RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 SOCS6O14544 535 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 GPRIN2O60269 458 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 OR5H8P0DN80 308 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 PCBP4P57723 403 aaKnown RBP14.04□□□□□ -0.16
COL5A1-208ENST00000618395 PLSCR3Q9NRY6 295 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 PSORS1C1Q9UIG5 152 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 KCTD3Q9Y597 815 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 SLC22A7Q9Y694 548 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 RNASEK-C17orf49H0YIS7 233 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 ATP1B1P05026 303 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 OR4A47Q6IF82 309 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 PSRC1Q6PGN9 363 aaPredicted RBP14.04□□□□□ -0.16
COL5A1-208ENST00000618395 TMEM19Q96HH6 336 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 ZNF778Q96MU6 729 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 TRAF4Q9BUZ4 470 aaPredicted RBP14.04□□□□□ -0.16
COL5A1-208ENST00000618395 MYOTQ9UBF9 498 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 SPATA31C2B4DYI2 1134 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 PIRO00625 290 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 AKR1C3P42330 323 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 SH3BP2P78314 561 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 LRIG1Q96JA1 1093 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 NAA11Q9BSU3 229 aaPredicted RBP14.03□□□□□ -0.16
COL5A1-208ENST00000618395 INIPQ9NRY2 104 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 CXCL11O14625 94 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 KCNQ2O43526 872 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 SULT1A3P0DMM9 295 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 SULT1A4P0DMN0 295 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 CT45A6P0DMU7 189 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 CT45A5P0DMU8 189 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 CT45A7P0DMV0 189 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 CT45A8P0DMV1 189 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 CT45A9P0DMV2 189 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 ZNF8P17098 575 aaPredicted RBP14.03□□□□□ -0.16
COL5A1-208ENST00000618395 GABRB1P18505 474 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 PSMB6P28072 239 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 CT45A2Q5DJT8 189 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 CT45A1Q5HYN5 189 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 FCRLBQ6BAA4 426 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 CT45A3Q8NHU0 189 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 LYSMD1Q96S90 227 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 CRTAC1Q9NQ79 661 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 CD37P11049 281 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 TMEM35AQ53FP2 167 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 TAC4Q86UU9 113 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 KLHL42Q9P2K6 505 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 KLF15Q9UIH9 416 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 VSTM2BA6NLU5 285 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 PSMB10P40306 273 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 TMEM123Q8N131 208 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 ZNF383Q8NA42 475 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 GLIS1Q8NBF1 620 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 OR13C8Q8NGS7 320 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 TXLNGYQ9BZA5 131 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 MTHFD2LQ9H903 347 aaPredicted RBP14.03□□□□□ -0.16
COL5A1-208ENST00000618395 MANSC4A6NHS7 340 aaPredicted RBP14.03□□□□□ -0.16
COL5A1-208ENST00000618395 RAD1O60671 282 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 PPOXP50336 477 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 TMEM43Q9BTV4 400 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 SLC6A14Q9UN76 642 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 DNAJC15Q9Y5T4 150 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 CEP170BQ9Y4F5 1589 aaPredicted RBP14.03□□□□□ -0.16
COL5A1-208ENST00000618395 ILKQ13418 452 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 TMEM268Q5VZI3 342 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 GDPD3Q7L5L3 318 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 LHFPL5Q8TAF8 219 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 A0A1B0GTQ1 180 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 MSCO60682 206 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 SMIM18P0DKX4 95 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 ITGB8P26012 769 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 UBE2G1P62253 170 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 CDHR3Q6ZTQ4 885 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 GRINAQ7Z429 371 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 KIAA1958Q8N8K9 716 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 ASB17Q8WXJ9 295 aa14.03□□□□□ -0.16
COL5A1-208ENST00000618395 RGS13O14921 159 aa14.02□□□□□ -0.16
COL5A1-208ENST00000618395 RPS25P62851 125 aaKnown RBP14.02□□□□□ -0.16
COL5A1-208ENST00000618395 AADACL3Q5VUY0 350 aa14.02□□□□□ -0.16
COL5A1-208ENST00000618395 STUMQ69YW2 141 aa14.02□□□□□ -0.16
COL5A1-208ENST00000618395 CYB561A3Q8NBI2 242 aa14.02□□□□□ -0.16
COL5A1-208ENST00000618395 AKT1S1Q96B36 256 aa14.02□□□□□ -0.16
COL5A1-208ENST00000618395 GPA33Q99795 319 aa14.02□□□□□ -0.16
COL5A1-208ENST00000618395 DPH1Q9BZG8 443 aa14.02□□□□□ -0.16
COL5A1-208ENST00000618395 ING1Q9UK53 422 aaPredicted RBP14.02□□□□□ -0.16
COL5A1-208ENST00000618395 LNP1A1A4G5 178 aa14.02□□□□□ -0.16
COL5A1-208ENST00000618395 PHF1O43189 567 aaPredicted RBP14.02□□□□□ -0.16
COL5A1-208ENST00000618395 APODP05090 189 aa14.02□□□□□ -0.16
COL5A1-208ENST00000618395 BLKP51451 505 aa14.02□□□□□ -0.16
COL5A1-208ENST00000618395 MLF1P58340 268 aa14.02□□□□□ -0.16
COL5A1-208ENST00000618395 SLC46A3Q7Z3Q1 461 aa14.02□□□□□ -0.16
COL5A1-208ENST00000618395 ZFP62Q8NB50 900 aaPredicted RBP14.02□□□□□ -0.16
COL5A1-208ENST00000618395 DVL3Q92997 716 aaPredicted RBP14.02□□□□□ -0.16
COL5A1-208ENST00000618395 RPUSD4Q96CM3 377 aaKnown RBP14.02□□□□□ -0.16
COL5A1-208ENST00000618395 XYLT2Q9H1B5 865 aa14.02□□□□□ -0.16
COL5A1-208ENST00000618395 SIX2Q9NPC8 291 aa14.02□□□□□ -0.16
COL5A1-208ENST00000618395 TRPM6Q9BX84 2022 aa14.02□□□□□ -0.16
COL5A1-208ENST00000618395 GALR1P47211 349 aa14.02□□□□□ -0.16
COL5A1-208ENST00000618395 NRP1O14786 923 aa14.02□□□□□ -0.17
COL5A1-208ENST00000618395 B4GALT2O60909 372 aa14.02□□□□□ -0.17
COL5A1-208ENST00000618395 PLP1P60201 277 aa14.02□□□□□ -0.17
COL5A1-208ENST00000618395 PAFAH1B3Q15102 231 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms