RNA–Protein interactions for RNA: ENST00000625778.2

UBE3A-209, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-209ENST00000625778 ACTC1P68032 377 aa12.74□□□□□ -0.37
UBE3A-209ENST00000625778 ACTA1P68133 377 aa12.74□□□□□ -0.37
UBE3A-209ENST00000625778 ZNF660Q6AZW8 331 aaPredicted RBP12.74□□□□□ -0.37
UBE3A-209ENST00000625778 RD3Q7Z3Z2 195 aa12.74□□□□□ -0.37
UBE3A-209ENST00000625778 ZAR1Q86SH2 424 aa12.74□□□□□ -0.37
UBE3A-209ENST00000625778 NRROSQ86YC3 692 aa12.74□□□□□ -0.37
UBE3A-209ENST00000625778 TMEM185AQ8NFB2 350 aa12.74□□□□□ -0.37
UBE3A-209ENST00000625778 OR4C16Q8NGL9 310 aa12.74□□□□□ -0.37
UBE3A-209ENST00000625778 NR4A3Q92570 626 aa12.74□□□□□ -0.37
UBE3A-209ENST00000625778 RASD2Q96D21 266 aa12.74□□□□□ -0.37
UBE3A-209ENST00000625778 MS4A4EQ96PG1 132 aa12.74□□□□□ -0.37
UBE3A-209ENST00000625778 INPP5EQ9NRR6 644 aa12.74□□□□□ -0.37
UBE3A-209ENST00000625778 NCDNQ9UBB6 729 aa12.74□□□□□ -0.37
UBE3A-209ENST00000625778 FBXL3Q9UKT7 428 aa12.74□□□□□ -0.37
UBE3A-209ENST00000625778 ATG2BQ96BY7 2078 aa12.74□□□□□ -0.37
UBE3A-209ENST00000625778 POM121BA6NF01 834 aa12.74□□□□□ -0.37
UBE3A-209ENST00000625778 CCSO14618 274 aa12.74□□□□□ -0.37
UBE3A-209ENST00000625778 TXNL1O43396 289 aa12.74□□□□□ -0.37
UBE3A-209ENST00000625778 PRICKLE3O43900 615 aaPredicted RBP12.74□□□□□ -0.37
UBE3A-209ENST00000625778 VEGFDO43915 354 aa12.74□□□□□ -0.37
UBE3A-209ENST00000625778 ANXA2P07355 339 aaKnown RBP12.74□□□□□ -0.37
UBE3A-209ENST00000625778 GABRA3P34903 492 aa12.74□□□□□ -0.37
UBE3A-209ENST00000625778 RAB28P51157 221 aa12.74□□□□□ -0.37
UBE3A-209ENST00000625778 CDK3Q00526 305 aa12.74□□□□□ -0.37
UBE3A-209ENST00000625778 CMIPQ8IY22 773 aa12.74□□□□□ -0.37
UBE3A-209ENST00000625778 PM20D2Q8IYS1 436 aa12.74□□□□□ -0.37
UBE3A-209ENST00000625778 FAM71CQ8NEG0 241 aa12.74□□□□□ -0.37
UBE3A-209ENST00000625778 OR52E1Q8NGJ3 308 aa12.74□□□□□ -0.37
UBE3A-209ENST00000625778 SLC25A28Q96A46 364 aa12.74□□□□□ -0.37
UBE3A-209ENST00000625778 SEC22AQ96IW7 307 aa12.74□□□□□ -0.37
UBE3A-209ENST00000625778 PDCD10Q9BUL8 212 aa12.74□□□□□ -0.37
UBE3A-209ENST00000625778 ZNF471Q9BX82 626 aaPredicted RBP12.74□□□□□ -0.37
UBE3A-209ENST00000625778 TMEM74BQ9NUR3 256 aa12.74□□□□□ -0.37
UBE3A-209ENST00000625778 ZNF223Q9UK11 482 aaPredicted RBP12.74□□□□□ -0.37
UBE3A-209ENST00000625778 FOXJ3Q9UPW0 622 aa12.74□□□□□ -0.37
UBE3A-209ENST00000625778 GXYLT2A0PJZ3 443 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 KCNAB3O43448 404 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 GSTZ1O43708 216 aaPredicted RBP12.73□□□□□ -0.37
UBE3A-209ENST00000625778 RBBP9O75884 186 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 ZFPL1O95159 310 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 MEOX2P50222 304 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 NANOS3P60323 173 aaKnown RBP12.73□□□□□ -0.37
UBE3A-209ENST00000625778 EIPR1Q53HC9 387 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 DCST2Q5T1A1 773 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 LIN54Q6MZP7 749 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 TSSK4Q6SA08 328 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 CCDC36Q8IYA8 594 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 CRIPAKQ8N1N5 446 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 CLRN3Q8NCR9 226 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 PXT1Q8NFP0 134 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 ZMAT3Q9HA38 289 aaKnown RBP12.73□□□□□ -0.37
UBE3A-209ENST00000625778 KCNE5Q9UJ90 142 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 SLC22A7Q9Y694 548 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 TRAV18A0A075B6X5 111 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 TBC1D3EA0A087X179 549 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 MCIDASD6RGH6 385 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 RNGTTO60942 597 aaKnown RBP12.73□□□□□ -0.37
UBE3A-209ENST00000625778 APOC1P02654 83 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 FGF2P09038 288 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 VASPP50552 380 aaPredicted RBP12.73□□□□□ -0.37
UBE3A-209ENST00000625778 LUMP51884 338 aaPredicted RBP12.73□□□□□ -0.37
UBE3A-209ENST00000625778 TRA2BP62995 288 aaKnown RBP12.73□□□□□ -0.37
UBE3A-209ENST00000625778 TMEM35AQ53FP2 167 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 METRNLQ641Q3 311 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 BAIAP2L2Q6UXY1 529 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 ZNF704Q6ZNC4 412 aaPredicted RBP12.73□□□□□ -0.37
UBE3A-209ENST00000625778 CDH26Q8IXH8 852 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 OR2AK2Q8NG84 335 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 MOAP1Q96BY2 351 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 ZNF75AQ96N20 296 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 FOXN4Q96NZ1 517 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 MBNL1Q9NR56 388 aaKnown RBP12.73□□□□□ -0.37
UBE3A-209ENST00000625778 CES1P1Q9UKY3 287 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 COL4A3Q01955 1670 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 OR2M5A3KFT3 312 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 TVP23AA6NH52 213 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 ACOT7O00154 380 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 NDUFB6O95139 128 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 SLC6A6P31641 620 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 CLINT1Q14677 625 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 ARHGAP19Q14CB8 494 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 DHCR24Q15392 516 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 TAF13Q15543 124 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 ALG10BQ5I7T1 473 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 PLPP4Q5VZY2 271 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 PWWP2BQ6NUJ5 590 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 SEZ6L2Q6UXD5 910 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 RBMS3Q6XE24 437 aaKnown RBP12.73□□□□□ -0.37
UBE3A-209ENST00000625778 BPIFCQ8NFQ6 507 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 CD99L2Q8TCZ2 262 aa12.73□□□□□ -0.37
UBE3A-209ENST00000625778 WDR77Q9BQA1 342 aaPredicted RBP12.73□□□□□ -0.37
UBE3A-209ENST00000625778 PITHD1Q9GZP4 211 aaPredicted RBP12.73□□□□□ -0.37
UBE3A-209ENST00000625778 SNRNP200O75643 2136 aaKnown RBP12.72□□□□□ -0.37
UBE3A-209ENST00000625778 A0A1B0GWA3 101 aa12.72□□□□□ -0.37
UBE3A-209ENST00000625778 ANKRD20A5PA0PJZ0 165 aa12.72□□□□□ -0.37
UBE3A-209ENST00000625778 TSPAN11A1L157 253 aa12.72□□□□□ -0.37
UBE3A-209ENST00000625778 H7C1C5 153 aa12.72□□□□□ -0.37
UBE3A-209ENST00000625778 INHAP05111 366 aa12.72□□□□□ -0.37
UBE3A-209ENST00000625778 DPP4P27487 766 aa12.72□□□□□ -0.37
UBE3A-209ENST00000625778 LCN6P62502 163 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms