RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 GGT2P36268 569 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 ETV6P41212 452 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 STARP49675 285 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 CLK1P49759 484 aaKnown RBP4.73□□□□□ -1.65
SHMT1-211ENST00000618902 DAPP51397 102 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 SUMO3P55854 103 aaPredicted RBP4.73□□□□□ -1.65
SHMT1-211ENST00000618902 CLDN15P56746 228 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 PCBP3P57721 371 aaKnown RBP4.73□□□□□ -1.65
SHMT1-211ENST00000618902 CDC42P60953 191 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 CDK6Q00534 326 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 SORDQ00796 357 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 MAD2L1BPQ15013 274 aaPredicted RBP4.73□□□□□ -1.65
SHMT1-211ENST00000618902 C3AR1Q16581 482 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 MICAQ29983 383 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 ZNF404Q494X3 552 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 GPAT3Q53EU6 434 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 IFI44LQ53G44 452 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 SLC25A30Q5SVS4 291 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 ATAD3BQ5T9A4 648 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 NSUN5P2Q63ZY6 315 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 ZNF836Q6ZNA1 936 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 NCCRP1Q6ZVX7 275 aaPredicted RBP4.73□□□□□ -1.65
SHMT1-211ENST00000618902 GDF7Q7Z4P5 450 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 FJX1Q86VR8 437 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 CYP4Z1Q86W10 505 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 VRK2Q86Y07 508 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 KIF18BQ86Y91 864 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 OFCC1Q8IZS5 231 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 CLIP4Q8N3C7 705 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 RPRMLQ8N4K4 120 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 FAM83FQ8NEG4 500 aaPredicted RBP4.73□□□□□ -1.65
SHMT1-211ENST00000618902 TOR1AIP2Q8NFQ8 470 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 GPR32P1Q8NGA4 272 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 SETD6Q8TBK2 473 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 PHOSPHO1Q8TCT1 267 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 DYNC2LI1Q8TCX1 351 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 ZBTB8AQ96BR9 441 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 TAMM41Q96BW9 452 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 ZHX1-C8orf76Q96EF9 292 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 ZNF300Q96RE9 604 aaPredicted RBP4.73□□□□□ -1.65
SHMT1-211ENST00000618902 SIGLEC11Q96RL6 698 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 PIGQQ9BRB3 760 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 CCDC32Q9BV29 185 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 SPATA5L1Q9BVQ7 753 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 CDCA4Q9BXL8 241 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 TBL1XR1Q9BZK7 514 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 CCDC90BQ9GZT6 254 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 NXF2Q9GZY0 626 aaKnown RBP4.73□□□□□ -1.65
SHMT1-211ENST00000618902 ENKD1Q9H0I2 346 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 MTHFD2LQ9H903 347 aaPredicted RBP4.73□□□□□ -1.65
SHMT1-211ENST00000618902 SMURF2Q9HAU4 748 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 GP6Q9HCN6 339 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 KCNJ16Q9NPI9 418 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 AKIP1Q9NQ31 210 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 GLRX2Q9NS18 164 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 MED17Q9NVC6 651 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 EXD2Q9NVH0 621 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 RLIMQ9NVW2 624 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 DNAJB12Q9NXW2 375 aaKnown RBP4.73□□□□□ -1.65
SHMT1-211ENST00000618902 CCDC59Q9P031 241 aaKnown RBP4.73□□□□□ -1.65
SHMT1-211ENST00000618902 PPP4R1LQ9P1A2 415 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 KIF17Q9P2E2 1029 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 KCNN3Q9UGI6 736 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 PSORS1C1Q9UIG5 152 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 OSGIN1Q9UJX0 560 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 ACAD8Q9UKU7 415 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 ICAM5Q9UMF0 924 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 LIPT1Q9Y234 373 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 CARD8Q9Y2G2 431 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 FBN2P35556 2912 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 ITPR3Q14573 2671 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 SETD2Q9BYW2 2564 aaPredicted RBP4.72□□□□□ -1.65
SHMT1-211ENST00000618902 OR2M5A3KFT3 312 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 GJE1A6NN92 205 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 EFCAB9A8MZ26 197 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 NPIPA2E9PIF3 369 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 NPIPA3F8WFD2 350 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 TNFRSF11BO00300 401 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 ETV2O00321 342 aaPredicted RBP4.72□□□□□ -1.65
SHMT1-211ENST00000618902 SYT5O00445 386 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 SCDO00767 359 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 HCRTR2O43614 444 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 NDUFB5O43674 189 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 AIREO43918 545 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 TPST2O60704 377 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 ZG16O60844 167 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 FAM20BO75063 409 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 SERPINB7O75635 380 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 TRAPPC6AO75865 159 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 ZNF682O95780 498 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 PTTG1O95997 202 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 CDK1P06493 297 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 TPOP07202 933 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 GKN3PP0CG01 181 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 GAAP10253 952 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 PEPDP12955 493 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 COX6B1P14854 86 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 HPGDP15428 266 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 CD36P16671 472 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 IGFBP2P18065 325 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms