RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 MPP4Q96JB8 637 aa11.3□□□□□ -0.6
CTSD-208ENST00000636843 COX4I2Q96KJ9 171 aa11.3□□□□□ -0.6
CTSD-208ENST00000636843 DHRS1Q96LJ7 313 aa11.3□□□□□ -0.6
CTSD-208ENST00000636843 PINK1Q9BXM7 581 aa11.3□□□□□ -0.6
CTSD-208ENST00000636843 ACTRT3Q9BYD9 372 aa11.3□□□□□ -0.6
CTSD-208ENST00000636843 UBTD1Q9HAC8 227 aa11.3□□□□□ -0.6
CTSD-208ENST00000636843 Q9N2J8 555 aa11.3□□□□□ -0.6
CTSD-208ENST00000636843 TMCC3Q9ULS5 477 aa11.3□□□□□ -0.6
CTSD-208ENST00000636843 SLC9A8Q9Y2E8 581 aa11.3□□□□□ -0.6
CTSD-208ENST00000636843 PCDHGB1Q9Y5G3 927 aa11.3□□□□□ -0.6
CTSD-208ENST00000636843 NSD1Q96L73 2696 aaPredicted RBP11.29□□□□□ -0.6
CTSD-208ENST00000636843 OR2M5A3KFT3 312 aa11.29□□□□□ -0.6
CTSD-208ENST00000636843 PRAMEF27A3QJZ7 478 aa11.29□□□□□ -0.6
CTSD-208ENST00000636843 TTC36A6NLP5 189 aa11.29□□□□□ -0.6
CTSD-208ENST00000636843 C17orf51A8MQB3 221 aa11.29□□□□□ -0.6
CTSD-208ENST00000636843 NOL3O60936 208 aaKnown RBP11.29□□□□□ -0.6
CTSD-208ENST00000636843 TRMUO75648 421 aaKnown RBP11.29□□□□□ -0.6
CTSD-208ENST00000636843 CBLP22681 906 aa11.29□□□□□ -0.6
CTSD-208ENST00000636843 CCKARP32238 428 aa11.29□□□□□ -0.6
CTSD-208ENST00000636843 GGT2P36268 569 aa11.29□□□□□ -0.6
CTSD-208ENST00000636843 DYNC1I2Q13409 638 aaKnown RBP11.29□□□□□ -0.6
CTSD-208ENST00000636843 ATAD3BQ5T9A4 648 aa11.29□□□□□ -0.6
CTSD-208ENST00000636843 DEPDC4Q8N2C3 294 aa11.29□□□□□ -0.6
CTSD-208ENST00000636843 OR2L13Q8N349 312 aa11.29□□□□□ -0.6
CTSD-208ENST00000636843 LINC00471Q8N535 108 aa11.29□□□□□ -0.6
CTSD-208ENST00000636843 OR13F1Q8NGS4 319 aa11.29□□□□□ -0.6
CTSD-208ENST00000636843 FNDC9Q8TBE3 224 aa11.29□□□□□ -0.6
CTSD-208ENST00000636843 DUSP19Q8WTR2 217 aa11.29□□□□□ -0.6
CTSD-208ENST00000636843 IPCEF1Q8WWN9 437 aaPredicted RBP11.29□□□□□ -0.6
CTSD-208ENST00000636843 ISOC1Q96CN7 298 aa11.29□□□□□ -0.6
CTSD-208ENST00000636843 C1GALT1C1Q96EU7 318 aa11.29□□□□□ -0.6
CTSD-208ENST00000636843 MS4A4EQ96PG1 132 aa11.29□□□□□ -0.6
CTSD-208ENST00000636843 OR7D2Q96RA2 312 aa11.29□□□□□ -0.6
CTSD-208ENST00000636843 DOK1Q99704 481 aa11.29□□□□□ -0.6
CTSD-208ENST00000636843 CCL19Q99731 98 aa11.29□□□□□ -0.6
CTSD-208ENST00000636843 PROCRQ9UNN8 238 aa11.29□□□□□ -0.6
CTSD-208ENST00000636843 FN1P02751 2386 aaKnown RBP11.28□□□□□ -0.6
CTSD-208ENST00000636843 IGLV3-32A0A0A0MS00 114 aa11.28□□□□□ -0.6
CTSD-208ENST00000636843 H0YC42 278 aa11.28□□□□□ -0.6
CTSD-208ENST00000636843 H3BML4 177 aa11.28□□□□□ -0.6
CTSD-208ENST00000636843 H7C1Q1 480 aa11.28□□□□□ -0.6
CTSD-208ENST00000636843 FAAHO00519 579 aa11.28□□□□□ -0.6
CTSD-208ENST00000636843 SEC14L5O43304 696 aa11.28□□□□□ -0.6
CTSD-208ENST00000636843 SEC14L2O76054 403 aa11.28□□□□□ -0.6
CTSD-208ENST00000636843 LY6G6DO95868 133 aa11.28□□□□□ -0.6
CTSD-208ENST00000636843 H1F0P07305 194 aaKnown RBP11.28□□□□□ -0.6
CTSD-208ENST00000636843 CHRM4P08173 479 aa11.28□□□□□ -0.6
CTSD-208ENST00000636843 FCGR2AP12318 317 aa11.28□□□□□ -0.6
CTSD-208ENST00000636843 TBXA2RP21731 343 aa11.28□□□□□ -0.6
CTSD-208ENST00000636843 TMBIM6P55061 237 aa11.28□□□□□ -0.6
CTSD-208ENST00000636843 CLDN20P56880 219 aa11.28□□□□□ -0.6
CTSD-208ENST00000636843 C17orf67Q0P5P2 114 aa11.28□□□□□ -0.6
CTSD-208ENST00000636843 PON3Q15166 354 aa11.28□□□□□ -0.6
CTSD-208ENST00000636843 GUSBP1Q15486 140 aa11.28□□□□□ -0.6
CTSD-208ENST00000636843 GPAT3Q53EU6 434 aa11.28□□□□□ -0.6
CTSD-208ENST00000636843 XAF1Q6GPH4 301 aa11.28□□□□□ -0.6
CTSD-208ENST00000636843 CDC73Q6P1J9 531 aa11.28□□□□□ -0.6
CTSD-208ENST00000636843 FAM214BQ7L5A3 538 aa11.28□□□□□ -0.6
CTSD-208ENST00000636843 MARCH3Q86UD3 253 aa11.28□□□□□ -0.6
CTSD-208ENST00000636843 ZNF610Q8N9Z0 462 aa11.28□□□□□ -0.6
CTSD-208ENST00000636843 Q96MF0 132 aa11.28□□□□□ -0.6
CTSD-208ENST00000636843 TRNT1Q96Q11 434 aaKnown RBP11.28□□□□□ -0.6
CTSD-208ENST00000636843 DUSP21Q9H596 190 aa11.28□□□□□ -0.6
CTSD-208ENST00000636843 HHATLQ9HCP6 504 aa11.28□□□□□ -0.6
CTSD-208ENST00000636843 GIN1Q9NXP7 522 aa11.28□□□□□ -0.6
CTSD-208ENST00000636843 FLRT3Q9NZU0 649 aa11.28□□□□□ -0.6
CTSD-208ENST00000636843 MGAT4BQ9UQ53 548 aa11.28□□□□□ -0.6
CTSD-208ENST00000636843 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.27□□□□□ -0.61
CTSD-208ENST00000636843 PTGES3LE9PB15 166 aa11.27□□□□□ -0.61
CTSD-208ENST00000636843 FFAR1O14842 300 aa11.27□□□□□ -0.61
CTSD-208ENST00000636843 LGI1O95970 557 aa11.27□□□□□ -0.61
CTSD-208ENST00000636843 ADAP00813 363 aa11.27□□□□□ -0.61
CTSD-208ENST00000636843 HTR1AP08908 422 aa11.27□□□□□ -0.61
CTSD-208ENST00000636843 EPHA2P29317 976 aa11.27□□□□□ -0.61
CTSD-208ENST00000636843 FMO3P31513 532 aa11.27□□□□□ -0.61
CTSD-208ENST00000636843 SLC35A2P78381 396 aa11.27□□□□□ -0.61
CTSD-208ENST00000636843 FUT5Q11128 374 aa11.27□□□□□ -0.61
CTSD-208ENST00000636843 SGCBQ16585 318 aa11.27□□□□□ -0.61
CTSD-208ENST00000636843 TMEM44Q2T9K0 475 aa11.27□□□□□ -0.61
CTSD-208ENST00000636843 ZNF550Q7Z398 422 aa11.27□□□□□ -0.61
CTSD-208ENST00000636843 ENTHD1Q8IYW4 607 aa11.27□□□□□ -0.61
CTSD-208ENST00000636843 SVOPQ8N4V2 548 aa11.27□□□□□ -0.61
CTSD-208ENST00000636843 OR9Q2Q8NGE9 314 aa11.27□□□□□ -0.61
CTSD-208ENST00000636843 OR5M1Q8NGP8 315 aa11.27□□□□□ -0.61
CTSD-208ENST00000636843 ADAMTS15Q8TE58 950 aa11.27□□□□□ -0.61
CTSD-208ENST00000636843 MUL1Q969V5 352 aa11.27□□□□□ -0.61
CTSD-208ENST00000636843 C12orf43Q96C57 262 aaKnown RBP11.27□□□□□ -0.61
CTSD-208ENST00000636843 GIMAP5Q96F15 307 aa11.27□□□□□ -0.61
CTSD-208ENST00000636843 C16orf58Q96GQ5 468 aa11.27□□□□□ -0.61
CTSD-208ENST00000636843 NIPSNAP1Q9BPW8 284 aa11.27□□□□□ -0.61
CTSD-208ENST00000636843 LMF2Q9BU23 707 aaKnown RBP11.27□□□□□ -0.61
CTSD-208ENST00000636843 TBL1XR1Q9BZK7 514 aa11.27□□□□□ -0.61
CTSD-208ENST00000636843 RTN4RQ9BZR6 473 aa11.27□□□□□ -0.61
CTSD-208ENST00000636843 NMNAT1Q9HAN9 279 aaPredicted RBP11.27□□□□□ -0.61
CTSD-208ENST00000636843 PLSCR4Q9NRQ2 329 aa11.27□□□□□ -0.61
CTSD-208ENST00000636843 PLCXD1Q9NUJ7 323 aa11.27□□□□□ -0.61
CTSD-208ENST00000636843 RLIMQ9NVW2 624 aa11.27□□□□□ -0.61
CTSD-208ENST00000636843 EMC9Q9Y3B6 208 aa11.27□□□□□ -0.61
CTSD-208ENST00000636843 JMJD1CQ15652 2540 aa11.26□□□□□ -0.61
CTSD-208ENST00000636843 DSPPQ9NZW4 1301 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms