RNA–Protein interactions for RNA: ENST00000317243.9

ZNF554-201, Transcript of zinc finger protein 554, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF554, Length 2,736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-201ENST00000317243 TRAV27A0A087WT01 109 aa17.77■□□□□ 0.43
ZNF554-201ENST00000317243 OR2M5A3KFT3 312 aa17.77■□□□□ 0.43
ZNF554-201ENST00000317243 SEMA4FO95754 770 aa17.77■□□□□ 0.43
ZNF554-201ENST00000317243 MAT1AQ00266 395 aaKnown RBP17.77■□□□□ 0.43
ZNF554-201ENST00000317243 ILF3Q12906 894 aaKnown RBP eCLIP17.77■□□□□ 0.43
ZNF554-201ENST00000317243 DUSP8Q13202 625 aa17.77■□□□□ 0.43
ZNF554-201ENST00000317243 DCST2Q5T1A1 773 aa17.77■□□□□ 0.43
ZNF554-201ENST00000317243 B3GNTL1Q67FW5 361 aaPredicted RBP17.77■□□□□ 0.43
ZNF554-201ENST00000317243 GLDNQ6ZMI3 551 aaPredicted RBP17.77■□□□□ 0.43
ZNF554-201ENST00000317243 SSX6Q7RTT6 188 aa17.77■□□□□ 0.43
ZNF554-201ENST00000317243 TAF8Q7Z7C8 310 aa17.77■□□□□ 0.43
ZNF554-201ENST00000317243 AVL9Q8NBF6 648 aa17.77■□□□□ 0.43
ZNF554-201ENST00000317243 FAM71CQ8NEG0 241 aa17.77■□□□□ 0.43
ZNF554-201ENST00000317243 ZNF671Q8TAW3 534 aa17.77■□□□□ 0.43
ZNF554-201ENST00000317243 ORAI1Q96D31 301 aa17.77■□□□□ 0.43
ZNF554-201ENST00000317243 CCDC86Q9H6F5 360 aaKnown RBP17.77■□□□□ 0.43
ZNF554-201ENST00000317243 IL21RQ9HBE5 538 aa17.77■□□□□ 0.43
ZNF554-201ENST00000317243 CALML5Q9NZT1 146 aa17.77■□□□□ 0.43
ZNF554-201ENST00000317243 KLK11Q9UBX7 282 aa17.77■□□□□ 0.43
ZNF554-201ENST00000317243 MLXQ9UH92 298 aa17.77■□□□□ 0.43
ZNF554-201ENST00000317243 CYB5R1Q9UHQ9 305 aa17.77■□□□□ 0.43
ZNF554-201ENST00000317243 DTX4Q9Y2E6 619 aa17.77■□□□□ 0.43
ZNF554-201ENST00000317243 CYR61O00622 381 aa17.76■□□□□ 0.43
ZNF554-201ENST00000317243 OR5F1O95221 314 aa17.76■□□□□ 0.43
ZNF554-201ENST00000317243 APBB3O95704 486 aa17.76■□□□□ 0.43
ZNF554-201ENST00000317243 PPP3CBP16298 524 aa17.76■□□□□ 0.43
ZNF554-201ENST00000317243 GABRA3P34903 492 aa17.76■□□□□ 0.43
ZNF554-201ENST00000317243 TSFMP43897 325 aaKnown RBP17.76■□□□□ 0.43
ZNF554-201ENST00000317243 EEF1A1P68104 462 aaKnown RBP17.76■□□□□ 0.43
ZNF554-201ENST00000317243 TP53I3Q53FA7 332 aa17.76■□□□□ 0.43
ZNF554-201ENST00000317243 ZNF613Q6PF04 617 aa17.76■□□□□ 0.43
ZNF554-201ENST00000317243 SPICQ8N5J4 248 aa17.76■□□□□ 0.43
ZNF554-201ENST00000317243 FAM98AQ8NCA5 519 aaKnown RBP17.76■□□□□ 0.43
ZNF554-201ENST00000317243 PTCHD1Q96NR3 888 aa17.76■□□□□ 0.43
ZNF554-201ENST00000317243 CACYBPQ9HB71 228 aaKnown RBP17.76■□□□□ 0.43
ZNF554-201ENST00000317243 HEATR5AQ86XA9 2040 aa17.76■□□□□ 0.43
ZNF554-201ENST00000317243 B4DGG1 531 aa17.76■□□□□ 0.43
ZNF554-201ENST00000317243 C2CD4DB7Z1M9 353 aa17.76■□□□□ 0.43
ZNF554-201ENST00000317243 F8W036 122 aa17.76■□□□□ 0.43
ZNF554-201ENST00000317243 TGFBR3LH3BV60 316 aa17.76■□□□□ 0.43
ZNF554-201ENST00000317243 H7C2Y5 167 aa17.76■□□□□ 0.43
ZNF554-201ENST00000317243 BHLHE40O14503 412 aa17.76■□□□□ 0.43
ZNF554-201ENST00000317243 IL9P15248 144 aa17.76■□□□□ 0.43
ZNF554-201ENST00000317243 NDUFS1P28331 727 aa17.76■□□□□ 0.43
ZNF554-201ENST00000317243 CALCRP30988 508 aa17.76■□□□□ 0.43
ZNF554-201ENST00000317243 FOXK2Q01167 660 aa17.76■□□□□ 0.43
ZNF554-201ENST00000317243 ZNF660Q6AZW8 331 aaPredicted RBP17.76■□□□□ 0.43
ZNF554-201ENST00000317243 ARL14Q8N4G2 192 aa17.76■□□□□ 0.43
ZNF554-201ENST00000317243 OR51L1Q8NGJ5 315 aa17.76■□□□□ 0.43
ZNF554-201ENST00000317243 OR5M9Q8NGP3 310 aa17.76■□□□□ 0.43
ZNF554-201ENST00000317243 OR52I2Q8NH67 350 aa17.76■□□□□ 0.43
ZNF554-201ENST00000317243 RERGQ96A58 199 aaPredicted RBP17.76■□□□□ 0.43
ZNF554-201ENST00000317243 SLC22A18Q96BI1 424 aa17.76■□□□□ 0.43
ZNF554-201ENST00000317243 NARS2Q96I59 477 aaKnown RBP17.76■□□□□ 0.43
ZNF554-201ENST00000317243 PGLYRP3Q96LB9 341 aa17.76■□□□□ 0.43
ZNF554-201ENST00000317243 HS6ST2Q96MM7 605 aa17.76■□□□□ 0.43
ZNF554-201ENST00000317243 JAM3Q9BX67 310 aa17.76■□□□□ 0.43
ZNF554-201ENST00000317243 TPSD1Q9BZJ3 242 aa17.76■□□□□ 0.43
ZNF554-201ENST00000317243 USP36Q9P275 1121 aaKnown RBP17.76■□□□□ 0.43
ZNF554-201ENST00000317243 FREM2Q5SZK8 3169 aa17.75■□□□□ 0.43
ZNF554-201ENST00000317243 FAM86C2PA6NEL3 165 aa17.75■□□□□ 0.43
ZNF554-201ENST00000317243 TNFSF14O43557 240 aa17.75■□□□□ 0.43
ZNF554-201ENST00000317243 RLN2P04090 185 aa17.75■□□□□ 0.43
ZNF554-201ENST00000317243 EPXP11678 715 aa17.75■□□□□ 0.43
ZNF554-201ENST00000317243 PTHLHP12272 177 aa17.75■□□□□ 0.43
ZNF554-201ENST00000317243 HOXB1P14653 301 aaPredicted RBP17.75■□□□□ 0.43
ZNF554-201ENST00000317243 IFNGR1P15260 489 aa17.75■□□□□ 0.43
ZNF554-201ENST00000317243 NDUFAF6Q330K2 333 aa17.75■□□□□ 0.43
ZNF554-201ENST00000317243 ARHGAP11BQ3KRB8 267 aa17.75■□□□□ 0.43
ZNF554-201ENST00000317243 PRAMEF8Q5VWM4 474 aa17.75■□□□□ 0.43
ZNF554-201ENST00000317243 PRAMEF7Q5VXH5 474 aa17.75■□□□□ 0.43
ZNF554-201ENST00000317243 TMEM88Q6PEY1 159 aa17.75■□□□□ 0.43
ZNF554-201ENST00000317243 USP53Q70EK8 1073 aa17.75■□□□□ 0.43
ZNF554-201ENST00000317243 SERPINA12Q8IW75 414 aa17.75■□□□□ 0.43
ZNF554-201ENST00000317243 CSNK1A1LQ8N752 337 aa17.75■□□□□ 0.43
ZNF554-201ENST00000317243 COX18Q8N8Q8 333 aa17.75■□□□□ 0.43
ZNF554-201ENST00000317243 BAHD1Q8TBE0 780 aaPredicted RBP17.75■□□□□ 0.43
ZNF554-201ENST00000317243 SMPDL3BQ92485 455 aa17.75■□□□□ 0.43
ZNF554-201ENST00000317243 PEX11GQ96HA9 241 aa17.75■□□□□ 0.43
ZNF554-201ENST00000317243 GPR174Q9BXC1 333 aa17.75■□□□□ 0.43
ZNF554-201ENST00000317243 NKX6-2Q9C056 277 aaPredicted RBP17.75■□□□□ 0.43
ZNF554-201ENST00000317243 MTHFD2LQ9H903 347 aaPredicted RBP17.75■□□□□ 0.43
ZNF554-201ENST00000317243 KRCC1Q9NPI7 259 aaPredicted RBP17.75■□□□□ 0.43
ZNF554-201ENST00000317243 PURGQ9UJV8 347 aaKnown RBP17.75■□□□□ 0.43
ZNF554-201ENST00000317243 ERVK-19Q9WJR5 959 aa17.75■□□□□ 0.43
ZNF554-201ENST00000317243 PCDHGA5Q9Y5G8 931 aa17.75■□□□□ 0.43
ZNF554-201ENST00000317243 PRSS44E7EML9 344 aa17.75■□□□□ 0.43
ZNF554-201ENST00000317243 CREBL2O60519 120 aaPredicted RBP17.75■□□□□ 0.43
ZNF554-201ENST00000317243 HPP00738 406 aa17.75■□□□□ 0.43
ZNF554-201ENST00000317243 HIST1H2ABP04908 130 aa17.75■□□□□ 0.43
ZNF554-201ENST00000317243 SBK2P0C263 348 aa17.75■□□□□ 0.43
ZNF554-201ENST00000317243 MC2RQ01718 297 aa17.75■□□□□ 0.43
ZNF554-201ENST00000317243 ZNF85Q03923 595 aa17.75■□□□□ 0.43
ZNF554-201ENST00000317243 CRMP1Q14194 572 aa17.75■□□□□ 0.43
ZNF554-201ENST00000317243 HIST3H2AQ7L7L0 130 aa17.75■□□□□ 0.43
ZNF554-201ENST00000317243 LURAP1LQ8IV03 231 aa17.75■□□□□ 0.43
ZNF554-201ENST00000317243 MCATQ8IVS2 390 aaKnown RBP17.75■□□□□ 0.43
ZNF554-201ENST00000317243 SLC44A3Q8N4M1 653 aa17.75■□□□□ 0.43
ZNF554-201ENST00000317243 EIF4E3Q8N5X7 224 aaKnown RBP17.75■□□□□ 0.43
ZNF554-201ENST00000317243 OR5M1Q8NGP8 315 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms