RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 NTN1O95631 604 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 ATP1B1P05026 303 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 ANXA2P07355 339 aaKnown RBP5.11□□□□□ -1.59
CSDE1-202ENST00000339438 SLC2A1P11166 492 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 CSRP1P21291 193 aaKnown RBP5.11□□□□□ -1.59
CSDE1-202ENST00000339438 DPP4P27487 766 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 PCP4P48539 62 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 TAS2R38P59533 333 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 SLC35D3Q5M8T2 416 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 NCMAPQ5T1S8 102 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 FAM111BQ6SJ93 734 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 SYT12Q8IV01 421 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 OR10J5Q8NHC4 309 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 STOML3Q8TAV4 291 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 LRIG1Q96JA1 1093 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 CMTM3Q96MX0 182 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 OCSTAMPQ9BR26 566 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 TSPAN10Q9H1Z9 355 aaPredicted RBP5.11□□□□□ -1.59
CSDE1-202ENST00000339438 SEC61A2Q9H9S3 476 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 IL21RQ9HBE5 538 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 ZNF282Q9UDV7 671 aaPredicted RBP5.11□□□□□ -1.59
CSDE1-202ENST00000339438 LSM7Q9UK45 103 aaKnown RBP5.11□□□□□ -1.59
CSDE1-202ENST00000339438 PLEKHA6Q9Y2H5 1048 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 PRKAB1Q9Y478 270 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 MAP4K5Q9Y4K4 846 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 FBN2P35556 2912 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 TRAV1-2A0A0B4J238 106 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 IRGMA1A4Y4 181 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 CPED1A4D0V7 1026 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 URADA6NGE7 173 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 MARCH11A6NNE9 402 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 C1orf196B1AJZ1 125 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 SULT2B1O00204 365 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 OR10H3O60404 316 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 STK16O75716 305 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 SLC25A4P12235 298 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 PTHLHP12272 177 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 DDTP30046 118 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 CCR7P32248 378 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 KRT33BQ14525 404 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 LBHQ53QV2 105 aaPredicted RBP5.11□□□□□ -1.59
CSDE1-202ENST00000339438 DCST1Q5T197 706 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 RPL13AP3Q6NVV1 102 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 TMEM92Q6UXU6 159 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 ZNF783Q6ZMS7 281 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 TMPRSS11FQ6ZWK6 438 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 TMEM25Q86YD3 366 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 GJD3Q8N144 294 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 PNLDC1Q8NA58 520 aaKnown RBP5.11□□□□□ -1.59
CSDE1-202ENST00000339438 ABHD4Q8TB40 342 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 CA5BP1Q8WTZ4 195 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 ASB13Q8WXK3 278 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 CHST6Q9GZX3 395 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 SMOC1Q9H4F8 434 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 SUV39H2Q9H5I1 410 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 TMEM231Q9H6L2 316 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 BPIFA1Q9NP55 256 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 CYTL1Q9NRR1 136 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 SVEP1Q4LDE5 3571 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 A0A0D9SG52 128 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 E7EQ34 232 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 MKRN2OSH3BPM6 223 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 GOSR2O14653 212 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 TOX3O15405 576 aaPredicted RBP5.11□□□□□ -1.59
CSDE1-202ENST00000339438 PRAMEF11O60813 436 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 CTSLP07711 333 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 SP9P0CG40 484 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 ADRB3P13945 408 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 CD53P19397 219 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 MPIP34949 423 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 WASP42768 502 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 CACNG1Q06432 222 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 MAPK14Q16539 360 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 ZNF630Q2M218 657 aaPredicted RBP5.11□□□□□ -1.59
CSDE1-202ENST00000339438 ADGRF1Q5T601 910 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 LIPJQ5W064 366 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 FRG2Q64ET8 278 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 IKBIPQ70UQ0 350 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 GLT6D1Q7Z4J2 308 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 C17orf82Q86X59 251 aaPredicted RBP5.11□□□□□ -1.59
CSDE1-202ENST00000339438 CARFQ8N187 725 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 DNAAF1Q8NEP3 725 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 OR13C5Q8NGS8 318 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 ASZ1Q8WWH4 475 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 FRG2BQ96QU4 278 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 SLC35A5Q9BS91 424 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 NRSN2Q9GZP1 204 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 POLR1EQ9GZS1 481 aaKnown RBP5.11□□□□□ -1.59
CSDE1-202ENST00000339438 TOLLIPQ9H0E2 274 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 REEP4Q9H6H4 257 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 ABRACLQ9P1F3 81 aa5.11□□□□□ -1.59
CSDE1-202ENST00000339438 LEFTY2O00292 366 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 SYT5O00445 386 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 KLF4O43474 513 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 TRBC1P01850 177 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 MT-ND4LP03901 98 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 H1F0P07305 194 aaKnown RBP5.1□□□□□ -1.59
CSDE1-202ENST00000339438 RHOQP17081 205 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 HTR1FP30939 366 aa5.1□□□□□ -1.59
CSDE1-202ENST00000339438 MNDAP41218 407 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms