RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 PCDHGB1Q9Y5G3 927 aa7.21□□□□□ -1.26
KPNA1-201ENST00000344337 CACNA1BQ00975 2339 aa7.21□□□□□ -1.26
KPNA1-201ENST00000344337 SYT7O43581 403 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 RAF1P04049 648 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 GAAP10253 952 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 CCL5P13501 91 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 CAMK2DQ13557 499 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 C14orf28Q4W4Y0 310 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 YIF1BQ5BJH7 314 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 TRIM61Q5EBN2 209 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 PRSS41Q7RTY9 318 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 TTLQ8NG68 377 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 OR2T4Q8NH00 348 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 POP5Q969H6 163 aaKnown RBP7.2□□□□□ -1.26
KPNA1-201ENST00000344337 DTD2Q96FN9 168 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 HINT2Q9BX68 163 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 UNKLQ9H9P5 680 aaKnown RBP7.2□□□□□ -1.26
KPNA1-201ENST00000344337 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.2□□□□□ -1.268e-8■■■■■ 40.2
KPNA1-201ENST00000344337 TCRBV21S2A2A0A5A6 115 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 ZAR1LA6NP61 321 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 SHISA8B8ZZ34 492 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 NSA2O95478 260 aaKnown RBP7.2□□□□□ -1.26
KPNA1-201ENST00000344337 TSPAN15O95858 294 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 POU3F2P20265 443 aaPredicted RBP7.2□□□□□ -1.26
KPNA1-201ENST00000344337 SELENOPP49908 381 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 MAP2K6P52564 334 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 GPR50Q13585 617 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 IRF4Q15306 451 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 AANATQ16613 207 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 GLYR1Q49A26 553 aaPredicted RBP7.2□□□□□ -1.26
KPNA1-201ENST00000344337 PRAMEF20Q5VT98 475 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 TRAPPC6BQ86SZ2 158 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 TCEAL8Q8IYN2 117 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 LINC00052Q96N35 136 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 SERINC2Q96SA4 455 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 TEAD3Q99594 435 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 SSX3Q99909 188 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 WASH4PA8MWX3 477 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 PRAMEF4O60810 478 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 NDUFB2O95178 105 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 C1QBP02746 253 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 AVPR2P30518 371 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 KCNJ5P48544 419 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 EVX1P49640 407 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 ELAVL3Q14576 367 aaKnown RBP7.2□□□□□ -1.26
KPNA1-201ENST00000344337 PRAMEF9Q5VWM5 478 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 TMUB2Q71RG4 321 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 RASGRP3Q8IV61 690 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 GLB1L2Q8IW92 636 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 ZNF619Q8N2I2 560 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 HSD17B11Q8NBQ5 300 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 C17orf47Q8NEP4 570 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 UBALD1Q8TB05 177 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 ALG12Q9BV10 488 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 C1QTNF2Q9BXJ5 285 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 POTEKPQ9BYX7 375 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 EP300Q09472 2414 aaPredicted RBP7.2□□□□□ -1.26
KPNA1-201ENST00000344337 B3GALNT1O75752 331 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 LALBAP00709 142 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 IGF2P01344 180 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 DAOP14920 347 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 HNF1AP20823 631 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 TAS2R43P59537 309 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 SIRPAP78324 504 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 NOGQ13253 232 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 IGSF11Q5DX21 431 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 H3F3CQ6NXT2 135 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 LAS2Q8IYD9 372 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 ESRP2Q9H6T0 727 aaKnown RBP7.2□□□□□ -1.26
KPNA1-201ENST00000344337 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.2□□□□□ -1.26
KPNA1-201ENST00000344337 B8ZZF3 427 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 PYCARD-AS1I3L0S3 204 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 GMDSO60547 372 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 MTRF1O75570 445 aaKnown RBP7.2□□□□□ -1.26
KPNA1-201ENST00000344337 SNRPNP63162 240 aaKnown RBP7.2□□□□□ -1.26
KPNA1-201ENST00000344337 TSPAN31Q12999 210 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 AFMIDQ63HM1 303 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 TEX261Q6UWH6 196 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 FBXW12Q6X9E4 464 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 MBOAT2Q6ZWT7 520 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 FBXL6Q8N531 539 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 C12orf45Q8N5I9 185 aaPredicted RBP7.2□□□□□ -1.26
KPNA1-201ENST00000344337 BADQ92934 168 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 PGAM5Q96HS1 289 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 MYNNQ9NPC7 610 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 FBXO7Q9Y3I1 522 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 U3KQ87 197 aa7.2□□□□□ -1.26
KPNA1-201ENST00000344337 A0A1B0GWA3 101 aa7.19□□□□□ -1.26
KPNA1-201ENST00000344337 PRRT4C9JH25 899 aa7.19□□□□□ -1.26
KPNA1-201ENST00000344337 CFIP05156 583 aa7.19□□□□□ -1.26
KPNA1-201ENST00000344337 PNMTP11086 282 aa7.19□□□□□ -1.26
KPNA1-201ENST00000344337 S100A11P31949 105 aa7.19□□□□□ -1.26
KPNA1-201ENST00000344337 SEC61A1P61619 476 aaKnown RBP7.19□□□□□ -1.26
KPNA1-201ENST00000344337 HHEXQ03014 270 aa7.19□□□□□ -1.26
KPNA1-201ENST00000344337 RAB33AQ14088 237 aa7.19□□□□□ -1.26
KPNA1-201ENST00000344337 C21orf62-AS1Q17RA5 79 aa7.19□□□□□ -1.26
KPNA1-201ENST00000344337 C16orf47Q6ZP98 133 aaPredicted RBP7.19□□□□□ -1.26
KPNA1-201ENST00000344337 SLC16A13Q7RTY0 426 aa7.19□□□□□ -1.26
KPNA1-201ENST00000344337 MRPL10Q7Z7H8 261 aaKnown RBP7.19□□□□□ -1.26
KPNA1-201ENST00000344337 ARRDC3Q96B67 414 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms