RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 MyorgQ69ZQ1 716 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 D11Wsu47eQ6PIX9 558 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Vangl1Q80Z96 526 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Stk17bQ8BG48 372 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Rbm45Q8BHN5 476 aaKnown RBP9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Lix1lQ8BQ89 337 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Zbtb37Q8C3U9 504 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Pgm2l1Q8CAA7 621 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Hyal1Q91ZJ9 462 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Galnt11Q921L8 608 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Ripply3Q924S9 152 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Ttc9bQ9D6E4 239 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Topaz1E5FYH1 1653 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Vmn2r69G3XA45 850 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Zfp955bL7N232 545 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Dmp1O55188 503 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 BlkP16277 499 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Gabrr1P56475 480 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Mmp25Q3U435 615 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 C130050O18RikQ497Y9 356 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Fam173aQ501J2 229 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Slc38a9Q8BGD6 560 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Rnf222Q8CEF8 211 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Olfr558Q8VGZ7 317 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Rtl8bQ9D1F0 113 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 5830473C10RikF8VQ07 620 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 AldocP05063 363 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Tmem14aP56983 99 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Tra2bP62996 288 aaKnown RBP9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Tle3Q08122 772 aaKnown RBP9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Olfr1225Q7TR01 311 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Gpr20Q8BYC4 358 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Spem2Q8C5U4 503 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Egln3Q91UZ4 239 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Ubl7Q91W67 380 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Gje1Q9CX92 205 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Slco6d1Q9D5W6 683 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Ndufa9Q9DC69 377 aaKnown RBP9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Olfr27Q9EQ90 311 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Plscr3Q9JIZ9 296 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 Tbl2Q9R099 442 aaKnown RBP9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 RictorQ6QI06 1708 aa9.18□□□□□ -0.94
Syne1-201ENSMUST00000041639 1810010D01RikA0A1L1SR87 51 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Vmn2r96E9PZU5 664 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Gm17728E9Q5K2 132 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Gm5458L7N219 204 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 PomcP01193 235 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Limk1P53668 647 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Gm5127Q3UQH6 212 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Wdr92Q8BGF3 357 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Zfp874aQ8BX23 447 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Slc43a2Q8CGA3 568 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Vmn1r210Q8R274 306 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Olfr820Q8VFU5 312 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Naalad2Q9CZR2 740 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Rhox2aQ9D4Y3 191 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Dusp6Q9DBB1 381 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Fezf2Q9ESP5 455 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Gm43951A0A0N4SUT6 962 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Ndor1A2AI05 598 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Zfp442A2AQA0 667 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 4931429L15RikE9PVU2 379 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Gm20518E9Q548 580 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Eef1a1P10126 462 aaKnown RBP9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Il10P18893 178 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Mmp12P34960 473 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 RelbQ04863 558 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Pon2Q62086 354 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Olfr774Q7TRI5 312 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Fbxo5Q7TSG3 421 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Ccdc142Q8CAI1 738 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 4921517D22RikQ8CET0 269 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Mboat2Q8R3I2 519 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 BanpQ8VBU8 548 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Thap7Q8VCZ3 309 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Olfr998Q8VF76 314 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Olfr1141Q8VFQ7 311 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Arhgap8Q9CXP4 425 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Senp8Q9D2Z4 221 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Vstm5Q9D806 199 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Cdc20Q9JJ66 499 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 C1galt1c1Q9JMG2 316 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Ppm1dQ9QZ67 598 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 GzmmO08643 264 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Prrt1O35449 306 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 SpibO35906 267 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 EhfO70273 300 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Chrnb1P09690 501 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Slc1a3P56564 543 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Fut7Q11131 389 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 MthfsdQ3URQ7 372 aaKnown RBP9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 E2f1Q61501 430 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 SypQ62277 314 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Sec22aQ8BH47 307 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Slc6a17Q8BJI1 727 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 PisdQ8BSF4 406 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Slc1a7Q8JZR4 559 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Agfg1Q8K2K6 561 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Olfr522Q8VGL1 312 aa9.17□□□□□ -0.94
Syne1-201ENSMUST00000041639 Polr2hQ923G2 150 aa9.17□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 32.9 ms