RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 NCK1P16333 377 aa21.42■■□□□ 1.02
SDF2L1-201ENST00000248958 ABCA4P78363 2273 aa21.42■■□□□ 1.02
SDF2L1-201ENST00000248958 SLC25A3Q00325 362 aa21.42■■□□□ 1.02
SDF2L1-201ENST00000248958 ZP4Q12836 540 aa21.42■■□□□ 1.02
SDF2L1-201ENST00000248958 FXNQ16595 210 aa21.42■■□□□ 1.02
SDF2L1-201ENST00000248958 HIST3H2AQ7L7L0 130 aa21.42■■□□□ 1.02
SDF2L1-201ENST00000248958 NKAIN4Q8IVV8 208 aa21.42■■□□□ 1.02
SDF2L1-201ENST00000248958 ANKK1Q8NFD2 765 aa21.42■■□□□ 1.02
SDF2L1-201ENST00000248958 HIST1H2ACQ93077 130 aa21.42■■□□□ 1.02
SDF2L1-201ENST00000248958 BOD1Q96IK1 185 aa21.42■■□□□ 1.02
SDF2L1-201ENST00000248958 NSL1Q96IY1 281 aa21.42■■□□□ 1.02
SDF2L1-201ENST00000248958 HSH2DQ96JZ2 352 aa21.42■■□□□ 1.02
SDF2L1-201ENST00000248958 LIME1Q9H400 295 aa21.42■■□□□ 1.02
SDF2L1-201ENST00000248958 GORASP2Q9H8Y8 452 aa21.42■■□□□ 1.02
SDF2L1-201ENST00000248958 MAGEL2Q9UJ55 1249 aa21.42■■□□□ 1.02
SDF2L1-201ENST00000248958 MED31Q9Y3C7 131 aa21.42■■□□□ 1.02
SDF2L1-201ENST00000248958 KPNA4O00629 521 aaPredicted RBP21.41■■□□□ 1.02
SDF2L1-201ENST00000248958 TRAF3IP2O43734 574 aaPredicted RBP21.41■■□□□ 1.02
SDF2L1-201ENST00000248958 ADORA3P0DMS8 318 aa21.41■■□□□ 1.02
SDF2L1-201ENST00000248958 AHCYP23526 432 aa21.41■■□□□ 1.02
SDF2L1-201ENST00000248958 PAX7P23759 505 aa21.41■■□□□ 1.02
SDF2L1-201ENST00000248958 POU3F1Q03052 451 aaPredicted RBP21.41■■□□□ 1.02
SDF2L1-201ENST00000248958 NCMAPQ5T1S8 102 aa21.41■■□□□ 1.02
SDF2L1-201ENST00000248958 ALKBH2Q6NS38 261 aa21.41■■□□□ 1.02
SDF2L1-201ENST00000248958 OFCC1Q8IZS5 231 aa21.41■■□□□ 1.02
SDF2L1-201ENST00000248958 PIK3C3Q8NEB9 887 aa21.41■■□□□ 1.02
SDF2L1-201ENST00000248958 HS3ST6Q96QI5 342 aa21.41■■□□□ 1.02
SDF2L1-201ENST00000248958 CDRT15Q96T59 188 aa21.41■■□□□ 1.02
SDF2L1-201ENST00000248958 TMEM204Q9BSN7 226 aa21.41■■□□□ 1.02
SDF2L1-201ENST00000248958 FNDC11Q9BVV2 318 aa21.41■■□□□ 1.02
SDF2L1-201ENST00000248958 MEPEQ9NQ76 525 aaPredicted RBP21.41■■□□□ 1.02
SDF2L1-201ENST00000248958 DCAF13Q9NV06 445 aaKnown RBP21.41■■□□□ 1.02
SDF2L1-201ENST00000248958 CD300AQ9UGN4 299 aa21.41■■□□□ 1.02
SDF2L1-201ENST00000248958 ITGB1BP2Q9UKP3 347 aa21.41■■□□□ 1.02
SDF2L1-201ENST00000248958 AMDHD2Q9Y303 409 aa21.41■■□□□ 1.02
SDF2L1-201ENST00000248958 ANKRD17O75179 2603 aaKnown RBP21.41■■□□□ 1.02
SDF2L1-201ENST00000248958 HPRP00739 348 aa21.4■■□□□ 1.02
SDF2L1-201ENST00000248958 ASAH2BP0C7U1 165 aa21.4■■□□□ 1.02
SDF2L1-201ENST00000248958 UMPSP11172 480 aa21.4■■□□□ 1.02
SDF2L1-201ENST00000248958 CALB2P22676 271 aa21.4■■□□□ 1.02
SDF2L1-201ENST00000248958 HOXC12P31275 282 aa21.4■■□□□ 1.02
SDF2L1-201ENST00000248958 IST1P53990 364 aa21.4■■□□□ 1.02
SDF2L1-201ENST00000248958 UGT2B15P54855 530 aa21.4■■□□□ 1.02
SDF2L1-201ENST00000248958 FOXG1P55316 489 aaPredicted RBP21.4■■□□□ 1.02
SDF2L1-201ENST00000248958 KEAP1Q14145 624 aa21.4■■□□□ 1.02
SDF2L1-201ENST00000248958 CYP4Z1Q86W10 505 aa21.4■■□□□ 1.02
SDF2L1-201ENST00000248958 DEFB107AQ8IZN7 70 aa21.4■■□□□ 1.02
SDF2L1-201ENST00000248958 RNF148Q8N7C7 305 aa21.4■■□□□ 1.02
SDF2L1-201ENST00000248958 TMEM255BQ8WV15 326 aa21.4■■□□□ 1.02
SDF2L1-201ENST00000248958 LIPHQ8WWY8 451 aa21.4■■□□□ 1.02
SDF2L1-201ENST00000248958 SGTBQ96EQ0 304 aa21.4■■□□□ 1.02
SDF2L1-201ENST00000248958 PLEKHA6Q9Y2H5 1048 aa21.4■■□□□ 1.02
SDF2L1-201ENST00000248958 RPL36A-HNRNPH2H7BZ11 118 aa21.39■■□□□ 1.01
SDF2L1-201ENST00000248958 CD3EP07766 207 aa21.39■■□□□ 1.01
SDF2L1-201ENST00000248958 SH3BGRP55822 239 aaPredicted RBP21.39■■□□□ 1.01
SDF2L1-201ENST00000248958 TRAM2Q15035 370 aa21.39■■□□□ 1.01
SDF2L1-201ENST00000248958 ACKR1Q16570 336 aa21.39■■□□□ 1.01
SDF2L1-201ENST00000248958 HMBOX1Q6NT76 420 aa21.39■■□□□ 1.01
SDF2L1-201ENST00000248958 ZNF704Q6ZNC4 412 aaPredicted RBP21.39■■□□□ 1.01
SDF2L1-201ENST00000248958 C20orf204Q6ZNR8 217 aa21.39■■□□□ 1.01
SDF2L1-201ENST00000248958 GPR137CQ8N3F9 429 aa21.39■■□□□ 1.01
SDF2L1-201ENST00000248958 MBD6Q96DN6 1003 aa21.39■■□□□ 1.01
SDF2L1-201ENST00000248958 LRR1Q96L50 414 aa21.39■■□□□ 1.01
SDF2L1-201ENST00000248958 OR2M2Q96R28 347 aa21.39■■□□□ 1.01
SDF2L1-201ENST00000248958 OBP2BQ9NPH6 170 aa21.39■■□□□ 1.01
SDF2L1-201ENST00000248958 MAGED1Q9Y5V3 778 aaPredicted RBP21.39■■□□□ 1.01
SDF2L1-201ENST00000248958 SLC25A15Q9Y619 301 aa21.39■■□□□ 1.01
SDF2L1-201ENST00000248958 ZNF726A6NNF4 738 aa21.38■■□□□ 1.01
SDF2L1-201ENST00000248958 B2RBV5 119 aa21.38■■□□□ 1.01
SDF2L1-201ENST00000248958 UPK3AO75631 287 aa21.38■■□□□ 1.01
SDF2L1-201ENST00000248958 OR7A10O76100 309 aa21.38■■□□□ 1.01
SDF2L1-201ENST00000248958 ATE1O95260 518 aa21.38■■□□□ 1.01
SDF2L1-201ENST00000248958 HLA-DOBP13765 273 aa21.38■■□□□ 1.01
SDF2L1-201ENST00000248958 FUT1P19526 365 aa21.38■■□□□ 1.01
SDF2L1-201ENST00000248958 TCN1P20061 433 aaPredicted RBP21.38■■□□□ 1.01
SDF2L1-201ENST00000248958 C9orf135Q5VTT2 229 aa21.38■■□□□ 1.01
SDF2L1-201ENST00000248958 KLHL17Q6TDP4 642 aa21.38■■□□□ 1.01
SDF2L1-201ENST00000248958 KLHL24Q6TFL4 600 aa21.38■■□□□ 1.01
SDF2L1-201ENST00000248958 SEZ6L2Q6UXD5 910 aa21.38■■□□□ 1.01
SDF2L1-201ENST00000248958 SLC46A3Q7Z3Q1 461 aa21.38■■□□□ 1.01
SDF2L1-201ENST00000248958 NANOGNBQ7Z5D8 188 aa21.38■■□□□ 1.01
SDF2L1-201ENST00000248958 ARHGAP24Q8N264 748 aa21.38■■□□□ 1.01
SDF2L1-201ENST00000248958 OR52N5Q8NH56 324 aa21.38■■□□□ 1.01
SDF2L1-201ENST00000248958 BCAS4Q8TDM0 211 aa21.38■■□□□ 1.01
SDF2L1-201ENST00000248958 ADAD1Q96M93 576 aaKnown RBP21.38■■□□□ 1.01
SDF2L1-201ENST00000248958 ALKBH3Q96Q83 286 aaPredicted RBP21.38■■□□□ 1.01
SDF2L1-201ENST00000248958 ANKRD19PQ9H560 264 aa21.38■■□□□ 1.01
SDF2L1-201ENST00000248958 SLC17A5Q9NRA2 495 aa21.38■■□□□ 1.01
SDF2L1-201ENST00000248958 CCM2LQ9NUG4 571 aaPredicted RBP21.38■■□□□ 1.01
SDF2L1-201ENST00000248958 TAS2R5Q9NYW4 299 aa21.38■■□□□ 1.01
SDF2L1-201ENST00000248958 RNF115Q9Y4L5 304 aa21.38■■□□□ 1.01
SDF2L1-201ENST00000248958 RAI1Q7Z5J4 1906 aaPredicted RBP21.37■■□□□ 1.01
SDF2L1-201ENST00000248958 C11orf98E9PRG8 122 aa21.37■■□□□ 1.01
SDF2L1-201ENST00000248958 WNT11O96014 354 aa21.37■■□□□ 1.01
SDF2L1-201ENST00000248958 HOXB1P14653 301 aaPredicted RBP21.37■■□□□ 1.01
SDF2L1-201ENST00000248958 YAP1P46937 504 aaKnown RBP21.37■■□□□ 1.01
SDF2L1-201ENST00000248958 PRPS1P60891 318 aa21.37■■□□□ 1.01
SDF2L1-201ENST00000248958 ADAM5Q6NVV9 412 aa21.37■■□□□ 1.01
SDF2L1-201ENST00000248958 NHLRC1Q6VVB1 395 aa21.37■■□□□ 1.01
SDF2L1-201ENST00000248958 RNF113BQ8IZP6 322 aaKnown RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms