RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 DOCK6Q96HP0 2047 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 LCTP09848 1927 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 NPC1O15118 1278 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 PRAMEF2O60811 474 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 OLFM2O95897 454 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 EPXP11678 715 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 LBX1P52954 281 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 ACTBP60709 375 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 ACTG1P63261 375 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 MC2RQ01718 297 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 MEP1BQ16820 701 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 TMEM184AQ6ZMB5 413 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 MCATQ8IVS2 390 aaKnown RBP11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 TMEM151BQ8IW70 566 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 ZBTB44Q8NCP5 570 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 OR10K1Q8NGX5 313 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 SDHCQ99643 169 aaPredicted RBP11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 CACNA1EQ15878 2313 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 PARP14Q460N5 1801 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 NAP1L6A6NFF2 107 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 ZNF726A6NNF4 738 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 ZNF593O00488 134 aaPredicted RBP11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 PER3P56645 1201 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 SLC18B1Q6NT16 456 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 RHOUQ7L0Q8 258 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 ZNF283Q8N7M2 679 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 ZC3H10Q96K80 434 aaKnown RBP11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 PITHD1Q9GZP4 211 aaPredicted RBP11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 ENKD1Q9H0I2 346 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 HRASLSQ9HDD0 168 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 ZNF337Q9Y3M9 751 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 A0A0A6YYD5 115 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 HNRNPA2B1P22626 353 aaKnown RBP11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 S100A11P31949 105 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 POU3F4P49335 361 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 SGCAQ16586 387 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 GLYR1Q49A26 553 aaPredicted RBP11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 LRRC69Q6ZNQ3 347 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 LINC00346Q8IVM7 164 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 PLPP6Q8IY26 295 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 OR6N1Q8NGY5 312 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 STOML3Q8TAV4 291 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 DCUN1D4Q92564 292 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 C3orf49Q96BT1 292 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 MARVELD1Q9BSK0 173 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 ACKR4Q9NPB9 350 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 WASH6PQ9NQA3 447 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 PCYT1BQ9Y5K3 369 aaPredicted RBP11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 UNC13CQ8NB66 2214 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 WDR81Q562E7 1941 aa11.43□□□□□ -0.58
SNRNP48-201ENST00000342415 ERVH48-1M5A8F1 160 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 UBL4AP11441 157 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 TACR3P29371 465 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 MELKQ14680 651 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 Q499Y3 187 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 AADACL4Q5VUY2 407 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 COX15Q7KZN9 410 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 OR6V1Q8N148 313 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 TEX19Q8NA77 164 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 STEAP2Q8NFT2 490 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 MED18Q9BUE0 208 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 SDHAF2Q9NX18 166 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 KCND3Q9UK17 655 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 DPTQ07507 201 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 ALKBH2Q6NS38 261 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 CD300LFQ8TDQ1 290 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 ST8SIA2Q92186 375 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 ZBTB8AQ96BR9 441 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 SIRT4Q9Y6E7 314 aaPredicted RBP11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 MGAMO43451 1857 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 CENPVL1A0A0U1RR11 272 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 SLC33A1O00400 549 aaPredicted RBP11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 RGS13O14921 159 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 FADS1O60427 444 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 GUCA2AQ02747 115 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 CBFBQ13951 182 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 RBMS2Q15434 407 aaKnown RBP11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 TMEM201Q5SNT2 666 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 GLYATL3Q5SZD4 288 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 PM20D2Q8IYS1 436 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 MORN4Q8NDC4 146 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 ST6GALNAC5Q9BVH7 336 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 PDE7BQ9NP56 450 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 GPRIN2O60269 458 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 ADRA2AP08913 450 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 LUMP51884 338 aaPredicted RBP11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 ZNF616Q08AN1 781 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 TDGQ13569 410 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 LINC00303Q3SY05 128 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 MED25Q71SY5 747 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 SLC38A6Q8IZM9 456 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 OR5M1Q8NGP8 315 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 WDR77Q9BQA1 342 aaPredicted RBP11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 C7orf50Q9BRJ6 194 aaKnown RBP11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 SMIM3Q9BZL3 60 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 ZNF700Q9H0M5 742 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 HRH4Q9H3N8 390 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 PCDHB16Q9NRJ7 776 aa11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 DHCR7Q9UBM7 475 aaKnown RBP11.42□□□□□ -0.58
SNRNP48-201ENST00000342415 TMEM82A0PJX8 343 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms