RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Rhbdd3Q8BP97 385 aa15.54■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Olfr516Q8VFZ5 314 aa15.54■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Idh3bQ91VA7 384 aa15.54■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Popdc3Q9ES81 291 aa15.54■□□□□ 0.08
Ctcf-201ENSMUST00000005841 BvesQ9ES83 358 aa15.54■□□□□ 0.08
Ctcf-201ENSMUST00000005841 PbkQ9JJ78 330 aa15.54■□□□□ 0.08
Ctcf-201ENSMUST00000005841 SpastQ9QYY8 614 aa15.54■□□□□ 0.08
Ctcf-201ENSMUST00000005841 PtgfrnQ9WV91 879 aa15.54■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Gpr137cE9Q343 423 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Psmb5O55234 264 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 PlauP06869 433 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Xkr9Q5GH62 373 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Olfr1212Q7TR08 311 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Olfr384Q7TRX8 312 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Slc30a8Q8BGG0 367 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 PigmQ8C2R7 423 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 GatcQ8CBY0 155 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Mfsd4b2Q9D8I5 366 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Sp6Q9ESX2 376 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 TollipQ9QZ06 274 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Vmn2r110E9PWD5 858 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Pcdh17E9PXF0 1157 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Nr1h5E9Q5A6 505 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Hdac3O88895 424 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 H2-EaP01904 255 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 P04224 255 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Il5P04401 133 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Cxcl9P18340 126 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Hs6st2Q80UW0 612 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Cdc73Q8JZM7 531 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Sh3glb2Q8R3V5 400 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Asb13Q8VBX0 278 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 HnrnpllQ921F4 591 aaKnown RBP15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Ncbp2Q9CQ49 156 aaKnown RBP15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 5330417H12RikQ9D3P2 110 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Tmigd1Q9D7L8 261 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Phospho2Q9D9M5 241 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Plxnd1Q3UH93 1925 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Olfr1130A0A1L1SQT2 314 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Olfr1129A2AV41 314 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Bhlhe40O35185 411 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Mrpl23O35972 146 aaKnown RBP15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Map2k6P70236 334 aaKnown RBP15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Gch1Q05915 241 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Defb43Q30KM9 69 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 ThrspQ62264 150 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Adam20Q7M763 760 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Q80UB0 333 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Acaa2Q8BWT1 397 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Serpina11Q8CIE0 424 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Med28Q920D3 178 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Slc2a8Q9JIF3 477 aa15.53■□□□□ 0.08
Ctcf-201ENSMUST00000005841 CatP24270 527 aa15.52■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Mc3rP33033 323 aa15.52■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Lrrn1Q61809 716 aa15.52■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Ttf1Q62187 859 aa15.52■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Slc6a7Q6PGE7 637 aa15.52■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Slc30a6Q8BJM5 460 aa15.52■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Olfr881Q8VF63 314 aa15.52■□□□□ 0.08
Ctcf-201ENSMUST00000005841 Wrap73Q9JM98 462 aa15.52■□□□□ 0.08
Ctcf-201ENSMUST00000005841 GcatO88986 416 aa15.52■□□□□ 0.07
Ctcf-201ENSMUST00000005841 P03976 113 aa15.52■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Gstm2P15626 218 aa15.52■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Agtr1bP29755 359 aa15.52■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Tas2r40Q7TQB8 319 aa15.52■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Q8C4X7 151 aa15.52■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Phf21bQ8C966 487 aa15.52■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Esco2Q8CIB9 592 aaKnown RBP15.52■□□□□ 0.07
Ctcf-201ENSMUST00000005841 PhyhipQ8K0S0 330 aa15.52■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Mrpl38Q8K2M0 380 aa15.52■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Olfr342Q8VGK7 312 aa15.52■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Cep41Q99NF3 373 aa15.52■□□□□ 0.07
Ctcf-201ENSMUST00000005841 GatmQ9D964 423 aaKnown RBP15.52■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Bap18Q9DCT6 171 aa15.52■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Keg1Q9DCY0 295 aa15.52■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Jmjd6Q9ERI5 403 aa15.52■□□□□ 0.07
Ctcf-201ENSMUST00000005841 C1galt1Q9JJ06 363 aa15.52■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Dpy19l1A6X919 746 aa15.52■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Zfp707F6QUN2 391 aa15.52■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Lin7bO88951 207 aa15.52■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Apoa2P09813 102 aa15.52■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Zfp41Q02526 198 aa15.52■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Fzd8Q61091 685 aa15.52■□□□□ 0.07
Ctcf-201ENSMUST00000005841 HlxQ61670 476 aa15.52■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Ubfd1Q78JW9 368 aa15.52■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Olfr429Q7TRW1 312 aa15.52■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Rspo2Q8BFU0 243 aa15.52■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Flrt2Q8BLU0 660 aa15.52■□□□□ 0.07
Ctcf-201ENSMUST00000005841 LctlQ8K1F9 566 aa15.52■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Thap7Q8VCZ3 309 aa15.52■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Gm17949A0A1B0GRV7 212 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Zfp949E9Q732 603 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Zfp11P10751 647 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Rasl12Q08AT1 266 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Npr2Q6VVW5 1047 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Znf750Q8BH05 703 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Coro2bQ8BH44 480 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Spata2lQ8BNN1 426 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Tmem222Q8BVA2 208 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Mchr1Q8JZL2 353 aa15.51■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms