RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 CD200R1LQ6Q8B3 271 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 B3GLCTQ6Y288 498 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 ADPRHL1Q8NDY3 354 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 DEFB124Q8NES8 71 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 ADAMTS17Q8TE56 1095 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 SPRYD4Q8WW59 207 aaPredicted RBP16.1■□□□□ 0.17
RAB39A-201ENST00000320578 CENPOQ9BU64 300 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 SSR3Q9UNL2 185 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 LOC100506127A0A0U1RQW1 187 aa16.09■□□□□ 0.17
RAB39A-201ENST00000320578 CDK2AP1O14519 115 aa16.09■□□□□ 0.17
RAB39A-201ENST00000320578 RENP00797 406 aa16.09■□□□□ 0.17
RAB39A-201ENST00000320578 MT-ND5P03915 603 aa16.09■□□□□ 0.17
RAB39A-201ENST00000320578 INHBBP09529 407 aa16.09■□□□□ 0.17
RAB39A-201ENST00000320578 TAS2R43P59537 309 aa16.09■□□□□ 0.17
RAB39A-201ENST00000320578 MESTQ5EB52 335 aa16.09■□□□□ 0.17
RAB39A-201ENST00000320578 SLC6A19Q695T7 634 aa16.09■□□□□ 0.17
RAB39A-201ENST00000320578 C3orf33Q6P1S2 294 aa16.09■□□□□ 0.17
RAB39A-201ENST00000320578 H1FNTQ75WM6 255 aaPredicted RBP16.09■□□□□ 0.17
RAB39A-201ENST00000320578 GTPBP8Q8N3Z3 284 aaPredicted RBP16.09■□□□□ 0.17
RAB39A-201ENST00000320578 OR10H4Q8NGA5 316 aa16.09■□□□□ 0.17
RAB39A-201ENST00000320578 OR2T4Q8NH00 348 aa16.09■□□□□ 0.17
RAB39A-201ENST00000320578 ZNF519Q8TB69 540 aa16.09■□□□□ 0.17
RAB39A-201ENST00000320578 MRPL48Q96GC5 212 aaKnown RBP16.09■□□□□ 0.17
RAB39A-201ENST00000320578 NPAS1Q99742 590 aa16.09■□□□□ 0.17
RAB39A-201ENST00000320578 SLIRPQ9GZT3 109 aaKnown RBP16.09■□□□□ 0.17
RAB39A-201ENST00000320578 SACM1LQ9NTJ5 587 aa16.09■□□□□ 0.17
RAB39A-201ENST00000320578 ALKBH4Q9NXW9 302 aa16.09■□□□□ 0.17
RAB39A-201ENST00000320578 FBXL2Q9UKC9 423 aa16.09■□□□□ 0.17
RAB39A-201ENST00000320578 B3GALT5Q9Y2C3 310 aa16.09■□□□□ 0.17
RAB39A-201ENST00000320578 SDK2Q58EX2 2172 aa16.09■□□□□ 0.17
RAB39A-201ENST00000320578 WDR87Q6ZQQ6 2873 aa16.08■□□□□ 0.17
RAB39A-201ENST00000320578 LOC101059948A0A1B0GTJ6 334 aa16.08■□□□□ 0.17
RAB39A-201ENST00000320578 LIPT2A6NK58 231 aa16.08■□□□□ 0.17
RAB39A-201ENST00000320578 RNF13O43567 381 aa16.08■□□□□ 0.17
RAB39A-201ENST00000320578 EFNA2O43921 213 aa16.08■□□□□ 0.17
RAB39A-201ENST00000320578 GYPBP06028 91 aa16.08■□□□□ 0.17
RAB39A-201ENST00000320578 CCL3P10147 92 aa16.08■□□□□ 0.17
RAB39A-201ENST00000320578 CSRP1P21291 193 aaKnown RBP16.08■□□□□ 0.17
RAB39A-201ENST00000320578 DSCR4P56555 118 aaPredicted RBP16.08■□□□□ 0.17
RAB39A-201ENST00000320578 ZNF85Q03923 595 aa16.08■□□□□ 0.17
RAB39A-201ENST00000320578 SELENBP1Q13228 472 aa16.08■□□□□ 0.17
RAB39A-201ENST00000320578 GLYR1Q49A26 553 aaPredicted RBP16.08■□□□□ 0.17
RAB39A-201ENST00000320578 ACER2Q5QJU3 275 aa16.08■□□□□ 0.17
RAB39A-201ENST00000320578 SYS1Q8N2H4 156 aa16.08■□□□□ 0.17
RAB39A-201ENST00000320578 ZNF248Q8NDW4 579 aa16.08■□□□□ 0.17
RAB39A-201ENST00000320578 ZNF417Q8TAU3 575 aa16.08■□□□□ 0.17
RAB39A-201ENST00000320578 ZNF587Q96SQ5 575 aaPredicted RBP16.08■□□□□ 0.17
RAB39A-201ENST00000320578 MNTQ99583 582 aa16.08■□□□□ 0.17
RAB39A-201ENST00000320578 NXF2Q9GZY0 626 aaKnown RBP16.08■□□□□ 0.17
RAB39A-201ENST00000320578 SLC30A4O14863 429 aa16.08■□□□□ 0.16
RAB39A-201ENST00000320578 LIFP15018 202 aa16.08■□□□□ 0.16
RAB39A-201ENST00000320578 FGF9P31371 208 aaPredicted RBP16.08■□□□□ 0.16
RAB39A-201ENST00000320578 CD79BP40259 229 aa16.08■□□□□ 0.16
RAB39A-201ENST00000320578 ACTA2P62736 377 aa16.08■□□□□ 0.16
RAB39A-201ENST00000320578 ACTG2P63267 376 aa16.08■□□□□ 0.16
RAB39A-201ENST00000320578 ZNF239Q16600 458 aaKnown RBP16.08■□□□□ 0.16
RAB39A-201ENST00000320578 FAM205BPQ63HN1 556 aa16.08■□□□□ 0.16
RAB39A-201ENST00000320578 IGF2-ASQ6U949 168 aa16.08■□□□□ 0.16
RAB39A-201ENST00000320578 ZPLD1Q8TCW7 415 aa16.08■□□□□ 0.16
RAB39A-201ENST00000320578 PSMF1Q92530 271 aa16.08■□□□□ 0.16
RAB39A-201ENST00000320578 NXPE2Q96DL1 559 aa16.08■□□□□ 0.16
RAB39A-201ENST00000320578 ZMYND19Q96E35 227 aaPredicted RBP16.08■□□□□ 0.16
RAB39A-201ENST00000320578 ARL5BQ96KC2 179 aa16.08■□□□□ 0.16
RAB39A-201ENST00000320578 ALG12Q9BV10 488 aa16.08■□□□□ 0.16
RAB39A-201ENST00000320578 MMP27Q9H306 513 aa16.08■□□□□ 0.16
RAB39A-201ENST00000320578 TRIM36Q9NQ86 728 aa16.08■□□□□ 0.16
RAB39A-201ENST00000320578 VSX1Q9NZR4 365 aaPredicted RBP16.08■□□□□ 0.16
RAB39A-201ENST00000320578 HDGFL3Q9Y3E1 203 aa16.08■□□□□ 0.16
RAB39A-201ENST00000320578 WDFY4Q6ZS81 3184 aa16.07■□□□□ 0.16
RAB39A-201ENST00000320578 PCNX3Q9H6A9 2034 aa16.07■□□□□ 0.16
RAB39A-201ENST00000320578 TRDV1A0A1B0GX56 115 aa16.07■□□□□ 0.16
RAB39A-201ENST00000320578 ZNF670-ZNF695F2Z2N8 137 aa16.07■□□□□ 0.16
RAB39A-201ENST00000320578 XKRYO14609 159 aa16.07■□□□□ 0.16
RAB39A-201ENST00000320578 CBR3O75828 277 aa16.07■□□□□ 0.16
RAB39A-201ENST00000320578 IMPDH2P12268 514 aa16.07■□□□□ 0.16
RAB39A-201ENST00000320578 GTF2E2P29084 291 aaKnown RBP16.07■□□□□ 0.16
RAB39A-201ENST00000320578 BLVRAP53004 296 aa16.07■□□□□ 0.16
RAB39A-201ENST00000320578 PUDPQ08623 228 aa16.07■□□□□ 0.16
RAB39A-201ENST00000320578 ACKR1Q16570 336 aa16.07■□□□□ 0.16
RAB39A-201ENST00000320578 PRAMEF20Q5VT98 475 aa16.07■□□□□ 0.16
RAB39A-201ENST00000320578 EEF1A1P5Q5VTE0 462 aa16.07■□□□□ 0.16
RAB39A-201ENST00000320578 TIGD3Q6B0B8 471 aa16.07■□□□□ 0.16
RAB39A-201ENST00000320578 SLC35F2Q8IXU6 374 aa16.07■□□□□ 0.16
RAB39A-201ENST00000320578 CHST11Q9NPF2 352 aa16.07■□□□□ 0.16
RAB39A-201ENST00000320578 RPRD1BQ9NQG5 326 aaKnown RBP16.07■□□□□ 0.16
RAB39A-201ENST00000320578 TRAPPC4Q9Y296 219 aa16.07■□□□□ 0.16
RAB39A-201ENST00000320578 FKBP7Q9Y680 259 aa16.07■□□□□ 0.16
RAB39A-201ENST00000320578 PMF1-BGLAPU3KQ54 211 aa16.07■□□□□ 0.16
RAB39A-201ENST00000320578 MPDZO75970 2070 aa16.07■□□□□ 0.16
RAB39A-201ENST00000320578 A0A1W2PNV4 684 aa16.06■□□□□ 0.16
RAB39A-201ENST00000320578 A0A1W2PQL4 384 aaPredicted RBP16.06■□□□□ 0.16
RAB39A-201ENST00000320578 A0A1W2PRG6 482 aa16.06■□□□□ 0.16
RAB39A-201ENST00000320578 A6NIZ1 184 aa16.06■□□□□ 0.16
RAB39A-201ENST00000320578 MS4A18H0YCH9 400 aa16.06■□□□□ 0.16
RAB39A-201ENST00000320578 LALBAP00709 142 aa16.06■□□□□ 0.16
RAB39A-201ENST00000320578 TFP02787 698 aa16.06■□□□□ 0.16
RAB39A-201ENST00000320578 ZNF17P17021 662 aa16.06■□□□□ 0.16
RAB39A-201ENST00000320578 RAP1BP61224 184 aa16.06■□□□□ 0.16
RAB39A-201ENST00000320578 RPS3AP61247 264 aaKnown RBP16.06■□□□□ 0.16
RAB39A-201ENST00000320578 RAP1AP62834 184 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms