RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 CLSTN3Q9BQT9 956 aa11.29□□□□□ -0.6
SRRM4-201ENST00000267260 IFT22Q9H7X7 185 aa11.29□□□□□ -0.6
SRRM4-201ENST00000267260 OR14J1Q9UGF5 321 aa11.29□□□□□ -0.6
SRRM4-201ENST00000267260 KDM3BQ7LBC6 1761 aa11.29□□□□□ -0.6
SRRM4-201ENST00000267260 C4orf47A7E2U8 309 aa11.29□□□□□ -0.6
SRRM4-201ENST00000267260 SLC43A1O75387 559 aa11.29□□□□□ -0.6
SRRM4-201ENST00000267260 PMS2P2O95744 297 aa11.29□□□□□ -0.6
SRRM4-201ENST00000267260 HNRNPA1P09651 372 aaKnown RBP eCLIP11.29□□□□□ -0.6
SRRM4-201ENST00000267260 FCRLBQ6BAA4 426 aa11.29□□□□□ -0.6
SRRM4-201ENST00000267260 TXNRD3NBQ6F5E7 133 aa11.29□□□□□ -0.6
SRRM4-201ENST00000267260 WDR88Q6ZMY6 472 aa11.29□□□□□ -0.6
SRRM4-201ENST00000267260 RABEPKQ7Z6M1 372 aa11.29□□□□□ -0.6
SRRM4-201ENST00000267260 ST8SIA2Q92186 375 aa11.29□□□□□ -0.6
SRRM4-201ENST00000267260 SDR39U1Q9NRG7 319 aaPredicted RBP11.29□□□□□ -0.6
SRRM4-201ENST00000267260 TRAPPC2LQ9UL33 140 aa11.29□□□□□ -0.6
SRRM4-201ENST00000267260 SPTBN1Q01082 2364 aaKnown RBP11.29□□□□□ -0.6
SRRM4-201ENST00000267260 CORO6Q6QEF8 472 aa11.29□□□□□ -0.6
SRRM4-201ENST00000267260 APH1AQ96BI3 265 aa11.29□□□□□ -0.6
SRRM4-201ENST00000267260 ZNF300Q96RE9 604 aaPredicted RBP11.29□□□□□ -0.6
SRRM4-201ENST00000267260 OLAHQ9NV23 265 aa11.29□□□□□ -0.6
SRRM4-201ENST00000267260 ADAM29Q9UKF5 820 aa11.29□□□□□ -0.6
SRRM4-201ENST00000267260 KCTD3Q9Y597 815 aa11.29□□□□□ -0.6
SRRM4-201ENST00000267260 KIF26BQ2KJY2 2108 aa11.29□□□□□ -0.6
SRRM4-201ENST00000267260 TJP1Q07157 1748 aa11.29□□□□□ -0.6
SRRM4-201ENST00000267260 SOWAHBA6NEL2 793 aa11.29□□□□□ -0.6
SRRM4-201ENST00000267260 CRYM-AS1A6NIL9 109 aa11.29□□□□□ -0.6
SRRM4-201ENST00000267260 F7P08709 466 aaPredicted RBP11.29□□□□□ -0.6
SRRM4-201ENST00000267260 TPPP2P59282 170 aa11.29□□□□□ -0.6
SRRM4-201ENST00000267260 LMAN2Q12907 356 aa11.29□□□□□ -0.6
SRRM4-201ENST00000267260 UMODL1-AS1Q8N2C9 162 aa11.29□□□□□ -0.6
SRRM4-201ENST00000267260 ACVR1CQ8NER5 493 aa11.29□□□□□ -0.6
SRRM4-201ENST00000267260 OR52B6Q8NGF0 335 aa11.29□□□□□ -0.6
SRRM4-201ENST00000267260 C1GALT1Q9NS00 363 aa11.29□□□□□ -0.6
SRRM4-201ENST00000267260 OSGIN1Q9UJX0 560 aa11.29□□□□□ -0.6
SRRM4-201ENST00000267260 RNF24Q9Y225 148 aa11.29□□□□□ -0.6
SRRM4-201ENST00000267260 POU3F2P20265 443 aaPredicted RBP11.28□□□□□ -0.6
SRRM4-201ENST00000267260 PIP5KL1Q5T9C9 394 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 LCTLQ6UWM7 567 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 TFAP2CQ92754 450 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 DMRT3Q9NQL9 472 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 MRC1P22897 1456 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 PDGFBP01127 241 aaPredicted RBP11.28□□□□□ -0.6
SRRM4-201ENST00000267260 KIR2DS3Q14952 304 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 ZFYVE21Q9BQ24 234 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 NDFIP1Q9BT67 221 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 FBXO45P0C2W1 286 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 MAOBP27338 520 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 LBHQ53QV2 105 aaPredicted RBP11.28□□□□□ -0.6
SRRM4-201ENST00000267260 PQLC3Q8N755 202 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 LIPHQ8WWY8 451 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 PIGCQ92535 297 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 BORCS6Q96GS4 357 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 SLC12A9Q9BXP2 914 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 OR51I2Q9H344 312 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 KCMF1Q9P0J7 381 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 A0A0J9YY10 115 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 OR2M5A3KFT3 312 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 C17orf105B2RV13 164 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 PLSCR1O15162 318 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 HNF1AP20823 631 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 Q6ZRG5 221 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 TMUB2Q71RG4 321 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 MISPQ8IVT2 679 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 TMEM217Q8N7C4 229 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 SLC6A18Q96N87 628 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 ATF6BQ99941 703 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 DUSP23Q9BVJ7 150 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 PCED1AQ9H1Q7 454 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 NECAP2Q9NVZ3 263 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 SH3BGRL2Q9UJC5 107 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 TRAV20A0A0B4J274 112 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 LRRC30A6NM36 301 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 H7BYZ3 331 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 SUSD5O60279 629 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 SCN4AP35499 1836 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 DCAF7P61962 342 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 EMC10Q5UCC4 262 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 TRNP1Q6NT89 227 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 ZNF551Q7Z340 670 aaPredicted RBP11.28□□□□□ -0.6
SRRM4-201ENST00000267260 ZNF561Q8N587 486 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 TCTN2Q96GX1 697 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 VSX1Q9NZR4 365 aaPredicted RBP11.28□□□□□ -0.6
SRRM4-201ENST00000267260 MOKQ9UQ07 419 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 KLK4Q9Y5K2 254 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 PTGDR2Q9Y5Y4 395 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 OPRD1P41143 372 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 GPLD1P80108 840 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 HBMQ6B0K9 141 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 PIWIL3Q7Z3Z3 882 aaKnown RBP11.28□□□□□ -0.6
SRRM4-201ENST00000267260 RNF175Q8N4F7 328 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 DEFB119Q8N690 84 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 SPATA6Q9NWH7 488 aaPredicted RBP11.28□□□□□ -0.6
SRRM4-201ENST00000267260 MRPL22Q9NWU5 206 aaKnown RBP11.28□□□□□ -0.6
SRRM4-201ENST00000267260 TAAR5O14804 337 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 ENSAO43768 121 aaKnown RBP11.28□□□□□ -0.6
SRRM4-201ENST00000267260 MMP7P09237 267 aaPredicted RBP11.28□□□□□ -0.6
SRRM4-201ENST00000267260 OR2T7P0C7T2 308 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 HMGCLP35914 325 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 MTCP1P56278 107 aa11.28□□□□□ -0.6
SRRM4-201ENST00000267260 NRARPQ7Z6K4 114 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms