RNA–Protein interactions for RNA: ENST00000343916.7

COL9A3-201, Transcript of collagen type IX alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-201ENST00000343916 TMEM72A0PK05 275 aa17.61■□□□□ 0.41
COL9A3-201ENST00000343916 ARL6IP5O75915 188 aa17.61■□□□□ 0.41
COL9A3-201ENST00000343916 PIAS2O75928 621 aa17.61■□□□□ 0.41
COL9A3-201ENST00000343916 HLA-DMAP28067 261 aa17.61■□□□□ 0.41
COL9A3-201ENST00000343916 HTR2BP41595 481 aa17.61■□□□□ 0.41
COL9A3-201ENST00000343916 RPS27P42677 84 aaKnown RBP17.61■□□□□ 0.41
COL9A3-201ENST00000343916 C1QL3Q5VWW1 255 aa17.61■□□□□ 0.41
COL9A3-201ENST00000343916 MTFR2Q6P444 385 aa17.61■□□□□ 0.41
COL9A3-201ENST00000343916 MARCH3Q86UD3 253 aa17.61■□□□□ 0.41
COL9A3-201ENST00000343916 SLITRK4Q8IW52 837 aa17.61■□□□□ 0.41
COL9A3-201ENST00000343916 TAAR8Q969N4 342 aa17.61■□□□□ 0.41
COL9A3-201ENST00000343916 ZFP3Q96NJ6 502 aa17.61■□□□□ 0.41
COL9A3-201ENST00000343916 DERL3Q96Q80 235 aa17.61■□□□□ 0.41
COL9A3-201ENST00000343916 SLC25A18Q9H1K4 315 aa17.61■□□□□ 0.41
COL9A3-201ENST00000343916 RXFP3Q9NSD7 469 aa17.61■□□□□ 0.41
COL9A3-201ENST00000343916 MMACHCQ9Y4U1 282 aa17.61■□□□□ 0.41
COL9A3-201ENST00000343916 CFAP54Q96N23 3096 aa17.6■□□□□ 0.41
COL9A3-201ENST00000343916 FER1L5A0AVI2 2057 aa17.6■□□□□ 0.41
COL9A3-201ENST00000343916 PIN1P1O15428 100 aa17.6■□□□□ 0.41
COL9A3-201ENST00000343916 ZFPL1O95159 310 aa17.6■□□□□ 0.41
COL9A3-201ENST00000343916 CD3GP09693 182 aa17.6■□□□□ 0.41
COL9A3-201ENST00000343916 SDHBP21912 280 aa17.6■□□□□ 0.41
COL9A3-201ENST00000343916 ITPKBP27987 946 aa17.6■□□□□ 0.41
COL9A3-201ENST00000343916 SDHAP31040 664 aa17.6■□□□□ 0.41
COL9A3-201ENST00000343916 FAPQ12884 760 aa17.6■□□□□ 0.41
COL9A3-201ENST00000343916 ISXQ2M1V0 245 aa17.6■□□□□ 0.41
COL9A3-201ENST00000343916 GRPEL2Q8TAA5 225 aa17.6■□□□□ 0.41
COL9A3-201ENST00000343916 TSPAN10Q9H1Z9 355 aaPredicted RBP17.6■□□□□ 0.41
COL9A3-201ENST00000343916 SYNDIG1Q9H7V2 258 aa17.6■□□□□ 0.41
COL9A3-201ENST00000343916 TVP23AA6NH52 213 aa17.6■□□□□ 0.41
COL9A3-201ENST00000343916 SMLR1H3BR10 107 aa17.6■□□□□ 0.41
COL9A3-201ENST00000343916 OR8G3PP0DMU2 310 aa17.6■□□□□ 0.41
COL9A3-201ENST00000343916 ARSBP15848 533 aa17.6■□□□□ 0.41
COL9A3-201ENST00000343916 AHCYP23526 432 aa17.6■□□□□ 0.41
COL9A3-201ENST00000343916 SLC6A1P30531 599 aa17.6■□□□□ 0.41
COL9A3-201ENST00000343916 CSF2RBP32927 897 aa17.6■□□□□ 0.41
COL9A3-201ENST00000343916 SNRPD2P62316 118 aaKnown RBP17.6■□□□□ 0.41
COL9A3-201ENST00000343916 EBPQ15125 230 aaKnown RBP17.6■□□□□ 0.41
COL9A3-201ENST00000343916 HSD17B12Q53GQ0 312 aa17.6■□□□□ 0.41
COL9A3-201ENST00000343916 OTPQ5XKR4 325 aa17.6■□□□□ 0.41
COL9A3-201ENST00000343916 SHISA6Q6ZSJ9 500 aa17.6■□□□□ 0.41
COL9A3-201ENST00000343916 BMPERQ8N8U9 685 aa17.6■□□□□ 0.41
COL9A3-201ENST00000343916 CADM4Q8NFZ8 388 aa17.6■□□□□ 0.41
COL9A3-201ENST00000343916 C1orf216Q8TAB5 229 aa17.6■□□□□ 0.41
COL9A3-201ENST00000343916 RNF166Q96A37 237 aaPredicted RBP17.6■□□□□ 0.41
COL9A3-201ENST00000343916 OR1F2PQ96R84 312 aa17.6■□□□□ 0.41
COL9A3-201ENST00000343916 CHRNA10Q9GZZ6 450 aa17.6■□□□□ 0.41
COL9A3-201ENST00000343916 RAB33BQ9H082 229 aa17.6■□□□□ 0.41
COL9A3-201ENST00000343916 GALNT9Q9HCQ5 603 aa17.6■□□□□ 0.41
COL9A3-201ENST00000343916 EXOSC3Q9NQT5 275 aaKnown RBP17.6■□□□□ 0.41
COL9A3-201ENST00000343916 ARID1BQ8NFD5 2236 aaPredicted RBP17.59■□□□□ 0.41
COL9A3-201ENST00000343916 INMT-MINDY4F8WBC2 141 aa17.59■□□□□ 0.41
COL9A3-201ENST00000343916 NUDT14O95848 222 aa17.59■□□□□ 0.41
COL9A3-201ENST00000343916 GPANK1O95872 356 aa17.59■□□□□ 0.41
COL9A3-201ENST00000343916 BCKDHBP21953 392 aa17.59■□□□□ 0.41
COL9A3-201ENST00000343916 IL12BP29460 328 aa17.59■□□□□ 0.41
COL9A3-201ENST00000343916 UQCRC1P31930 480 aa17.59■□□□□ 0.41
COL9A3-201ENST00000343916 MESTQ5EB52 335 aa17.59■□□□□ 0.41
COL9A3-201ENST00000343916 PYHIN1Q6K0P9 492 aa17.59■□□□□ 0.41
COL9A3-201ENST00000343916 IZUMO1Q8IYV9 350 aa17.59■□□□□ 0.41
COL9A3-201ENST00000343916 CEP76Q8TAP6 659 aa17.59■□□□□ 0.41
COL9A3-201ENST00000343916 TSPAN32Q96QS1 320 aa17.59■□□□□ 0.41
COL9A3-201ENST00000343916 GRHPRQ9UBQ7 328 aa17.59■□□□□ 0.41
COL9A3-201ENST00000343916 ORC5O43913 435 aa17.59■□□□□ 0.41
COL9A3-201ENST00000343916 ADRB1P08588 477 aa17.59■□□□□ 0.41
COL9A3-201ENST00000343916 SRMP19623 302 aa17.59■□□□□ 0.41
COL9A3-201ENST00000343916 BTCP35070 178 aa17.59■□□□□ 0.41
COL9A3-201ENST00000343916 DGCR2P98153 550 aa17.59■□□□□ 0.41
COL9A3-201ENST00000343916 BIKQ13323 160 aa17.59■□□□□ 0.41
COL9A3-201ENST00000343916 IL10RAQ13651 578 aa17.59■□□□□ 0.41
COL9A3-201ENST00000343916 ELAVL1Q15717 326 aaKnown RBP17.59■□□□□ 0.41
COL9A3-201ENST00000343916 FAM209AQ5JX71 171 aa17.59■□□□□ 0.41
COL9A3-201ENST00000343916 ZFAND1Q8TCF1 268 aa17.59■□□□□ 0.41
COL9A3-201ENST00000343916 LIPHQ8WWY8 451 aa17.59■□□□□ 0.41
COL9A3-201ENST00000343916 RGP1Q92546 391 aaPredicted RBP17.59■□□□□ 0.41
COL9A3-201ENST00000343916 CITED4Q96RK1 184 aa17.59■□□□□ 0.41
COL9A3-201ENST00000343916 UBE2ZQ9H832 354 aaPredicted RBP17.59■□□□□ 0.41
COL9A3-201ENST00000343916 MCUBQ9NWR8 336 aa17.59■□□□□ 0.41
COL9A3-201ENST00000343916 TCRBV16S1A1N1A0A5B0 115 aa17.58■□□□□ 0.41
COL9A3-201ENST00000343916 AKR7A2O43488 359 aa17.58■□□□□ 0.41
COL9A3-201ENST00000343916 SLC43A1O75387 559 aa17.58■□□□□ 0.41
COL9A3-201ENST00000343916 GATBO75879 557 aaKnown RBP17.58■□□□□ 0.41
COL9A3-201ENST00000343916 EPHA4P54764 986 aa17.58■□□□□ 0.41
COL9A3-201ENST00000343916 SLC36A2Q495M3 483 aa17.58■□□□□ 0.41
COL9A3-201ENST00000343916 OR6V1Q8N148 313 aa17.58■□□□□ 0.41
COL9A3-201ENST00000343916 ZNF433Q8N7K0 673 aaPredicted RBP17.58■□□□□ 0.41
COL9A3-201ENST00000343916 EXD3Q8N9H8 876 aa17.58■□□□□ 0.41
COL9A3-201ENST00000343916 ZNF671Q8TAW3 534 aa17.58■□□□□ 0.41
COL9A3-201ENST00000343916 LGALS14Q8TCE9 139 aa17.58■□□□□ 0.41
COL9A3-201ENST00000343916 GFI1Q99684 422 aa17.58■□□□□ 0.41
COL9A3-201ENST00000343916 ZNF304Q9HCX3 659 aa17.58■□□□□ 0.41
COL9A3-201ENST00000343916 MKL2Q9ULH7 1088 aa17.58■□□□□ 0.41
COL9A3-201ENST00000343916 A0A1B0GTH9 108 aa17.58■□□□□ 0.4
COL9A3-201ENST00000343916 ZNF780AO75290 641 aaPredicted RBP17.58■□□□□ 0.4
COL9A3-201ENST00000343916 PLA1AQ53H76 456 aa17.58■□□□□ 0.4
COL9A3-201ENST00000343916 ZNF684Q5T5D7 378 aa17.58■□□□□ 0.4
COL9A3-201ENST00000343916 HES5Q5TA89 166 aa17.58■□□□□ 0.4
COL9A3-201ENST00000343916 PRSS45Q7RTY3 260 aa17.58■□□□□ 0.4
COL9A3-201ENST00000343916 SLC35F3Q8IY50 421 aa17.58■□□□□ 0.4
COL9A3-201ENST00000343916 TCTE3Q8IZS6 198 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms