RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 ZNF33BQ06732 778 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 OR7E24Q6IFN5 339 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 RAB12Q6IQ22 244 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 ERVMER34-1Q9H9K5 563 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 GSKIPQ9P0R6 139 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 LRIT1Q9P2V4 623 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 SCP2D1Q9UJQ7 156 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 ICKQ9UPZ9 632 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 ASB4Q9Y574 426 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 PIAS3Q9Y6X2 628 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 F5H0A9 414 aaPredicted RBP13.37□□□□□ -0.27
PTPN9-201ENST00000306726 UBL3O95164 117 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 FARS2O95363 451 aaKnown RBP13.37□□□□□ -0.27
PTPN9-201ENST00000306726 F12P00748 615 aaPredicted RBP13.37□□□□□ -0.27
PTPN9-201ENST00000306726 AMY2AP04746 511 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 HIST1H2ABP04908 130 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 LPLP06858 475 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 UBL4AP11441 157 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 CAMK2DQ13557 499 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 EIF2B1Q14232 305 aaKnown RBP13.37□□□□□ -0.27
PTPN9-201ENST00000306726 ARHGAP40Q5TG30 622 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 TRILQ7L0X0 811 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 HIST3H2AQ7L7L0 130 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 TAF8Q7Z7C8 310 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 OR52N1Q8NH53 320 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 APOBEC4Q8WW27 367 aaKnown RBP13.37□□□□□ -0.27
PTPN9-201ENST00000306726 HIST1H2ACQ93077 130 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 MS4A4EQ96PG1 132 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 NT5DC2Q9H857 520 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 ASF1BQ9NVP2 202 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 MED11Q9P086 117 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 WNT16Q9UBV4 365 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 A0A0A6YYD5 115 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 A0A1W2PPV9 198 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 CT62P0C5K7 136 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 OR7A5Q15622 319 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 PRAMEF17Q5VTA0 474 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 SGTBQ96EQ0 304 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 TREM1Q9NP99 234 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 THAP10Q9P2Z0 257 aaPredicted RBP13.37□□□□□ -0.27
PTPN9-201ENST00000306726 V9GY05 133 aa13.37□□□□□ -0.27
PTPN9-201ENST00000306726 ART1P52961 327 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 PSMD4P55036 377 aaKnown RBP13.36□□□□□ -0.27
PTPN9-201ENST00000306726 GMFBP60983 142 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 ZP2Q05996 745 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 KLHL26Q53HC5 615 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 TMEM81Q6P7N7 255 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 GLB1L2Q8IW92 636 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 GPALPP1Q8IXQ4 340 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 ACBD4Q8NC06 268 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 SLC6A15Q9H2J7 730 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 MEPEQ9NQ76 525 aaPredicted RBP13.36□□□□□ -0.27
PTPN9-201ENST00000306726 ZNF230Q9UIE0 474 aaPredicted RBP13.36□□□□□ -0.27
PTPN9-201ENST00000306726 SLC22A13Q9Y226 551 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 MPDZO75970 2070 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 SLC33A1O00400 549 aaPredicted RBP13.36□□□□□ -0.27
PTPN9-201ENST00000306726 TPOP07202 933 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 GLI4P10075 376 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 PI3P19957 117 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 AKR1C3P42330 323 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 ZNF85Q03923 595 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 SCRN3Q0VDG4 424 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 LRRC56Q8IYG6 542 aaPredicted RBP13.36□□□□□ -0.27
PTPN9-201ENST00000306726 ARIH2OSQ8N7S6 290 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 TMEM52Q8NDY8 209 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 ARPC5LQ9BPX5 153 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.36□□□□□ -0.27
PTPN9-201ENST00000306726 GHITMQ9H3K2 345 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 PRR13Q9NZ81 148 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 ELF5Q9UKW6 265 aaPredicted RBP13.36□□□□□ -0.27
PTPN9-201ENST00000306726 PPIL1Q9Y3C6 166 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 OR2AT4A6NND4 320 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 DPM1O60762 260 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 CTSVO60911 334 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 LILRB5O75023 590 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 APBB3O95704 486 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 ATP1B1P05026 303 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 RD3LP0DJH9 198 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 MAP3K8P41279 467 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 TNK1Q13470 666 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 DECR1Q16698 335 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 MEP1BQ16820 701 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 FIGLAQ6QHK4 219 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 GJD3Q8N144 294 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 OR51Q1Q8NH59 317 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 NPRL2Q8WTW4 380 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 SLC17A9Q9BYT1 436 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 SYT4Q9H2B2 425 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 POLR1DQ9Y2S0 133 aa13.36□□□□□ -0.27
PTPN9-201ENST00000306726 ITGA10O75578 1167 aa13.35□□□□□ -0.27
PTPN9-201ENST00000306726 ZFPL1O95159 310 aa13.35□□□□□ -0.27
PTPN9-201ENST00000306726 ADAM8P78325 824 aa13.35□□□□□ -0.27
PTPN9-201ENST00000306726 CBFBQ13951 182 aa13.35□□□□□ -0.27
PTPN9-201ENST00000306726 ELOAQ14241 798 aaKnown RBP13.35□□□□□ -0.27
PTPN9-201ENST00000306726 EIPR1Q53HC9 387 aa13.35□□□□□ -0.27
PTPN9-201ENST00000306726 LIPNQ5VXI9 398 aa13.35□□□□□ -0.27
PTPN9-201ENST00000306726 BEST3Q8N1M1 668 aa13.35□□□□□ -0.27
PTPN9-201ENST00000306726 LSMEM1Q8N8F7 131 aa13.35□□□□□ -0.27
PTPN9-201ENST00000306726 BRIX1Q8TDN6 353 aaKnown RBP13.35□□□□□ -0.27
PTPN9-201ENST00000306726 PELI2Q9HAT8 420 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms