RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 MBD3L4A6NDZ8 208 aaPredicted RBP18.48■□□□□ 0.55
RTCA-201ENST00000260563 MBD3L3A6NE82 208 aaPredicted RBP18.48■□□□□ 0.55
RTCA-201ENST00000260563 MBD3L5A6NJ08 208 aaPredicted RBP18.48■□□□□ 0.55
RTCA-201ENST00000260563 ZAR1LA6NP61 321 aa18.48■□□□□ 0.55
RTCA-201ENST00000260563 LRRTM2O43300 516 aa18.48■□□□□ 0.55
RTCA-201ENST00000260563 DENRO43583 198 aaKnown RBP18.48■□□□□ 0.55
RTCA-201ENST00000260563 EIF1BO60739 113 aaKnown RBP18.48■□□□□ 0.55
RTCA-201ENST00000260563 CLIC3O95833 236 aa18.48■□□□□ 0.55
RTCA-201ENST00000260563 HIST1H2ABP04908 130 aa18.48■□□□□ 0.55
RTCA-201ENST00000260563 GRPRP30550 384 aa18.48■□□□□ 0.55
RTCA-201ENST00000260563 RPS4XP62701 263 aaKnown RBP18.48■□□□□ 0.55
RTCA-201ENST00000260563 MFSD13AQ14CX5 517 aa18.48■□□□□ 0.55
RTCA-201ENST00000260563 ANKDD1AQ495B1 522 aa18.48■□□□□ 0.55
RTCA-201ENST00000260563 TMEM211Q6ICI0 200 aa18.48■□□□□ 0.55
RTCA-201ENST00000260563 FCRLAQ7L513 359 aa18.48■□□□□ 0.55
RTCA-201ENST00000260563 HIST3H2AQ7L7L0 130 aa18.48■□□□□ 0.55
RTCA-201ENST00000260563 OR8D4Q8NGM9 314 aa18.48■□□□□ 0.55
RTCA-201ENST00000260563 MBD3L2Q8NHZ7 208 aaPredicted RBP18.48■□□□□ 0.55
RTCA-201ENST00000260563 HIST1H2ACQ93077 130 aa18.48■□□□□ 0.55
RTCA-201ENST00000260563 WNT2BQ93097 391 aa18.48■□□□□ 0.55
RTCA-201ENST00000260563 HRASLS5Q96KN8 279 aa18.48■□□□□ 0.55
RTCA-201ENST00000260563 DMRTA2Q96SC8 542 aa18.48■□□□□ 0.55
RTCA-201ENST00000260563 PITX2Q99697 317 aa18.48■□□□□ 0.55
RTCA-201ENST00000260563 TM9SF2Q99805 663 aa18.48■□□□□ 0.55
RTCA-201ENST00000260563 ANKRD60Q9BZ19 345 aa18.48■□□□□ 0.55
RTCA-201ENST00000260563 MCCC2Q9HCC0 563 aa18.48■□□□□ 0.55
RTCA-201ENST00000260563 TBC1D23Q9NUY8 699 aa18.48■□□□□ 0.55
RTCA-201ENST00000260563 NDRG4Q9ULP0 352 aaKnown RBP18.48■□□□□ 0.55
RTCA-201ENST00000260563 GMPPBQ9Y5P6 360 aa18.48■□□□□ 0.55
RTCA-201ENST00000260563 J3QKU1 62 aa18.47■□□□□ 0.55
RTCA-201ENST00000260563 SMAD9O15198 467 aaKnown RBP18.47■□□□□ 0.55
RTCA-201ENST00000260563 TGM6O95932 706 aa18.47■□□□□ 0.55
RTCA-201ENST00000260563 ACADSP16219 412 aa18.47■□□□□ 0.55
RTCA-201ENST00000260563 PAQR6Q6TCH4 344 aa18.47■□□□□ 0.55
RTCA-201ENST00000260563 USP51Q70EK9 711 aa18.47■□□□□ 0.55
RTCA-201ENST00000260563 NANOGNBQ7Z5D8 188 aa18.47■□□□□ 0.55
RTCA-201ENST00000260563 MARVELD2Q8N4S9 558 aa18.47■□□□□ 0.55
RTCA-201ENST00000260563 OR52L1Q8NGH7 329 aa18.47■□□□□ 0.55
RTCA-201ENST00000260563 OR5J2Q8NH18 312 aa18.47■□□□□ 0.55
RTCA-201ENST00000260563 ROBO4Q8WZ75 1007 aa18.47■□□□□ 0.55
RTCA-201ENST00000260563 SAMD8Q96LT4 415 aa18.47■□□□□ 0.55
RTCA-201ENST00000260563 NAA11Q9BSU3 229 aaPredicted RBP18.47■□□□□ 0.55
RTCA-201ENST00000260563 TSSK6Q9BXA6 273 aa18.47■□□□□ 0.55
RTCA-201ENST00000260563 ASPNQ9BXN1 380 aa18.47■□□□□ 0.55
RTCA-201ENST00000260563 HIF3AQ9Y2N7 669 aa18.47■□□□□ 0.55
RTCA-201ENST00000260563 CORINQ9Y5Q5 1042 aa18.47■□□□□ 0.55
RTCA-201ENST00000260563 NCOA6Q14686 2063 aaPredicted RBP18.47■□□□□ 0.55
RTCA-201ENST00000260563 BLOC1S5-TXNDC5H3BN57 136 aa18.46■□□□□ 0.55
RTCA-201ENST00000260563 NDUFB2O95178 105 aa18.46■□□□□ 0.55
RTCA-201ENST00000260563 GNAO1P09471 354 aa18.46■□□□□ 0.55
RTCA-201ENST00000260563 GLI4P10075 376 aa18.46■□□□□ 0.55
RTCA-201ENST00000260563 TIMP3P35625 211 aa18.46■□□□□ 0.55
RTCA-201ENST00000260563 PRPS1P60891 318 aa18.46■□□□□ 0.55
RTCA-201ENST00000260563 CDK5Q00535 292 aa18.46■□□□□ 0.55
RTCA-201ENST00000260563 PMPCAQ10713 525 aa18.46■□□□□ 0.55
RTCA-201ENST00000260563 IL18R1Q13478 541 aa18.46■□□□□ 0.55
RTCA-201ENST00000260563 CLEC12AQ5QGZ9 265 aa18.46■□□□□ 0.55
RTCA-201ENST00000260563 TMEM236Q5W0B7 351 aa18.46■□□□□ 0.55
RTCA-201ENST00000260563 SLC27A4Q6P1M0 643 aa18.46■□□□□ 0.55
RTCA-201ENST00000260563 SEM1Q6ZVN7 128 aa18.46■□□□□ 0.55
RTCA-201ENST00000260563 SLC43A2Q8N370 569 aa18.46■□□□□ 0.55
RTCA-201ENST00000260563 C9orf106Q8NAJ2 232 aa18.46■□□□□ 0.55
RTCA-201ENST00000260563 RNF128Q8TEB7 428 aa18.46■□□□□ 0.55
RTCA-201ENST00000260563 CNBD2Q96M20 576 aa18.46■□□□□ 0.55
RTCA-201ENST00000260563 MRPL39Q9NYK5 338 aaKnown RBP18.46■□□□□ 0.55
RTCA-201ENST00000260563 IL20RAQ9UHF4 553 aa18.46■□□□□ 0.55
RTCA-201ENST00000260563 M0R082 166 aa18.45■□□□□ 0.54
RTCA-201ENST00000260563 FZD7O75084 574 aa18.45■□□□□ 0.54
RTCA-201ENST00000260563 AQP8O94778 261 aa18.45■□□□□ 0.54
RTCA-201ENST00000260563 AKR7A3O95154 331 aa18.45■□□□□ 0.54
RTCA-201ENST00000260563 IL2RAP01589 272 aa18.45■□□□□ 0.54
RTCA-201ENST00000260563 TSPAN19P0C672 248 aa18.45■□□□□ 0.54
RTCA-201ENST00000260563 UQCRC1P31930 480 aa18.45■□□□□ 0.54
RTCA-201ENST00000260563 GGT2P36268 569 aa18.45■□□□□ 0.54
RTCA-201ENST00000260563 GIPRP48546 466 aa18.45■□□□□ 0.54
RTCA-201ENST00000260563 AGFG1P52594 562 aaKnown RBP18.45■□□□□ 0.54
RTCA-201ENST00000260563 SMSP52788 366 aa18.45■□□□□ 0.54
RTCA-201ENST00000260563 PER3P56645 1201 aa18.45■□□□□ 0.54
RTCA-201ENST00000260563 GINS1Q14691 196 aa18.45■□□□□ 0.54
RTCA-201ENST00000260563 ZNF691Q5VV52 312 aa18.45■□□□□ 0.54
RTCA-201ENST00000260563 SLX4IPQ5VYV7 408 aa18.45■□□□□ 0.54
RTCA-201ENST00000260563 OR2A2Q6IF42 318 aa18.45■□□□□ 0.54
RTCA-201ENST00000260563 MTFR2Q6P444 385 aa18.45■□□□□ 0.54
RTCA-201ENST00000260563 THSD4Q6ZMP0 1018 aa18.45■□□□□ 0.54
RTCA-201ENST00000260563 NCCRP1Q6ZVX7 275 aaPredicted RBP18.45■□□□□ 0.54
RTCA-201ENST00000260563 IQCF1Q8N6M8 205 aa18.45■□□□□ 0.54
RTCA-201ENST00000260563 SCAIQ8N9R8 606 aa18.45■□□□□ 0.54
RTCA-201ENST00000260563 ZNF417Q8TAU3 575 aa18.45■□□□□ 0.54
RTCA-201ENST00000260563 MUS81Q96NY9 551 aa18.45■□□□□ 0.54
RTCA-201ENST00000260563 ZNF587Q96SQ5 575 aaPredicted RBP18.45■□□□□ 0.54
RTCA-201ENST00000260563 RNF122Q9H9V4 155 aa18.45■□□□□ 0.54
RTCA-201ENST00000260563 SLC25A19Q9HC21 320 aa18.45■□□□□ 0.54
RTCA-201ENST00000260563 SEC14L4Q9UDX3 406 aa18.45■□□□□ 0.54
RTCA-201ENST00000260563 SLC5A6Q9Y289 635 aa18.45■□□□□ 0.54
RTCA-201ENST00000260563 INTS1Q8N201 2190 aaKnown RBP18.45■□□□□ 0.54
RTCA-201ENST00000260563 KLK2P20151 261 aa18.44■□□□□ 0.54
RTCA-201ENST00000260563 MYF6P23409 242 aa18.44■□□□□ 0.54
RTCA-201ENST00000260563 SLC6A6P31641 620 aa18.44■□□□□ 0.54
RTCA-201ENST00000260563 AQP2P41181 271 aa18.44■□□□□ 0.54
RTCA-201ENST00000260563 RPS6KA3P51812 740 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms