RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 ADAM18Q9Y3Q7 739 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 DNAJC13O75165 2243 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 TLN1Q9Y490 2541 aaKnown RBP9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 PIEZO2Q9H5I5 2752 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 LOC102725191A0A1B0GVB3 256 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 RIIAD1A6NNX1 92 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 ZNF814B7Z6K7 855 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 IFNGP01579 166 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 CPN1P15169 458 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 DSPP15924 2871 aaKnown RBP9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 KLK2P20151 261 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 ENPP1P22413 925 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 AHCYP23526 432 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 SDHAP31040 664 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 EIF1AXP47813 144 aaKnown RBP9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 MLLT10P55197 1068 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 CDK5R2Q13319 367 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 EMC4Q5J8M3 183 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 TMEM201Q5SNT2 666 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 FAM180AQ6UWF9 173 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 PXKQ7Z7A4 578 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 CCDC103Q8IW40 242 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 Q8NA96 180 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 CNIH3Q8TBE1 160 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 CPNE4Q96A23 557 aaPredicted RBP9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 PAQR5Q9NXK6 330 aaPredicted RBP9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 LUZP4Q9P127 313 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 B3GAT1Q9P2W7 334 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 NOX1Q9Y5S8 564 aa9.17□□□□□ -0.94
VIPAS39-201ENST00000327028 A0A1W2PRG6 482 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 NPIPA5E9PKD4 350 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 SMAD9O15198 467 aaKnown RBP9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 WBP4O75554 376 aaKnown RBP9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 VAMP5O95183 116 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 NOS3P29474 1203 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 CHN2P52757 468 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 HSF1Q00613 529 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 TOP3AQ13472 1001 aaPredicted RBP9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 SLC25A30Q5SVS4 291 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 ABLIM2Q6H8Q1 611 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 LAIR2Q6ISS4 152 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 FAM26EQ8N5C1 309 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 EXD3Q8N9H8 876 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 WDYHV1Q96HA8 205 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 OXGR1Q96P68 337 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 IL4I1Q96RQ9 567 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 TIMP4Q99727 224 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 TXNIPQ9H3M7 391 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 FN3KQ9H479 309 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 GRHPRQ9UBQ7 328 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 NPIPA1Q9UND3 350 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 TEX13CA0A0J9YWL9 993 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 RAMP1O60894 148 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 SLC2A10O95528 541 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 ZNF3P17036 446 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 DAP3P51398 398 aaKnown RBP9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 RPL27P61353 136 aaKnown RBP9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 POU3F1Q03052 451 aaPredicted RBP9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 SRYQ05066 204 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 KRR1Q13601 381 aaKnown RBP9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 POU4F3Q15319 338 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 ACKR1Q16570 336 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 OCLNQ16625 522 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 C6orf141Q5SZD1 244 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 SLC35F1Q5T1Q4 408 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 FAM205BPQ63HN1 556 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 UEVLDQ8IX04 471 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 ZNF786Q8N393 782 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 ZNF519Q8TB69 540 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 HDAC2Q92769 488 aaKnown RBP9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 RASD2Q96D21 266 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 Q96M85 177 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 UCN2Q96RP3 112 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 PRDM14Q9GZV8 571 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 CLN6Q9NWW5 311 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 AASSQ9UDR5 926 aa9.16□□□□□ -0.94
VIPAS39-201ENST00000327028 ITPR1Q14643 2758 aa9.15□□□□□ -0.94
VIPAS39-201ENST00000327028 IGHV3-15A0A0B4J1V0 119 aa9.15□□□□□ -0.94
VIPAS39-201ENST00000327028 TLX2O43763 284 aaPredicted RBP9.15□□□□□ -0.94
VIPAS39-201ENST00000327028 SERPINI2O75830 405 aa9.15□□□□□ -0.94
VIPAS39-201ENST00000327028 PLGP00747 810 aaPredicted RBP9.15□□□□□ -0.94
VIPAS39-201ENST00000327028 SFTPCP11686 197 aa9.15□□□□□ -0.94
VIPAS39-201ENST00000327028 HLA-DOBP13765 273 aa9.15□□□□□ -0.94
VIPAS39-201ENST00000327028 HIST1H1CP16403 213 aaKnown RBP9.15□□□□□ -0.94
VIPAS39-201ENST00000327028 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.15□□□□□ -0.94
VIPAS39-201ENST00000327028 TMEM225Q6GV28 225 aa9.15□□□□□ -0.94
VIPAS39-201ENST00000327028 NHLRC1Q6VVB1 395 aa9.15□□□□□ -0.94
VIPAS39-201ENST00000327028 ADCK1Q86TW2 530 aa9.15□□□□□ -0.94
VIPAS39-201ENST00000327028 KDM8Q8N371 416 aa9.15□□□□□ -0.94
VIPAS39-201ENST00000327028 ARIH2OSQ8N7S6 290 aa9.15□□□□□ -0.94
VIPAS39-201ENST00000327028 ZNF566Q969W8 418 aa9.15□□□□□ -0.94
VIPAS39-201ENST00000327028 ZNF845Q96IR2 970 aaPredicted RBP9.15□□□□□ -0.94
VIPAS39-201ENST00000327028 Q96MT0 163 aa9.15□□□□□ -0.94
VIPAS39-201ENST00000327028 GPR137Q96N19 417 aa9.15□□□□□ -0.94
VIPAS39-201ENST00000327028 YTHDF1Q9BYJ9 559 aaKnown RBP9.15□□□□□ -0.94
VIPAS39-201ENST00000327028 ZNF346Q9UL40 294 aaKnown RBP9.15□□□□□ -0.94
VIPAS39-201ENST00000327028 GPR52Q9Y2T5 361 aa9.15□□□□□ -0.94
VIPAS39-201ENST00000327028 MAP1BP46821 2468 aaKnown RBP9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 TPRP12270 2363 aaKnown RBP9.15□□□□□ -0.95
VIPAS39-201ENST00000327028 ZZEF1O43149 2961 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms