RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 GRINAQ7Z429 371 aa13.06□□□□□ -0.32
TSPO-201ENST00000329563 STK32CQ86UX6 486 aa13.06□□□□□ -0.32
TSPO-201ENST00000329563 SVOPLQ8N434 492 aa13.06□□□□□ -0.32
TSPO-201ENST00000329563 ATP6V1C2Q8NEY4 427 aa13.06□□□□□ -0.32
TSPO-201ENST00000329563 SLC38A4Q969I6 547 aa13.06□□□□□ -0.32
TSPO-201ENST00000329563 MRGPRX4Q96LA9 322 aa13.06□□□□□ -0.32
TSPO-201ENST00000329563 PKP2Q99959 881 aa13.06□□□□□ -0.32
TSPO-201ENST00000329563 ADAM19Q9H013 955 aa13.06□□□□□ -0.32
TSPO-201ENST00000329563 C12orf49Q9H741 205 aa13.06□□□□□ -0.32
TSPO-201ENST00000329563 SERINC1Q9NRX5 453 aa13.06□□□□□ -0.32
TSPO-201ENST00000329563 GLRX2Q9NS18 164 aa13.06□□□□□ -0.32
TSPO-201ENST00000329563 SAMHD1Q9Y3Z3 626 aaKnown RBP13.06□□□□□ -0.32
TSPO-201ENST00000329563 ZANQ9Y493 2812 aa13.06□□□□□ -0.32
TSPO-201ENST00000329563 IGHV3-15A0A0B4J1V0 119 aa13.05□□□□□ -0.32
TSPO-201ENST00000329563 A0A1W2PNR3 127 aa13.05□□□□□ -0.32
TSPO-201ENST00000329563 J3KTA2 159 aa13.05□□□□□ -0.32
TSPO-201ENST00000329563 KLF4O43474 513 aa13.05□□□□□ -0.32
TSPO-201ENST00000329563 TMCC2O75069 709 aa13.05□□□□□ -0.32
TSPO-201ENST00000329563 DIRAS1O95057 198 aa13.05□□□□□ -0.32
TSPO-201ENST00000329563 SYNGR4O95473 234 aa13.05□□□□□ -0.32
TSPO-201ENST00000329563 EDNRAP25101 427 aa13.05□□□□□ -0.32
TSPO-201ENST00000329563 RBM34P42696 430 aaKnown RBP13.05□□□□□ -0.32
TSPO-201ENST00000329563 POLR2HP52434 150 aaKnown RBP13.05□□□□□ -0.32
TSPO-201ENST00000329563 NR1H2P55055 460 aa13.05□□□□□ -0.32
TSPO-201ENST00000329563 CDH12P55289 794 aa13.05□□□□□ -0.32
TSPO-201ENST00000329563 SESN3P58005 492 aa13.05□□□□□ -0.32
TSPO-201ENST00000329563 BEX5Q5H9J7 111 aa13.05□□□□□ -0.32
TSPO-201ENST00000329563 PDSS1Q5T2R2 415 aa13.05□□□□□ -0.32
TSPO-201ENST00000329563 GTF2IRD2BQ6EKJ0 949 aa13.05□□□□□ -0.32
TSPO-201ENST00000329563 AMIGO2Q86SJ2 522 aa13.05□□□□□ -0.32
TSPO-201ENST00000329563 GTF2IRD2Q86UP8 949 aa13.05□□□□□ -0.32
TSPO-201ENST00000329563 HIPK1Q86Z02 1210 aa13.05□□□□□ -0.32
TSPO-201ENST00000329563 ZDHHC13Q8IUH4 622 aa13.05□□□□□ -0.32
TSPO-201ENST00000329563 TUSC5Q8IXB3 177 aa13.05□□□□□ -0.32
TSPO-201ENST00000329563 RNF113BQ8IZP6 322 aaKnown RBP13.05□□□□□ -0.32
TSPO-201ENST00000329563 COX4I2Q96KJ9 171 aa13.05□□□□□ -0.32
TSPO-201ENST00000329563 PRR14Q9BWN1 585 aa13.05□□□□□ -0.32
TSPO-201ENST00000329563 KRCC1Q9NPI7 259 aaPredicted RBP13.05□□□□□ -0.32
TSPO-201ENST00000329563 C8orf4Q9NR00 106 aa13.05□□□□□ -0.32
TSPO-201ENST00000329563 SLC7A7Q9UM01 511 aa13.05□□□□□ -0.32
TSPO-201ENST00000329563 LYVE1Q9Y5Y7 322 aa13.05□□□□□ -0.32
TSPO-201ENST00000329563 USF3Q68DE3 2245 aa13.04□□□□□ -0.32
TSPO-201ENST00000329563 A0A087WUJ7 227 aa13.04□□□□□ -0.32
TSPO-201ENST00000329563 ELOA3DA6NLF2 546 aaPredicted RBP13.04□□□□□ -0.32
TSPO-201ENST00000329563 CXCR1P25024 350 aa13.04□□□□□ -0.32
TSPO-201ENST00000329563 TACR3P29371 465 aa13.04□□□□□ -0.32
TSPO-201ENST00000329563 IFNGR2P38484 337 aa13.04□□□□□ -0.32
TSPO-201ENST00000329563 TSC22D1Q15714 1073 aa13.04□□□□□ -0.32
TSPO-201ENST00000329563 ELOA3BQ3SY89 546 aa13.04□□□□□ -0.32
TSPO-201ENST00000329563 FGD3Q5JSP0 725 aa13.04□□□□□ -0.32
TSPO-201ENST00000329563 SHQ1Q6PI26 577 aaKnown RBP13.04□□□□□ -0.32
TSPO-201ENST00000329563 C5orf46Q6UWT4 87 aa13.04□□□□□ -0.32
TSPO-201ENST00000329563 ELOA3Q8NG57 546 aa13.04□□□□□ -0.32
TSPO-201ENST00000329563 OR5K1Q8NHB7 308 aa13.04□□□□□ -0.32
TSPO-201ENST00000329563 RNF217Q8TC41 542 aa13.04□□□□□ -0.32
TSPO-201ENST00000329563 ACOT11Q8WXI4 607 aaPredicted RBP13.04□□□□□ -0.32
TSPO-201ENST00000329563 CPNE4Q96A23 557 aaPredicted RBP13.04□□□□□ -0.32
TSPO-201ENST00000329563 C3orf49Q96BT1 292 aa13.04□□□□□ -0.32
TSPO-201ENST00000329563 SMR3AQ99954 134 aa13.04□□□□□ -0.32
TSPO-201ENST00000329563 C9orf16Q9BUW7 83 aa13.04□□□□□ -0.32
TSPO-201ENST00000329563 SLC19A3Q9BZV2 496 aa13.04□□□□□ -0.32
TSPO-201ENST00000329563 NTN4Q9HB63 628 aa13.04□□□□□ -0.32
TSPO-201ENST00000329563 CTPS2Q9NRF8 586 aa13.04□□□□□ -0.32
TSPO-201ENST00000329563 KLHL13Q9P2N7 655 aa13.04□□□□□ -0.32
TSPO-201ENST00000329563 RHCGQ9UBD6 479 aa13.04□□□□□ -0.32
TSPO-201ENST00000329563 SPIN1Q9Y657 262 aaPredicted RBP13.04□□□□□ -0.32
TSPO-201ENST00000329563 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.03□□□□□ -0.32
TSPO-201ENST00000329563 ARRDC5A6NEK1 342 aa13.03□□□□□ -0.32
TSPO-201ENST00000329563 G3V2T6 193 aa13.03□□□□□ -0.32
TSPO-201ENST00000329563 CASQ2O14958 399 aaPredicted RBP13.03□□□□□ -0.32
TSPO-201ENST00000329563 SMAD9O15198 467 aaKnown RBP13.03□□□□□ -0.32
TSPO-201ENST00000329563 CCNB2O95067 398 aa13.03□□□□□ -0.32
TSPO-201ENST00000329563 PLAUP00749 431 aa13.03□□□□□ -0.32
TSPO-201ENST00000329563 ZNF23P17027 643 aa13.03□□□□□ -0.32
TSPO-201ENST00000329563 LIMS1P48059 325 aa13.03□□□□□ -0.32
TSPO-201ENST00000329563 MERTKQ12866 999 aa13.03□□□□□ -0.32
TSPO-201ENST00000329563 SELENBP1Q13228 472 aa13.03□□□□□ -0.32
TSPO-201ENST00000329563 HMBOX1Q6NT76 420 aa13.03□□□□□ -0.32
TSPO-201ENST00000329563 TTC33Q6PID6 262 aaPredicted RBP13.03□□□□□ -0.32
TSPO-201ENST00000329563 TFAP2EQ6VUC0 442 aa13.03□□□□□ -0.32
TSPO-201ENST00000329563 LINC00114Q6XXX2 140 aa13.03□□□□□ -0.32
TSPO-201ENST00000329563 BEND4Q6ZU67 534 aa13.03□□□□□ -0.32
TSPO-201ENST00000329563 Q71RC1 249 aaPredicted RBP13.03□□□□□ -0.32
TSPO-201ENST00000329563 FCRLAQ7L513 359 aa13.03□□□□□ -0.32
TSPO-201ENST00000329563 ATG4DQ86TL0 474 aaPredicted RBP13.03□□□□□ -0.32
TSPO-201ENST00000329563 CDK20Q8IZL9 346 aa13.03□□□□□ -0.32
TSPO-201ENST00000329563 GABRG1Q8N1C3 465 aa13.03□□□□□ -0.32
TSPO-201ENST00000329563 OR52J3Q8NH60 311 aa13.03□□□□□ -0.32
TSPO-201ENST00000329563 EME1Q96AY2 570 aa13.03□□□□□ -0.32
TSPO-201ENST00000329563 PERPQ96FX8 193 aa13.03□□□□□ -0.32
TSPO-201ENST00000329563 Q96MF0 132 aa13.03□□□□□ -0.32
TSPO-201ENST00000329563 PSD2Q9BQI7 771 aa13.03□□□□□ -0.32
TSPO-201ENST00000329563 TMEM43Q9BTV4 400 aa13.03□□□□□ -0.32
TSPO-201ENST00000329563 GSX2Q9BZM3 304 aa13.03□□□□□ -0.32
TSPO-201ENST00000329563 OR10A4Q9H209 315 aa13.03□□□□□ -0.32
TSPO-201ENST00000329563 SEMA6AQ9H2E6 1030 aa13.03□□□□□ -0.32
TSPO-201ENST00000329563 VCX3BQ9H321 246 aa13.03□□□□□ -0.32
TSPO-201ENST00000329563 CXorf56Q9H5V9 222 aa13.03□□□□□ -0.32
TSPO-201ENST00000329563 GJE1A6NN92 205 aa13.02□□□□□ -0.33
TSPO-201ENST00000329563 ZNF814B7Z6K7 855 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms