RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 PAQR7Q86WK9 346 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 SGTBQ96EQ0 304 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 AMELYQ99218 206 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.88□□□□□ -0.51
SNX1-201ENST00000261889 WDR76Q9H967 626 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 TCF7L1Q9HCS4 588 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 NRIP3Q9NQ35 241 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 KLHL9Q9P2J3 617 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 LRIT1Q9P2V4 623 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 CAMK2AQ9UQM7 478 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 HRH3Q9Y5N1 445 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 MUC3AQ02505 3323 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 EML5Q05BV3 1969 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 TMEM272A0A1B0GTI8 110 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 A0A1W2PPC1 479 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 A0A1W2PQU0 124 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 CDC14CA4D256 554 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 RDH16O75452 317 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 LGALS3BPQ08380 585 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 PON3Q15166 354 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 PDGFRLQ15198 375 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 ENPP7Q6UWV6 458 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 PRR22Q8IZ63 422 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 BRIX1Q8TDN6 353 aaKnown RBP11.87□□□□□ -0.51
SNX1-201ENST00000261889 C2CD4CQ8TF44 421 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 ASB12Q8WXK4 309 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 EPHX3Q9H6B9 360 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 TMEM185BQ9H7F4 350 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 TMEM27Q9HBJ8 222 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 PLSCR5A0PG75 271 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 SC5DO75845 299 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 HLA-DQA2P01906 255 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 POU2F2P09086 479 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 TAS2R20P59543 309 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 FBXO42Q6P3S6 717 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 UNQ6126/PRO20091Q6UXV3 157 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 DPY19L4Q7Z388 723 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 ESX1Q8N693 406 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 OR4S1Q8NGB4 309 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 OR6N2Q8NGY6 317 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 ZNF524Q96C55 264 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 CPNE2Q96FN4 548 aaPredicted RBP11.87□□□□□ -0.51
SNX1-201ENST00000261889 COX14Q96I36 57 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 LINC00615Q96LM1 132 aaPredicted RBP11.87□□□□□ -0.51
SNX1-201ENST00000261889 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.87□□□□□ -0.51
SNX1-201ENST00000261889 KIAA1549LQ6ZVL6 1849 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 TEX51A0A1B0GUA7 166 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 CEACAM5P06731 702 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 NID1P14543 1247 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 PBX2P40425 430 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 OR7A5Q15622 319 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 ZIC1Q15915 447 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 FAM78AQ5JUQ0 283 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 PWWP2BQ6NUJ5 590 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 ZNF627Q7L945 461 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 CD163Q86VB7 1156 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 HOMEZQ8IX15 550 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 ZNF619Q8N2I2 560 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 RAB42Q8N4Z0 105 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 OR4C3Q8NH37 302 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 FGF13Q92913 245 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 HGDQ93099 445 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 SRMSQ9H3Y6 488 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 SLC22A13Q9Y226 551 aa11.87□□□□□ -0.51
SNX1-201ENST00000261889 EDDM13A0A1B0GTR0 161 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 MFSD2BA6NFX1 497 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 METTL12A8MUP2 240 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 OR10H2O60403 315 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 RP2O75695 350 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 SEC61A1P61619 476 aaKnown RBP11.86□□□□□ -0.51
SNX1-201ENST00000261889 PITPNAQ00169 270 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 ACSM1Q08AH1 577 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 SGCGQ13326 291 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 SLC22A6Q4U2R8 563 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 LIPNQ5VXI9 398 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 ADGRG3Q86Y34 549 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 TDHQ8IZJ6 230 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 KDM8Q8N371 416 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 TMEM106AQ96A25 262 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 SLC7A5P2Q9GIP4 190 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 RSPH9Q9H1X1 276 aaPredicted RBP11.86□□□□□ -0.51
SNX1-201ENST00000261889 ZCCHC4Q9H5U6 513 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 EXO5Q9H790 373 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 CGGBP1Q9UFW8 167 aaPredicted RBP11.86□□□□□ -0.51
SNX1-201ENST00000261889 FOXJ3Q9UPW0 622 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 V9GY05 133 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 A0A0A6YYC8 382 aaPredicted RBP11.86□□□□□ -0.51
SNX1-201ENST00000261889 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.86□□□□□ -0.51
SNX1-201ENST00000261889 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.86□□□□□ -0.51
SNX1-201ENST00000261889 FITM1A5D6W6 292 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 I3L1I5 382 aaPredicted RBP11.86□□□□□ -0.51
SNX1-201ENST00000261889 ARL6IP5O75915 188 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 LYPD3O95274 346 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 ANXA2P07355 339 aaKnown RBP11.86□□□□□ -0.51
SNX1-201ENST00000261889 ZNF28P17035 718 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 CTRB1P17538 263 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 SLC2A5P22732 501 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 DPP4P27487 766 aa11.86□□□□□ -0.51
SNX1-201ENST00000261889 CDKN2AP42771 156 aaKnown RBP11.86□□□□□ -0.51
SNX1-201ENST00000261889 PPP2CBP62714 309 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms