RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 MCCC2Q9HCC0 563 aa13.55□□□□□ -0.24
CCDC140-201ENST00000295226 KRT84Q9NSB2 600 aa13.55□□□□□ -0.24
CCDC140-201ENST00000295226 TAS2R5Q9NYW4 299 aa13.55□□□□□ -0.24
CCDC140-201ENST00000295226 KLHL13Q9P2N7 655 aa13.55□□□□□ -0.24
CCDC140-201ENST00000295226 REV1Q9UBZ9 1251 aa13.55□□□□□ -0.24
CCDC140-201ENST00000295226 ZNF229Q9UJW7 825 aa13.55□□□□□ -0.24
CCDC140-201ENST00000295226 TPRKBQ9Y3C4 175 aa13.55□□□□□ -0.24
CCDC140-201ENST00000295226 NOL3O60936 208 aaKnown RBP13.54□□□□□ -0.24
CCDC140-201ENST00000295226 PTP4A3O75365 173 aa13.54□□□□□ -0.24
CCDC140-201ENST00000295226 ADAP00813 363 aa13.54□□□□□ -0.24
CCDC140-201ENST00000295226 MT-ATP6P00846 226 aa13.54□□□□□ -0.24
CCDC140-201ENST00000295226 IGF2P01344 180 aa13.54□□□□□ -0.24
CCDC140-201ENST00000295226 TP53P04637 393 aaPredicted RBP13.54□□□□□ -0.24
CCDC140-201ENST00000295226 GTF2E2P29084 291 aaKnown RBP13.54□□□□□ -0.24
CCDC140-201ENST00000295226 EPHA2P29317 976 aa13.54□□□□□ -0.24
CCDC140-201ENST00000295226 NUP107P57740 925 aa13.54□□□□□ -0.24
CCDC140-201ENST00000295226 CSNK2A1P68400 391 aaPredicted RBP13.54□□□□□ -0.24
CCDC140-201ENST00000295226 CD47Q08722 323 aa13.54□□□□□ -0.24
CCDC140-201ENST00000295226 PON3Q15166 354 aa13.54□□□□□ -0.24
CCDC140-201ENST00000295226 THSD4Q6ZMP0 1018 aa13.54□□□□□ -0.24
CCDC140-201ENST00000295226 Q6ZPB1 254 aaPredicted RBP13.54□□□□□ -0.24
CCDC140-201ENST00000295226 CHMP1BQ7LBR1 199 aa13.54□□□□□ -0.24
CCDC140-201ENST00000295226 OR5J2Q8NH18 312 aa13.54□□□□□ -0.24
CCDC140-201ENST00000295226 FNDC9Q8TBE3 224 aa13.54□□□□□ -0.24
CCDC140-201ENST00000295226 SAMD8Q96LT4 415 aa13.54□□□□□ -0.24
CCDC140-201ENST00000295226 ASPNQ9BXN1 380 aa13.54□□□□□ -0.24
CCDC140-201ENST00000295226 PLA2G12AQ9BZM1 189 aa13.54□□□□□ -0.24
CCDC140-201ENST00000295226 SIGLEC7Q9Y286 467 aa13.54□□□□□ -0.24
CCDC140-201ENST00000295226 SNX5Q9Y5X3 404 aa13.54□□□□□ -0.24
CCDC140-201ENST00000295226 CFAP46Q8IYW2 2715 aa13.54□□□□□ -0.24
CCDC140-201ENST00000295226 OR14I1A6ND48 311 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 CLCA1A8K7I4 914 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 MS4A18H0YCH9 400 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 PLPP3O14495 311 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 SMAD9O15198 467 aaKnown RBP13.53□□□□□ -0.24
CCDC140-201ENST00000295226 SERPINI2O75830 405 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 AQP8O94778 261 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 TGM6O95932 706 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 F13BP05160 661 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 ADORA3P0DMS8 318 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 HLA-DOBP13765 273 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 ABOP16442 354 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 AHCYP23526 432 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 DCKP27707 260 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 POU1F1P28069 291 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 P2RY4P51582 365 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 RPS3AP61247 264 aaKnown RBP13.53□□□□□ -0.24
CCDC140-201ENST00000295226 RPL18Q07020 188 aaKnown RBP13.53□□□□□ -0.24
CCDC140-201ENST00000295226 MS4A18Q3C1V0 323 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 PDSS1Q5T2R2 415 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 H1FNTQ75WM6 255 aaPredicted RBP13.53□□□□□ -0.24
CCDC140-201ENST00000295226 NANOGNBQ7Z5D8 188 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 CD163Q86VB7 1156 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 CLVS1Q8IUQ0 354 aaPredicted RBP13.53□□□□□ -0.24
CCDC140-201ENST00000295226 OR8D4Q8NGM9 314 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 OR6S1Q8NH40 331 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 LIPHQ8WWY8 451 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 TMIGD2Q96BF3 282 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 ZNF775Q96BV0 537 aaPredicted RBP13.53□□□□□ -0.24
CCDC140-201ENST00000295226 TRIB1Q96RU8 372 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 PITX2Q99697 317 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 GABARAPL3Q9BY60 117 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 RIBC2Q9H4K1 309 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 CCNB1IP1Q9NPC3 277 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 CHST11Q9NPF2 352 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 SCN3BQ9NY72 215 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 MRPL39Q9NYK5 338 aaKnown RBP13.53□□□□□ -0.24
CCDC140-201ENST00000295226 NDRG4Q9ULP0 352 aaKnown RBP13.53□□□□□ -0.24
CCDC140-201ENST00000295226 GMPPBQ9Y5P6 360 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 EDN3P14138 238 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 AGFG1P52594 562 aaKnown RBP13.53□□□□□ -0.24
CCDC140-201ENST00000295226 H3F3AP84243 136 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 IL5RAQ01344 420 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 ZNF239Q16600 458 aaKnown RBP13.53□□□□□ -0.24
CCDC140-201ENST00000295226 CLEC12AQ5QGZ9 265 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 TMEM236Q5W0B7 351 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 PAQR6Q6TCH4 344 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 GPAT4Q86UL3 456 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 RPRMLQ8N4K4 120 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 FAM57AQ8TBR7 257 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 FANK1Q8TC84 345 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 DOK1Q99704 481 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 TIGARQ9NQ88 270 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 SH3BGRL2Q9UJC5 107 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 POFUT2Q9Y2G5 429 aa13.53□□□□□ -0.24
CCDC140-201ENST00000295226 AQP7P3A6NL99 342 aa13.52□□□□□ -0.25
CCDC140-201ENST00000295226 H3BN98 237 aa13.52□□□□□ -0.25
CCDC140-201ENST00000295226 SLC1A7O00341 560 aa13.52□□□□□ -0.25
CCDC140-201ENST00000295226 OR6A2O95222 327 aa13.52□□□□□ -0.25
CCDC140-201ENST00000295226 PLGP00747 810 aaPredicted RBP13.52□□□□□ -0.25
CCDC140-201ENST00000295226 UQCRC1P31930 480 aa13.52□□□□□ -0.25
CCDC140-201ENST00000295226 SLC9A3P48764 834 aa13.52□□□□□ -0.25
CCDC140-201ENST00000295226 TMBIM6P55061 237 aa13.52□□□□□ -0.25
CCDC140-201ENST00000295226 CDK5R2Q13319 367 aa13.52□□□□□ -0.25
CCDC140-201ENST00000295226 RAB39AQ14964 217 aa13.52□□□□□ -0.25
CCDC140-201ENST00000295226 MFSD13AQ14CX5 517 aa13.52□□□□□ -0.25
CCDC140-201ENST00000295226 TMEM225Q6GV28 225 aa13.52□□□□□ -0.25
CCDC140-201ENST00000295226 CD300LDQ6UXZ3 194 aa13.52□□□□□ -0.25
CCDC140-201ENST00000295226 RPTNQ6XPR3 784 aa13.52□□□□□ -0.25
CCDC140-201ENST00000295226 ZNF620Q6ZNG0 422 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms