RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 MLLT11Q13015 90 aaPredicted RBP19.37■□□□□ 0.69
SPAST-204ENST00000621856 KRR1Q13601 381 aaKnown RBP19.37■□□□□ 0.69
SPAST-204ENST00000621856 EMC4Q5J8M3 183 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 GPR139Q6DWJ6 353 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 KLHL36Q8N4N3 616 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 ACBD7Q8N6N7 88 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 TMEM99Q8N816 258 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 ZNF417Q8TAU3 575 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 JSRP1Q96MG2 331 aaPredicted RBP19.37■□□□□ 0.69
SPAST-204ENST00000621856 TSPAN32Q96QS1 320 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 ZNF587Q96SQ5 575 aaPredicted RBP19.37■□□□□ 0.69
SPAST-204ENST00000621856 JAM3Q9BX67 310 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 INIPQ9NRY2 104 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 ERVK13-1Q9NX77 482 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 SPIN1Q9Y657 262 aaPredicted RBP19.37■□□□□ 0.69
SPAST-204ENST00000621856 AHCTF1Q8WYP5 2266 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 OR6C68A6NDL8 312 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 C12orf71A8MTZ7 269 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 H3BML4 177 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 J3QRE1 110 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 SNPHO15079 494 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 AHCYL1O43865 530 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 TXNDC12O95881 172 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 P04436 131 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 IDUAP35475 653 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 CDKN2AP42771 156 aaKnown RBP19.37■□□□□ 0.69
SPAST-204ENST00000621856 NCS1P62166 190 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 POU4F2Q12837 409 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 MFSD13AQ14CX5 517 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 OR7A5Q15622 319 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 SSX1Q16384 188 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 JMJD6Q6NYC1 403 aaPredicted RBP19.37■□□□□ 0.69
SPAST-204ENST00000621856 OR10H4Q8NGA5 316 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 OR5M1Q8NGP8 315 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 MFSD8Q8NHS3 518 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 ZPLD1Q8TCW7 415 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 ADAMTS17Q8TE56 1095 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 GATAD2BQ8WXI9 593 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 KIAA1143Q96AT1 154 aaPredicted RBP19.37■□□□□ 0.69
SPAST-204ENST00000621856 ARL5BQ96KC2 179 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 IP6K3Q96PC2 410 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 TBX5Q99593 518 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 PROK2Q9HC23 129 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 MRPL39Q9NYK5 338 aaKnown RBP19.37■□□□□ 0.69
SPAST-204ENST00000621856 HAO2Q9NYQ3 351 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 A0A087WZY1 265 aa19.36■□□□□ 0.69
SPAST-204ENST00000621856 FTCDNL1E5RQL4 147 aa19.36■□□□□ 0.69
SPAST-204ENST00000621856 DXOO77932 396 aaKnown RBP19.36■□□□□ 0.69
SPAST-204ENST00000621856 IL11P20809 199 aa19.36■□□□□ 0.69
SPAST-204ENST00000621856 EIF1P41567 113 aaKnown RBP19.36■□□□□ 0.69
SPAST-204ENST00000621856 PON3Q15166 354 aa19.36■□□□□ 0.69
SPAST-204ENST00000621856 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.36■□□□□ 0.69
SPAST-204ENST00000621856 MDGA2Q7Z553 956 aa19.36■□□□□ 0.69
SPAST-204ENST00000621856 BEST3Q8N1M1 668 aa19.36■□□□□ 0.69
SPAST-204ENST00000621856 GALNT15Q8N3T1 639 aa19.36■□□□□ 0.69
SPAST-204ENST00000621856 OR1J4Q8NGS1 313 aa19.36■□□□□ 0.69
SPAST-204ENST00000621856 NDNFQ8TB73 568 aa19.36■□□□□ 0.69
SPAST-204ENST00000621856 ZMYND19Q96E35 227 aaPredicted RBP19.36■□□□□ 0.69
SPAST-204ENST00000621856 DDOQ99489 341 aa19.36■□□□□ 0.69
SPAST-204ENST00000621856 POTEKPQ9BYX7 375 aa19.36■□□□□ 0.69
SPAST-204ENST00000621856 OR51E2Q9H255 320 aa19.36■□□□□ 0.69
SPAST-204ENST00000621856 ADGRL4Q9HBW9 690 aa19.36■□□□□ 0.69
SPAST-204ENST00000621856 ASB6Q9NWX5 421 aa19.36■□□□□ 0.69
SPAST-204ENST00000621856 ZNF346Q9UL40 294 aaKnown RBP19.36■□□□□ 0.69
SPAST-204ENST00000621856 CORINQ9Y5Q5 1042 aa19.36■□□□□ 0.69
SPAST-204ENST00000621856 LOC100506127A0A0U1RQW1 187 aa19.35■□□□□ 0.69
SPAST-204ENST00000621856 DAPL1A0PJW8 107 aa19.35■□□□□ 0.69
SPAST-204ENST00000621856 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.35■□□□□ 0.69
SPAST-204ENST00000621856 PLPP3O14495 311 aa19.35■□□□□ 0.69
SPAST-204ENST00000621856 EFNA2O43921 213 aa19.35■□□□□ 0.69
SPAST-204ENST00000621856 SNX4O95219 450 aa19.35■□□□□ 0.69
SPAST-204ENST00000621856 SBK2P0C263 348 aa19.35■□□□□ 0.69
SPAST-204ENST00000621856 SPI1P17947 270 aa19.35■□□□□ 0.69
SPAST-204ENST00000621856 CD79BP40259 229 aa19.35■□□□□ 0.69
SPAST-204ENST00000621856 TIMM50Q3ZCQ8 353 aa19.35■□□□□ 0.69
SPAST-204ENST00000621856 C3orf33Q6P1S2 294 aa19.35■□□□□ 0.69
SPAST-204ENST00000621856 OR51L1Q8NGJ5 315 aa19.35■□□□□ 0.69
SPAST-204ENST00000621856 SMPDL3BQ92485 455 aa19.35■□□□□ 0.69
SPAST-204ENST00000621856 PSMF1Q92530 271 aa19.35■□□□□ 0.69
SPAST-204ENST00000621856 ZBTB8AQ96BR9 441 aa19.35■□□□□ 0.69
SPAST-204ENST00000621856 RPRD1BQ9NQG5 326 aaKnown RBP19.35■□□□□ 0.69
SPAST-204ENST00000621856 ANKRD33BA6NCL7 494 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 CDRT15L2A8MXV6 281 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 PLGP00747 810 aaPredicted RBP19.34■□□□□ 0.69
SPAST-204ENST00000621856 RENP00797 406 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 LIFP15018 202 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 NOVA1P51513 510 aaKnown RBP19.34■□□□□ 0.69
SPAST-204ENST00000621856 OC90Q02509 493 aaPredicted RBP19.34■□□□□ 0.69
SPAST-204ENST00000621856 MESTQ5EB52 335 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 SLC35D3Q5M8T2 416 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 DCAF10Q5QP82 559 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 TMPRSS11AQ6ZMR5 421 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 GPALPP1Q8IXQ4 340 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 OR52N1Q8NH53 320 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 GNRHR2Q96P88 292 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 CHCHD6Q9BRQ6 235 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 NMNAT2Q9BZQ4 307 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 ISYNA1Q9NPH2 558 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 INPP5EQ9NRR6 644 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 SACM1LQ9NTJ5 587 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms