RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 DDIT4LQ96D03 193 aa14.98□□□□□ -0.01
SDCBP-201ENST00000260130 ARL5BQ96KC2 179 aa14.98□□□□□ -0.01
SDCBP-201ENST00000260130 ZNF559Q9BR84 538 aa14.98□□□□□ -0.01
SDCBP-201ENST00000260130 PRR14Q9BWN1 585 aa14.98□□□□□ -0.01
SDCBP-201ENST00000260130 TRIM2Q9C040 744 aa14.98□□□□□ -0.01
SDCBP-201ENST00000260130 OR11A1Q9GZK7 315 aa14.98□□□□□ -0.01
SDCBP-201ENST00000260130 WDR12Q9GZL7 423 aaKnown RBP14.98□□□□□ -0.01
SDCBP-201ENST00000260130 CCDC90BQ9GZT6 254 aa14.98□□□□□ -0.01
SDCBP-201ENST00000260130 HMG20AQ9NP66 347 aa14.98□□□□□ -0.01
SDCBP-201ENST00000260130 RPS6KB2Q9UBS0 482 aa14.98□□□□□ -0.01
SDCBP-201ENST00000260130 TESQ9UGI8 421 aaKnown RBP14.98□□□□□ -0.01
SDCBP-201ENST00000260130 HDGFL3Q9Y3E1 203 aa14.98□□□□□ -0.01
SDCBP-201ENST00000260130 IFNA14P01570 189 aa14.98□□□□□ -0.01
SDCBP-201ENST00000260130 KDELR2P33947 212 aa14.98□□□□□ -0.01
SDCBP-201ENST00000260130 DIO1P49895 249 aa14.98□□□□□ -0.01
SDCBP-201ENST00000260130 PSMD7P51665 324 aa14.98□□□□□ -0.01
SDCBP-201ENST00000260130 ITGADQ13349 1161 aa14.98□□□□□ -0.01
SDCBP-201ENST00000260130 ZNF239Q16600 458 aaKnown RBP14.98□□□□□ -0.01
SDCBP-201ENST00000260130 ANKRD34AQ69YU3 496 aa14.98□□□□□ -0.01
SDCBP-201ENST00000260130 SP5Q6BEB4 398 aaPredicted RBP14.98□□□□□ -0.01
SDCBP-201ENST00000260130 ZDHHC21Q8IVQ6 265 aa14.98□□□□□ -0.01
SDCBP-201ENST00000260130 ZBTB8BQ8NAP8 495 aaPredicted RBP14.98□□□□□ -0.01
SDCBP-201ENST00000260130 PIK3C3Q8NEB9 887 aa14.98□□□□□ -0.01
SDCBP-201ENST00000260130 S100ZQ8WXG8 99 aa14.98□□□□□ -0.01
SDCBP-201ENST00000260130 ROBO4Q8WZ75 1007 aa14.98□□□□□ -0.01
SDCBP-201ENST00000260130 ARHGDIGQ99819 225 aa14.98□□□□□ -0.01
SDCBP-201ENST00000260130 TPRKBQ9Y3C4 175 aa14.98□□□□□ -0.01
SDCBP-201ENST00000260130 ADGRG4Q8IZF6 3080 aa14.98□□□□□ -0.01
SDCBP-201ENST00000260130 A0A1W2PNV4 684 aa14.97□□□□□ -0.01
SDCBP-201ENST00000260130 BOLA2-SMG1P6H3BVE0 249 aa14.97□□□□□ -0.01
SDCBP-201ENST00000260130 SULT2B1O00204 365 aa14.97□□□□□ -0.01
SDCBP-201ENST00000260130 KPNA4O00629 521 aaPredicted RBP14.97□□□□□ -0.01
SDCBP-201ENST00000260130 SLC22A1O15245 554 aa14.97□□□□□ -0.01
SDCBP-201ENST00000260130 TNFSF13O75888 250 aa14.97□□□□□ -0.01
SDCBP-201ENST00000260130 HTR2AP28223 471 aa14.97□□□□□ -0.01
SDCBP-201ENST00000260130 GP2P55259 537 aaKnown RBP14.97□□□□□ -0.01
SDCBP-201ENST00000260130 CSNK2A1P68400 391 aaPredicted RBP14.97□□□□□ -0.01
SDCBP-201ENST00000260130 PIGFQ07326 219 aa14.97□□□□□ -0.01
SDCBP-201ENST00000260130 TFF3Q07654 80 aa14.97□□□□□ -0.01
SDCBP-201ENST00000260130 PPP1R8Q12972 351 aaKnown RBP14.97□□□□□ -0.01
SDCBP-201ENST00000260130 MYBPHQ13203 477 aa14.97□□□□□ -0.01
SDCBP-201ENST00000260130 AQP6Q13520 282 aa14.97□□□□□ -0.01
SDCBP-201ENST00000260130 ATG4DQ86TL0 474 aaPredicted RBP14.97□□□□□ -0.01
SDCBP-201ENST00000260130 ZBTB46Q86UZ6 589 aa14.97□□□□□ -0.01
SDCBP-201ENST00000260130 IGFN1Q86VF2 1251 aa14.97□□□□□ -0.01
SDCBP-201ENST00000260130 RORBQ92753 470 aa14.97□□□□□ -0.01
SDCBP-201ENST00000260130 U3KQV3 271 aa14.97□□□□□ -0.01
SDCBP-201ENST00000260130 M0R3H8 397 aa14.97□□□□□ -0.01
SDCBP-201ENST00000260130 TPST2O60704 377 aa14.97□□□□□ -0.01
SDCBP-201ENST00000260130 INMTO95050 263 aa14.97□□□□□ -0.01
SDCBP-201ENST00000260130 KEAP1Q14145 624 aa14.97□□□□□ -0.01
SDCBP-201ENST00000260130 CTF1Q16619 201 aa14.97□□□□□ -0.01
SDCBP-201ENST00000260130 RANBP3LQ86VV4 465 aaPredicted RBP14.97□□□□□ -0.01
SDCBP-201ENST00000260130 CNEP1R1Q8N9A8 125 aa14.97□□□□□ -0.01
SDCBP-201ENST00000260130 DNAJA4Q8WW22 397 aaPredicted RBP14.97□□□□□ -0.01
SDCBP-201ENST00000260130 TMEM27Q9HBJ8 222 aa14.97□□□□□ -0.01
SDCBP-201ENST00000260130 PAK1IP1Q9NWT1 392 aaPredicted RBP14.97□□□□□ -0.01
SDCBP-201ENST00000260130 SCN3BQ9NY72 215 aa14.97□□□□□ -0.01
SDCBP-201ENST00000260130 TRAPPC4Q9Y296 219 aa14.97□□□□□ -0.01
SDCBP-201ENST00000260130 A0A1B0GWA3 101 aa14.96□□□□□ -0.01
SDCBP-201ENST00000260130 ZC3H12DA2A288 527 aaKnown RBP14.96□□□□□ -0.01
SDCBP-201ENST00000260130 C19orf84I3L1E1 186 aa14.96□□□□□ -0.01
SDCBP-201ENST00000260130 GABARAPO95166 117 aa14.96□□□□□ -0.01
SDCBP-201ENST00000260130 PMS2P2O95744 297 aa14.96□□□□□ -0.01
SDCBP-201ENST00000260130 PLGP00747 810 aaPredicted RBP14.96□□□□□ -0.01
SDCBP-201ENST00000260130 ENPP1P22413 925 aa14.96□□□□□ -0.01
SDCBP-201ENST00000260130 OPRL1P41146 370 aa14.96□□□□□ -0.01
SDCBP-201ENST00000260130 KIR2DL2P43627 348 aaPredicted RBP14.96□□□□□ -0.01
SDCBP-201ENST00000260130 CXCR4P61073 352 aa14.96□□□□□ -0.01
SDCBP-201ENST00000260130 EMX1Q04741 257 aaPredicted RBP14.96□□□□□ -0.01
SDCBP-201ENST00000260130 HIST2H2BCQ6DN03 193 aa14.96□□□□□ -0.01
SDCBP-201ENST00000260130 FCRLAQ7L513 359 aa14.96□□□□□ -0.01
SDCBP-201ENST00000260130 RNF128Q8TEB7 428 aa14.96□□□□□ -0.01
SDCBP-201ENST00000260130 PROX1Q92786 737 aa14.96□□□□□ -0.01
SDCBP-201ENST00000260130 DNAJA3Q96EY1 480 aa14.96□□□□□ -0.01
SDCBP-201ENST00000260130 GMPPAQ96IJ6 420 aaPredicted RBP14.96□□□□□ -0.01
SDCBP-201ENST00000260130 C12orf10Q9HB07 376 aa14.96□□□□□ -0.01
SDCBP-201ENST00000260130 GLRX2Q9NS18 164 aa14.96□□□□□ -0.01
SDCBP-201ENST00000260130 DOCK7Q96N67 2140 aa14.96□□□□□ -0.02
SDCBP-201ENST00000260130 FMO6PO60774 539 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 CBX3Q13185 183 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 RNPS1Q15287 305 aaKnown RBP14.95□□□□□ -0.02
SDCBP-201ENST00000260130 GUSBP1Q15486 140 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 OR1Q1Q15612 314 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 OR2T5Q6IEZ7 315 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 ULK3Q6PHR2 472 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 FAM214BQ7L5A3 538 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 LSRQ86X29 649 aaPredicted RBP14.95□□□□□ -0.02
SDCBP-201ENST00000260130 MCEMP1Q8IX19 187 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 SLC43A2Q8N370 569 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 OR6T1Q8NGN1 323 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 OR2T29Q8NH02 315 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 VANGL1Q8TAA9 524 aaPredicted RBP14.95□□□□□ -0.02
SDCBP-201ENST00000260130 CNIH3Q8TBE1 160 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 STARD4Q96DR4 205 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 MCHR1Q99705 422 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 APOL4Q9BPW4 351 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 POTEKPQ9BYX7 375 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 PIGMQ9H3S5 423 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 IL1RAPQ9NPH3 570 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms