RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 IRF9Q00978 393 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 OXA1LQ15070 435 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 GPR19Q15760 415 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 IZUMO4Q1ZYL8 232 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 PODNL1Q6PEZ8 512 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 THNSL2Q86YJ6 484 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 SLC35F3Q8IY50 421 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 ZNF687Q8N1G0 1237 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 FITM2Q8N6M3 262 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 ISOC1Q96CN7 298 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 ELP4Q96EB1 424 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 PCED1BQ96HM7 432 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 LMF1Q96S06 567 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 GPR61Q9BZJ8 451 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 WWTR1Q9GZV5 400 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 FBXO34Q9NWN3 711 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 ZNF337Q9Y3M9 751 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 RCCD1A6NED2 376 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 ANTXRLA6NF34 631 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 ARPC3O15145 178 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 DENRO43583 198 aaKnown RBP5.63□□□□□ -1.51
SCN1A-212ENST00000636194 KLRC4O43908 158 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 ZFAND5O76080 213 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 C6orf47O95873 294 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 ELK4P28324 431 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 CCKARP32238 428 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 VASPP50552 380 aaPredicted RBP5.63□□□□□ -1.51
SCN1A-212ENST00000636194 HCCSP53701 268 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 SOX10P56693 466 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 H3F3AP84243 136 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 GALNT1Q10472 559 aaPredicted RBP5.63□□□□□ -1.51
SCN1A-212ENST00000636194 AGTRAPQ6RW13 159 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 FA2HQ7L5A8 372 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 LDB1Q86U70 411 aaPredicted RBP5.63□□□□□ -1.51
SCN1A-212ENST00000636194 SLC51AQ86UW1 340 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 RHBDD1Q8TEB9 315 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 CANT1Q8WVQ1 401 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 TMBIM1Q969X1 311 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 RAB37Q96AX2 223 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 CTDSP1Q9GZU7 261 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 KCNK15Q9H427 330 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 PRSS50Q9UI38 385 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 FBXW11Q9UKB1 542 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 M0R3H8 397 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 BET1O15155 118 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 HINT1P49773 126 aaPredicted RBP5.63□□□□□ -1.51
SCN1A-212ENST00000636194 RELBQ01201 579 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 LMAN2Q12907 356 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 PRDX4Q13162 271 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 TMEM183BQ1AE95 376 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 RNF212Q495C1 297 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 FFAR4Q5NUL3 377 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 SLC16A14Q7RTX9 510 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 PIGCQ92535 297 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 ZFYVE21Q9BQ24 234 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 FAM103A1Q9BTL3 118 aaKnown RBP5.63□□□□□ -1.51
SCN1A-212ENST00000636194 DERL2Q9GZP9 239 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 MTHFD2LQ9H903 347 aaPredicted RBP5.63□□□□□ -1.51
SCN1A-212ENST00000636194 ATRNO75882 1429 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 M0R3E3 92 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 ARHGAP33O14559 1287 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 PTTG1O95997 202 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 C8orf89P0DMQ9 161 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 FKBP2P26885 142 aaKnown RBP5.63□□□□□ -1.51
SCN1A-212ENST00000636194 NOVA1P51513 510 aaKnown RBP5.63□□□□□ -1.51
SCN1A-212ENST00000636194 CLINT1Q14677 625 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 TESK1Q15569 626 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 HENMT1Q5T8I9 393 aaKnown RBP5.63□□□□□ -1.51
SCN1A-212ENST00000636194 KLHDC10Q6PID8 442 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 PRELID2Q8N945 189 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 GABARAPL1Q9H0R8 117 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 SIX2Q9NPC8 291 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 OLAHQ9NV23 265 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 NAV3Q8IVL0 2385 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 GHRHP01286 108 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 ID1P41134 155 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 IDH3AP50213 366 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 CXADRP78310 365 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 VWA2Q5GFL6 755 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 ENTPD8Q5MY95 495 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 SLC6A19Q695T7 634 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 TMEM200AQ86VY9 491 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 LACC1Q8IV20 430 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 MISPQ8IVT2 679 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 OR2A1Q8NGT9 310 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 GPR119Q8TDV5 335 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 SLC6A18Q96N87 628 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 UQCC2Q9BRT2 126 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 DPH1Q9BZG8 443 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 MAGIXQ9H6Y5 334 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 THYN1Q9P016 225 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 MRPS2Q9Y399 296 aaKnown RBP5.63□□□□□ -1.51
SCN1A-212ENST00000636194 PARP4Q9UKK3 1724 aaKnown RBP5.63□□□□□ -1.51
SCN1A-212ENST00000636194 ROBO3Q96MS0 1386 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 NPIPB15A6NHN6 443 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 H3BSA7 217 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 FAM163BP0C2L3 166 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 OR5AC1P0C628 307 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 C5AR1P21730 350 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 EMX2Q04743 252 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms