RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 MAN2C1Q9NTJ4 1040 aa13.73□□□□□ -0.21
CLN6-211ENST00000635754 PARPBPQ9NWS1 579 aa13.73□□□□□ -0.21
CLN6-211ENST00000635754 MRPL39Q9NYK5 338 aaKnown RBP13.73□□□□□ -0.21
CLN6-211ENST00000635754 ANKHD1Q8IWZ3 2542 aaKnown RBP13.73□□□□□ -0.21
CLN6-211ENST00000635754 FREM1Q5H8C1 2179 aa13.73□□□□□ -0.21
CLN6-211ENST00000635754 HNRNPRO43390 633 aaKnown RBP13.73□□□□□ -0.21
CLN6-211ENST00000635754 IGF2P01344 180 aa13.73□□□□□ -0.21
CLN6-211ENST00000635754 HIST1H2ABP04908 130 aa13.73□□□□□ -0.21
CLN6-211ENST00000635754 UMPSP11172 480 aa13.73□□□□□ -0.21
CLN6-211ENST00000635754 ZNF43P17038 809 aa13.73□□□□□ -0.21
CLN6-211ENST00000635754 PGM2L1Q6PCE3 622 aa13.73□□□□□ -0.21
CLN6-211ENST00000635754 HIST3H2AQ7L7L0 130 aa13.73□□□□□ -0.21
CLN6-211ENST00000635754 OR5J2Q8NH18 312 aa13.73□□□□□ -0.21
CLN6-211ENST00000635754 PFN4Q8NHR9 129 aa13.73□□□□□ -0.21
CLN6-211ENST00000635754 HIST1H2ACQ93077 130 aa13.73□□□□□ -0.21
CLN6-211ENST00000635754 TMEM45BQ96B21 275 aa13.73□□□□□ -0.21
CLN6-211ENST00000635754 OXGR1Q96P68 337 aa13.73□□□□□ -0.21
CLN6-211ENST00000635754 SEPHS2Q99611 448 aa13.73□□□□□ -0.21
CLN6-211ENST00000635754 PIP5K1AQ99755 562 aa13.73□□□□□ -0.21
CLN6-211ENST00000635754 NMNAT1Q9HAN9 279 aaPredicted RBP13.73□□□□□ -0.21
CLN6-211ENST00000635754 ZNF229Q9UJW7 825 aa13.73□□□□□ -0.21
CLN6-211ENST00000635754 CENPEQ02224 2701 aa13.72□□□□□ -0.21
CLN6-211ENST00000635754 TCRBV5S2A0A599 114 aa13.72□□□□□ -0.21
CLN6-211ENST00000635754 HTR3EA5X5Y0 456 aa13.72□□□□□ -0.21
CLN6-211ENST00000635754 TUBAL3A6NHL2 446 aa13.72□□□□□ -0.21
CLN6-211ENST00000635754 ACOT8O14734 319 aa13.72□□□□□ -0.21
CLN6-211ENST00000635754 GSC2O15499 205 aa13.72□□□□□ -0.21
CLN6-211ENST00000635754 OR6A2O95222 327 aa13.72□□□□□ -0.21
CLN6-211ENST00000635754 H1F0P07305 194 aaKnown RBP13.72□□□□□ -0.21
CLN6-211ENST00000635754 PUDPQ08623 228 aa13.72□□□□□ -0.21
CLN6-211ENST00000635754 FAM27E3Q08E93 113 aa13.72□□□□□ -0.21
CLN6-211ENST00000635754 SNTB1Q13884 538 aaKnown RBP13.72□□□□□ -0.21
CLN6-211ENST00000635754 C1DQ13901 141 aaKnown RBP13.72□□□□□ -0.21
CLN6-211ENST00000635754 FGD3Q5JSP0 725 aa13.72□□□□□ -0.21
CLN6-211ENST00000635754 ZNF787Q6DD87 383 aa13.72□□□□□ -0.21
CLN6-211ENST00000635754 ZNF730Q6ZMV8 503 aa13.72□□□□□ -0.21
CLN6-211ENST00000635754 Q6ZT83 130 aa13.72□□□□□ -0.21
CLN6-211ENST00000635754 CCDC121Q6ZUS5 278 aa13.72□□□□□ -0.21
CLN6-211ENST00000635754 CREB3L2Q70SY1 520 aa13.72□□□□□ -0.21
CLN6-211ENST00000635754 RRM2BQ7LG56 351 aa13.72□□□□□ -0.21
CLN6-211ENST00000635754 AAED1Q7RTV5 226 aa13.72□□□□□ -0.21
CLN6-211ENST00000635754 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.72□□□□□ -0.21
CLN6-211ENST00000635754 SLC46A3Q7Z3Q1 461 aa13.72□□□□□ -0.21
CLN6-211ENST00000635754 ZDHHC21Q8IVQ6 265 aa13.72□□□□□ -0.21
CLN6-211ENST00000635754 KDM8Q8N371 416 aa13.72□□□□□ -0.21
CLN6-211ENST00000635754 PIK3C3Q8NEB9 887 aa13.72□□□□□ -0.21
CLN6-211ENST00000635754 ACOT11Q8WXI4 607 aaPredicted RBP13.72□□□□□ -0.21
CLN6-211ENST00000635754 SGTBQ96EQ0 304 aa13.72□□□□□ -0.21
CLN6-211ENST00000635754 ZNF385AQ96PM9 386 aaKnown RBP13.72□□□□□ -0.21
CLN6-211ENST00000635754 CADM1Q9BY67 442 aaKnown RBP13.72□□□□□ -0.21
CLN6-211ENST00000635754 MAGIXQ9H6Y5 334 aa13.72□□□□□ -0.21
CLN6-211ENST00000635754 IL1RAPQ9NPH3 570 aa13.72□□□□□ -0.21
CLN6-211ENST00000635754 C20orf141Q9NUB4 165 aa13.72□□□□□ -0.21
CLN6-211ENST00000635754 PRSS50Q9UI38 385 aa13.72□□□□□ -0.21
CLN6-211ENST00000635754 SETXQ7Z333 2677 aaKnown RBP13.72□□□□□ -0.21
CLN6-211ENST00000635754 PKDREJQ9NTG1 2253 aa13.71□□□□□ -0.21
CLN6-211ENST00000635754 LOC102725191A0A1B0GVB3 256 aa13.71□□□□□ -0.22
CLN6-211ENST00000635754 A0A1W2PRQ8 180 aa13.71□□□□□ -0.22
CLN6-211ENST00000635754 C16orf97H3BN30 126 aa13.71□□□□□ -0.22
CLN6-211ENST00000635754 PLPP3O14495 311 aa13.71□□□□□ -0.22
CLN6-211ENST00000635754 PIP5K1CO60331 668 aa13.71□□□□□ -0.22
CLN6-211ENST00000635754 DIRAS1O95057 198 aa13.71□□□□□ -0.22
CLN6-211ENST00000635754 CNOT4O95628 575 aaKnown RBP13.71□□□□□ -0.22
CLN6-211ENST00000635754 ASAH2BP0C7U1 165 aa13.71□□□□□ -0.22
CLN6-211ENST00000635754 ADORA3P0DMS8 318 aa13.71□□□□□ -0.22
CLN6-211ENST00000635754 IFI30P13284 250 aa13.71□□□□□ -0.22
CLN6-211ENST00000635754 FUT4P22083 530 aa13.71□□□□□ -0.22
CLN6-211ENST00000635754 AHCYP23526 432 aa13.71□□□□□ -0.22
CLN6-211ENST00000635754 UGT2B10P36537 528 aa13.71□□□□□ -0.22
CLN6-211ENST00000635754 KIR2DL3P43628 341 aa13.71□□□□□ -0.22
CLN6-211ENST00000635754 SMIM11AP58511 58 aa13.71□□□□□ -0.22
CLN6-211ENST00000635754 DGCR6Q14129 220 aa13.71□□□□□ -0.22
CLN6-211ENST00000635754 FLOT2Q14254 428 aa13.71□□□□□ -0.22
CLN6-211ENST00000635754 IQCCQ4KMZ1 466 aa13.71□□□□□ -0.22
CLN6-211ENST00000635754 FAM98BQ52LJ0 330 aaKnown RBP13.71□□□□□ -0.22
CLN6-211ENST00000635754 NANOGNBQ7Z5D8 188 aa13.71□□□□□ -0.22
CLN6-211ENST00000635754 UEVLDQ8IX04 471 aa13.71□□□□□ -0.22
CLN6-211ENST00000635754 NRMQ8IXM6 262 aa13.71□□□□□ -0.22
CLN6-211ENST00000635754 RNF113BQ8IZP6 322 aaKnown RBP13.71□□□□□ -0.22
CLN6-211ENST00000635754 GABRG1Q8N1C3 465 aa13.71□□□□□ -0.22
CLN6-211ENST00000635754 UBE2J2Q8N2K1 259 aa13.71□□□□□ -0.22
CLN6-211ENST00000635754 LRRC17Q8N6Y2 441 aa13.71□□□□□ -0.22
CLN6-211ENST00000635754 ZIC4Q8N9L1 334 aa13.71□□□□□ -0.22
CLN6-211ENST00000635754 MARVELD3Q96A59 401 aa13.71□□□□□ -0.22
CLN6-211ENST00000635754 BPIFA2Q96DR5 249 aa13.71□□□□□ -0.22
CLN6-211ENST00000635754 ZNF347Q96SE7 839 aa13.71□□□□□ -0.22
CLN6-211ENST00000635754 LRMDAQ9H2I8 198 aa13.71□□□□□ -0.22
CLN6-211ENST00000635754 MMADHCQ9H3L0 296 aaPredicted RBP13.71□□□□□ -0.22
CLN6-211ENST00000635754 B3GAT1Q9P2W7 334 aa13.71□□□□□ -0.22
CLN6-211ENST00000635754 TESMINQ9Y4I5 508 aa13.71□□□□□ -0.22
CLN6-211ENST00000635754 CRYBG3Q68DQ2 2970 aa13.7□□□□□ -0.22
CLN6-211ENST00000635754 UNC79Q9P2D8 2635 aa13.7□□□□□ -0.22
CLN6-211ENST00000635754 A0A087WUU8 490 aa13.7□□□□□ -0.22
CLN6-211ENST00000635754 AQP12BA6NM10 295 aa13.7□□□□□ -0.22
CLN6-211ENST00000635754 MS4A18H0YCH9 400 aa13.7□□□□□ -0.22
CLN6-211ENST00000635754 EBAG9O00559 213 aa13.7□□□□□ -0.22
CLN6-211ENST00000635754 AKAP8O43823 692 aaKnown RBP13.7□□□□□ -0.22
CLN6-211ENST00000635754 OR7A10O76100 309 aa13.7□□□□□ -0.22
CLN6-211ENST00000635754 GADD45GO95257 159 aa13.7□□□□□ -0.22
CLN6-211ENST00000635754 FUT1P19526 365 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms