39
HMGN3-202ENST00000344726 CISD1Q9NZ45 108 aaKnown RBP12.62□□□□□ -0.39
HMGN3-202ENST00000344726 GMPR2Q9P2T1 348 aaKnown RBP12.62□□□□□ -0.39
HMGN3-202ENST00000344726 RCE1Q9Y256 329 aa12.62□□□□□ -0.39
HMGN3-202ENST00000344726 AMDHD2Q9Y303 409 aa12.62□□□□□ -0.39
HMGN3-202ENST00000344726 LOC102725191A0A1B0GVB3 256 aa12.61□□□□□ -0.39
HMGN3-202ENST00000344726 ZNF587BE7ETH6 402 aa12.61□□□□□ -0.39
HMGN3-202ENST00000344726 TMCC2O75069 709 aa12.61□□□□□ -0.39
HMGN3-202ENST00000344726 KRT33AO76009 404 aa12.61□□□□□ -0.39
HMGN3-202ENST00000344726 IGHV4-39P01824 125 aa12.61□□□□□ -0.39
HMGN3-202ENST00000344726 PTAFRP25105 342 aa12.61□□□□□ -0.39
HMGN3-202ENST00000344726 TGFBR3Q03167 851 aa12.61□□□□□ -0.39
HMGN3-202ENST00000344726 KRTAP1-1Q07627 177 aa12.61□□□□□ -0.39
HMGN3-202ENST00000344726 TBRG1Q3YBR2 411 aa12.61□□□□□ -0.39
HMGN3-202ENST00000344726 PHYHD1Q5SRE7 291 aa12.61□□□□□ -0.39
HMGN3-202ENST00000344726 KLHL17Q6TDP4 642 aa12.61□□□□□ -0.39
HMGN3-202ENST00000344726 ABHD12BQ7Z5M8 362 aaPredicted RBP12.61□□□□□ -0.39
HMGN3-202ENST00000344726 TMEM123Q8N131 208 aa12.61□□□□□ -0.39
HMGN3-202ENST00000344726 SLC26A7Q8TE54 656 aa12.61□□□□□ -0.39
HMGN3-202ENST00000344726 BCL2L2Q92843 193 aaPredicted RBP12.61□□□□□ -0.39
HMGN3-202ENST00000344726 ZNF837Q96EG3 531 aaPredicted RBP12.61□□□□□ -0.39
HMGN3-202ENST00000344726 OR2M2Q96R28 347 aa12.61□□□□□ -0.39
HMGN3-202ENST00000344726 EPYCQ99645 322 aa12.61□□□□□ -0.39
HMGN3-202ENST00000344726 BDH2Q9BUT1 245 aa12.61□□□□□ -0.39
HMGN3-202ENST00000344726 CMTM6Q9NX76 183 aa12.61□□□□□ -0.39
HMGN3-202ENST00000344726 GDF2Q9UK05 429 aaPredicted RBP12.61□□□□□ -0.39
HMGN3-202ENST00000344726 SLC7A7Q9UM01 511 aa12.61□□□□□ -0.39
HMGN3-202ENST00000344726 OR6C65A6NJZ3 312 aa12.6□□□□□ -0.39
HMGN3-202ENST00000344726 RPL36A-HNRNPH2H7BZ11 118 aa12.6□□□□□ -0.39
HMGN3-202ENST00000344726 PLPP3O14495 311 aa12.6□□□□□ -0.39
HMGN3-202ENST00000344726 SLC22A2O15244 555 aa12.6□□□□□ -0.39
HMGN3-202ENST00000344726 NQO1P15559 274 aaKnown RBP12.6□□□□□ -0.39
HMGN3-202ENST00000344726 PRPS1P60891 318 aa12.6□□□□□ -0.39
HMGN3-202ENST00000344726 IL1RL1Q01638 556 aa12.6□□□□□ -0.39
HMGN3-202ENST00000344726 ROR2Q01974 943 aaKnown RBP12.6□□□□□ -0.39
HMGN3-202ENST00000344726 TNK1Q13470 666 aa12.6□□□□□ -0.39
HMGN3-202ENST00000344726 C1DQ13901 141 aaKnown RBP12.6□□□□□ -0.39
HMGN3-202ENST00000344726 VEZF1Q14119 521 aa12.6□□□□□ -0.39
HMGN3-202ENST00000344726 MFSD13AQ14CX5 517 aa12.6□□□□□ -0.39
HMGN3-202ENST00000344726 SLC22A25Q6T423 547 aa12.6□□□□□ -0.39
HMGN3-202ENST00000344726 DTX2Q86UW9 622 aa12.6□□□□□ -0.39
HMGN3-202ENST00000344726 CARM1Q86X55 608 aa12.6□□□□□ -0.39
HMGN3-202ENST00000344726 TREML1Q86YW5 311 aa12.6□□□□□ -0.39
HMGN3-202ENST00000344726 SCAIQ8N9R8 606 aa12.6□□□□□ -0.39
HMGN3-202ENST00000344726 PCYOX1LQ8NBM8 494 aa12.6□□□□□ -0.39
HMGN3-202ENST00000344726 TXNDC15Q96J42 360 aa12.6□□□□□ -0.39
HMGN3-202ENST00000344726 PRSS27Q9BQR3 290 aa12.6□□□□□ -0.39
HMGN3-202ENST00000344726 ZNF426Q9BUY5 554 aa12.6□□□□□ -0.39
HMGN3-202ENST00000344726 EMC6Q9BV81 110 aa12.6□□□□□ -0.39
HMGN3-202ENST00000344726 GPR35Q9HC97 309 aa12.6□□□□□ -0.39
HMGN3-202ENST00000344726 GID8Q9NWU2 228 aa12.6□□□□□ -0.39
HMGN3-202ENST00000344726 MED29Q9NX70 200 aa12.6□□□□□ -0.39
HMGN3-202ENST00000344726 MRPL39Q9NYK5 338 aaKnown RBP12.6□□□□□ -0.39
HMGN3-202ENST00000344726 MGAT4BQ9UQ53 548 aa12.6□□□□□ -0.39
HMGN3-202ENST00000344726 SH3GLB1Q9Y371 365 aa12.6□□□□□ -0.39
HMGN3-202ENST00000344726 CORINQ9Y5Q5 1042 aa12.6□□□□□ -0.39
HMGN3-202ENST00000344726 RTTNQ86VV8 2226 aa12.6□□□□□ -0.39
HMGN3-202ENST00000344726 CHD3Q12873 2000 aaKnown RBP12.59□□□□□ -0.39
HMGN3-202ENST00000344726 A0A096LPE4 126 aa12.59□□□□□ -0.39
HMGN3-202ENST00000344726 A0A1W2PPZ6 126 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms