RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 ACTR6Q9GZN1 396 aa12.4□□□□□ -0.42
SNRPA1-216ENST00000626000 SLCO5A1Q9H2Y9 848 aa12.4□□□□□ -0.42
SNRPA1-216ENST00000626000 RASSF1Q9NS23 344 aa12.4□□□□□ -0.42
SNRPA1-216ENST00000626000 METRNQ9UJH8 293 aa12.4□□□□□ -0.42
SNRPA1-216ENST00000626000 MED31Q9Y3C7 131 aa12.4□□□□□ -0.42
SNRPA1-216ENST00000626000 CACNA1DQ01668 2161 aa12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 FAM221AA4D161 298 aa12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 ZNF814B7Z6K7 855 aa12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 KRT33AO76009 404 aa12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 ADAP00813 363 aa12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 BGLAPP02818 100 aa12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 MT-ND1P03886 318 aa12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 HOXC12P31275 282 aa12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 CCKARP32238 428 aa12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 OR1E2P47887 323 aa12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 P2RY4P51582 365 aa12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 SH3BGRP55822 239 aaPredicted RBP12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 SMIM11AP58511 58 aa12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 SLC25A3Q00325 362 aa12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 IL1RL1Q01638 556 aa12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 PUDPQ08623 228 aa12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 TRAM2Q15035 370 aa12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 ZNF74Q16587 644 aa12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 ANKDD1AQ495B1 522 aa12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 DNAL1Q4LDG9 190 aa12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 BEX5Q5H9J7 111 aa12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 TIMM23BQ5SRD1 257 aa12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 BHLHA15Q7RTS1 189 aaPredicted RBP12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 PXKQ7Z7A4 578 aa12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 CXorf67Q86X51 503 aaPredicted RBP12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 RBM45Q8IUH3 476 aaKnown RBP12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 RNF113BQ8IZP6 322 aaKnown RBP12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 OR5J2Q8NH18 312 aa12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 LINC01560Q8TB33 94 aa12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 TMEM239Q8WW34 195 aa12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 MUCL1Q96DR8 90 aa12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 DNAJA3Q96EY1 480 aa12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 WFIKKN1Q96NZ8 548 aa12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 WFDC6Q9BQY6 131 aa12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 POLDIP3Q9BY77 421 aaKnown RBP12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 LINC00470Q9BZP3 86 aa12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 NDEL1Q9GZM8 345 aa12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 CLEC4MQ9H2X3 399 aaPredicted RBP12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 KRCC1Q9NPI7 259 aaPredicted RBP12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 STX18Q9P2W9 335 aaKnown RBP12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 CD300AQ9UGN4 299 aa12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 EGFL7Q9UHF1 273 aa12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 ENPP4Q9Y6X5 453 aa12.39□□□□□ -0.43
SNRPA1-216ENST00000626000 CIB4A0PJX0 185 aa12.38□□□□□ -0.43
SNRPA1-216ENST00000626000 ZNF587BE7ETH6 402 aa12.38□□□□□ -0.43
SNRPA1-216ENST00000626000 RAMP1O60894 148 aa12.38□□□□□ -0.43
SNRPA1-216ENST00000626000 ENTPD5O75356 428 aa12.38□□□□□ -0.43
SNRPA1-216ENST00000626000 SLC43A1O75387 559 aa12.38□□□□□ -0.43
SNRPA1-216ENST00000626000 LYPD3O95274 346 aa12.38□□□□□ -0.43
SNRPA1-216ENST00000626000 PRF1P14222 555 aa12.38□□□□□ -0.43
SNRPA1-216ENST00000626000 RHCEP18577 417 aa12.38□□□□□ -0.43
SNRPA1-216ENST00000626000 KLK2P20151 261 aa12.38□□□□□ -0.43
SNRPA1-216ENST00000626000 RASSF2P50749 326 aa12.38□□□□□ -0.43
SNRPA1-216ENST00000626000 ZP4Q12836 540 aa12.38□□□□□ -0.43
SNRPA1-216ENST00000626000 PIN1Q13526 163 aaPredicted RBP12.38□□□□□ -0.43
SNRPA1-216ENST00000626000 TAF11Q15544 211 aa12.38□□□□□ -0.43
SNRPA1-216ENST00000626000 RRM2BQ7LG56 351 aa12.38□□□□□ -0.43
SNRPA1-216ENST00000626000 NANOGNBQ7Z5D8 188 aa12.38□□□□□ -0.43
SNRPA1-216ENST00000626000 CDK20Q8IZL9 346 aa12.38□□□□□ -0.43
SNRPA1-216ENST00000626000 RBM15BQ8NDT2 890 aaKnown RBP12.38□□□□□ -0.43
SNRPA1-216ENST00000626000 PIK3C3Q8NEB9 887 aa12.38□□□□□ -0.43
SNRPA1-216ENST00000626000 LIPHQ8WWY8 451 aa12.38□□□□□ -0.43
SNRPA1-216ENST00000626000 LURAP1Q96LR2 239 aa12.38□□□□□ -0.43
SNRPA1-216ENST00000626000 ADAD1Q96M93 576 aaKnown RBP12.38□□□□□ -0.43
SNRPA1-216ENST00000626000 PRSS27Q9BQR3 290 aa12.38□□□□□ -0.43
SNRPA1-216ENST00000626000 OBP2BQ9NPH6 170 aa12.38□□□□□ -0.43
SNRPA1-216ENST00000626000 B3GAT2Q9NPZ5 323 aa12.38□□□□□ -0.43
SNRPA1-216ENST00000626000 ACTR3BQ9P1U1 418 aa12.38□□□□□ -0.43
SNRPA1-216ENST00000626000 PRSS50Q9UI38 385 aa12.38□□□□□ -0.43
SNRPA1-216ENST00000626000 MAGED1Q9Y5V3 778 aaPredicted RBP12.38□□□□□ -0.43
SNRPA1-216ENST00000626000 ITPR2Q14571 2701 aa12.37□□□□□ -0.43
SNRPA1-216ENST00000626000 ARPC2O15144 300 aa12.37□□□□□ -0.43
SNRPA1-216ENST00000626000 UMPSP11172 480 aa12.37□□□□□ -0.43
SNRPA1-216ENST00000626000 NCK1P16333 377 aa12.37□□□□□ -0.43
SNRPA1-216ENST00000626000 TCN1P20061 433 aaPredicted RBP12.37□□□□□ -0.43
SNRPA1-216ENST00000626000 TNFRSF1BP20333 461 aa12.37□□□□□ -0.43
SNRPA1-216ENST00000626000 MPGP29372 298 aa12.37□□□□□ -0.43
SNRPA1-216ENST00000626000 KLHL24Q6TFL4 600 aa12.37□□□□□ -0.43
SNRPA1-216ENST00000626000 VTCN1Q7Z7D3 282 aa12.37□□□□□ -0.43
SNRPA1-216ENST00000626000 EPHX4Q8IUS5 362 aa12.37□□□□□ -0.43
SNRPA1-216ENST00000626000 RNF148Q8N7C7 305 aa12.37□□□□□ -0.43
SNRPA1-216ENST00000626000 ACOT11Q8WXI4 607 aaPredicted RBP12.37□□□□□ -0.43
SNRPA1-216ENST00000626000 S100PBPQ96BU1 408 aa12.37□□□□□ -0.43
SNRPA1-216ENST00000626000 ZNF775Q96BV0 537 aaPredicted RBP12.37□□□□□ -0.43
SNRPA1-216ENST00000626000 SGTBQ96EQ0 304 aa12.37□□□□□ -0.43
SNRPA1-216ENST00000626000 PYURFQ96I23 114 aa12.37□□□□□ -0.43
SNRPA1-216ENST00000626000 BOD1Q96IK1 185 aa12.37□□□□□ -0.43
SNRPA1-216ENST00000626000 TRIM15Q9C019 465 aa12.37□□□□□ -0.43
SNRPA1-216ENST00000626000 AMBRA1Q9C0C7 1298 aa12.37□□□□□ -0.43
SNRPA1-216ENST00000626000 A4GNTQ9UNA3 340 aa12.37□□□□□ -0.43
SNRPA1-216ENST00000626000 TMEM5Q9Y2B1 443 aa12.37□□□□□ -0.43
SNRPA1-216ENST00000626000 ABCA12Q86UK0 2595 aa12.37□□□□□ -0.43
SNRPA1-216ENST00000626000 A0A1W2PRQ8 180 aa12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 OR5H1A6NKK0 313 aa12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 ZNF726A6NNF4 738 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms