RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 ZNF232Q9UNY5 417 aa18.07■□□□□ 0.48
TRAPPC3-208ENST00000616074 IFT52Q9Y366 437 aa18.07■□□□□ 0.48
TRAPPC3-208ENST00000616074 TMEM247A6NEH6 219 aa18.06■□□□□ 0.48
TRAPPC3-208ENST00000616074 NDUFS8O00217 210 aa18.06■□□□□ 0.48
TRAPPC3-208ENST00000616074 LMX1BO60663 402 aa18.06■□□□□ 0.48
TRAPPC3-208ENST00000616074 IGFBP5P24593 272 aa18.06■□□□□ 0.48
TRAPPC3-208ENST00000616074 CALCRP30988 508 aa18.06■□□□□ 0.48
TRAPPC3-208ENST00000616074 NR4A2P43354 598 aa18.06■□□□□ 0.48
TRAPPC3-208ENST00000616074 RPS5P46782 204 aaKnown RBP18.06■□□□□ 0.48
TRAPPC3-208ENST00000616074 GZMKP49863 264 aa18.06■□□□□ 0.48
TRAPPC3-208ENST00000616074 ROR2Q01974 943 aaKnown RBP18.06■□□□□ 0.48
TRAPPC3-208ENST00000616074 ADIPOQQ15848 244 aa18.06■□□□□ 0.48
TRAPPC3-208ENST00000616074 C6orf10Q5SRN2 563 aa18.06■□□□□ 0.48
TRAPPC3-208ENST00000616074 ANKRD16Q6P6B7 361 aa18.06■□□□□ 0.48
TRAPPC3-208ENST00000616074 VHLLQ6RSH7 139 aa18.06■□□□□ 0.48
TRAPPC3-208ENST00000616074 SLC46A3Q7Z3Q1 461 aa18.06■□□□□ 0.48
TRAPPC3-208ENST00000616074 CROCCP2Q86T23 111 aa18.06■□□□□ 0.48
TRAPPC3-208ENST00000616074 MAGEE2Q8TD90 523 aaPredicted RBP18.06■□□□□ 0.48
TRAPPC3-208ENST00000616074 OR52B2Q96RD2 323 aa18.06■□□□□ 0.48
TRAPPC3-208ENST00000616074 VRK1Q99986 396 aaPredicted RBP18.06■□□□□ 0.48
TRAPPC3-208ENST00000616074 PRR14Q9BWN1 585 aa18.06■□□□□ 0.48
TRAPPC3-208ENST00000616074 ARMC7Q9H6L4 198 aa18.06■□□□□ 0.48
TRAPPC3-208ENST00000616074 THUMPD1Q9NXG2 353 aaKnown RBP18.06■□□□□ 0.48
TRAPPC3-208ENST00000616074 ANK2Q01484 3957 aa18.06■□□□□ 0.48
TRAPPC3-208ENST00000616074 B9A039 149 aa18.05■□□□□ 0.48
TRAPPC3-208ENST00000616074 IGLV1-44P01699 117 aa18.05■□□□□ 0.48
TRAPPC3-208ENST00000616074 OR4A8P0C604 315 aa18.05■□□□□ 0.48
TRAPPC3-208ENST00000616074 PAX7P23759 505 aa18.05■□□□□ 0.48
TRAPPC3-208ENST00000616074 POLR2JP52435 117 aaKnown RBP18.05■□□□□ 0.48
TRAPPC3-208ENST00000616074 CLDN17P56750 224 aa18.05■□□□□ 0.48
TRAPPC3-208ENST00000616074 CARTPTQ16568 116 aa18.05■□□□□ 0.48
TRAPPC3-208ENST00000616074 C3orf36Q3SXR2 165 aa18.05■□□□□ 0.48
TRAPPC3-208ENST00000616074 MAL2Q969L2 176 aa18.05■□□□□ 0.48
TRAPPC3-208ENST00000616074 KTI12Q96EK9 354 aaPredicted RBP18.05■□□□□ 0.48
TRAPPC3-208ENST00000616074 ZNF317Q96PQ6 595 aaPredicted RBP18.05■□□□□ 0.48
TRAPPC3-208ENST00000616074 CHODLQ9H9P2 273 aa18.05■□□□□ 0.48
TRAPPC3-208ENST00000616074 B3GAT1Q9P2W7 334 aa18.05■□□□□ 0.48
TRAPPC3-208ENST00000616074 PCDHB14Q9Y5E9 798 aa18.05■□□□□ 0.48
TRAPPC3-208ENST00000616074 IGHV4-61A0A0C4DH41 118 aa18.04■□□□□ 0.48
TRAPPC3-208ENST00000616074 SLC35F4A4IF30 521 aa18.04■□□□□ 0.48
TRAPPC3-208ENST00000616074 UBDO15205 165 aa18.04■□□□□ 0.48
TRAPPC3-208ENST00000616074 PDE5AO76074 875 aa18.04■□□□□ 0.48
TRAPPC3-208ENST00000616074 ZNF432O94892 652 aa18.04■□□□□ 0.48
TRAPPC3-208ENST00000616074 IGKV3-15P01624 115 aa18.04■□□□□ 0.48
TRAPPC3-208ENST00000616074 CELA3BP08861 270 aa18.04■□□□□ 0.48
TRAPPC3-208ENST00000616074 ZNF43P17038 809 aa18.04■□□□□ 0.48
TRAPPC3-208ENST00000616074 GTF2E2P29084 291 aaKnown RBP18.04■□□□□ 0.48
TRAPPC3-208ENST00000616074 SH3BGRP55822 239 aaPredicted RBP18.04■□□□□ 0.48
TRAPPC3-208ENST00000616074 RGNQ15493 299 aa18.04■□□□□ 0.48
TRAPPC3-208ENST00000616074 EFNB3Q15768 340 aa18.04■□□□□ 0.48
TRAPPC3-208ENST00000616074 FAM166AQ6J272 317 aa18.04■□□□□ 0.48
TRAPPC3-208ENST00000616074 IL17RELQ6ZVW7 336 aa18.04■□□□□ 0.48
TRAPPC3-208ENST00000616074 MYPOPQ86VE0 399 aaPredicted RBP18.04■□□□□ 0.48
TRAPPC3-208ENST00000616074 GTF2H4Q92759 462 aa18.04■□□□□ 0.48
TRAPPC3-208ENST00000616074 MSI2Q96DH6 328 aaKnown RBP18.04■□□□□ 0.48
TRAPPC3-208ENST00000616074 FOXN4Q96NZ1 517 aa18.04■□□□□ 0.48
TRAPPC3-208ENST00000616074 PAIP1Q9H074 479 aaKnown RBP18.04■□□□□ 0.48
TRAPPC3-208ENST00000616074 PLK3Q9H4B4 646 aa18.04■□□□□ 0.48
TRAPPC3-208ENST00000616074 BCL2L10Q9HD36 194 aa18.04■□□□□ 0.48
TRAPPC3-208ENST00000616074 A4GALTQ9NPC4 353 aa18.04■□□□□ 0.48
TRAPPC3-208ENST00000616074 KCNS2Q9ULS6 477 aa18.04■□□□□ 0.48
TRAPPC3-208ENST00000616074 RCE1Q9Y256 329 aa18.04■□□□□ 0.48
TRAPPC3-208ENST00000616074 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.04■□□□□ 0.481e-7■■■■□ 20.6
TRAPPC3-208ENST00000616074 LOC100289279A0A1B0GTE1 492 aa18.03■□□□□ 0.48
TRAPPC3-208ENST00000616074 LOC390937A0A1W2PQ73 354 aa18.03■□□□□ 0.48
TRAPPC3-208ENST00000616074 RPL36A-HNRNPH2H7BZ11 118 aa18.03■□□□□ 0.48
TRAPPC3-208ENST00000616074 FZD7O75084 574 aa18.03■□□□□ 0.48
TRAPPC3-208ENST00000616074 APEHP13798 732 aaKnown RBP18.03■□□□□ 0.48
TRAPPC3-208ENST00000616074 ARF1P84077 181 aaKnown RBP18.03■□□□□ 0.48
TRAPPC3-208ENST00000616074 KRTAP24-1Q3LI83 254 aa18.03■□□□□ 0.48
TRAPPC3-208ENST00000616074 SLC2A7Q6PXP3 512 aa18.03■□□□□ 0.48
TRAPPC3-208ENST00000616074 C6orf89Q6UWU4 347 aa18.03■□□□□ 0.48
TRAPPC3-208ENST00000616074 MIER2Q8N344 545 aa18.03■□□□□ 0.48
TRAPPC3-208ENST00000616074 BBS10Q8TAM1 723 aa18.03■□□□□ 0.48
TRAPPC3-208ENST00000616074 SLC35B4Q969S0 331 aa18.03■□□□□ 0.48
TRAPPC3-208ENST00000616074 RSPO3Q9BXY4 272 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC3-208ENST00000616074 MYOZ1Q9NP98 299 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC3-208ENST00000616074 ZNF503-AS2A6NEH8 195 aa18.02■□□□□ 0.48
TRAPPC3-208ENST00000616074 CLIC1O00299 241 aa18.02■□□□□ 0.48
TRAPPC3-208ENST00000616074 SLC43A1O75387 559 aa18.02■□□□□ 0.48
TRAPPC3-208ENST00000616074 BMP2P12643 396 aa18.02■□□□□ 0.48
TRAPPC3-208ENST00000616074 HOXB1P14653 301 aaPredicted RBP18.02■□□□□ 0.48
TRAPPC3-208ENST00000616074 HOXB9P17482 250 aaPredicted RBP18.02■□□□□ 0.48
TRAPPC3-208ENST00000616074 PPOXP50336 477 aa18.02■□□□□ 0.48
TRAPPC3-208ENST00000616074 HGFACQ04756 655 aa18.02■□□□□ 0.48
TRAPPC3-208ENST00000616074 FAM169BQ8N8A8 192 aa18.02■□□□□ 0.48
TRAPPC3-208ENST00000616074 NUP37Q8NFH4 326 aa18.02■□□□□ 0.48
TRAPPC3-208ENST00000616074 OR4F15Q8NGB8 312 aa18.02■□□□□ 0.48
TRAPPC3-208ENST00000616074 TAAR8Q969N4 342 aa18.02■□□□□ 0.48
TRAPPC3-208ENST00000616074 ZNF837Q96EG3 531 aaPredicted RBP18.02■□□□□ 0.48
TRAPPC3-208ENST00000616074 OXGR1Q96P68 337 aa18.02■□□□□ 0.48
TRAPPC3-208ENST00000616074 BPESC1Q9GZL8 116 aa18.02■□□□□ 0.48
TRAPPC3-208ENST00000616074 GPR35Q9HC97 309 aa18.02■□□□□ 0.48
TRAPPC3-208ENST00000616074 MOV10Q9HCE1 1003 aaKnown RBP18.02■□□□□ 0.48
TRAPPC3-208ENST00000616074 RPS6KB2Q9UBS0 482 aa18.02■□□□□ 0.48
TRAPPC3-208ENST00000616074 M0R082 166 aa18.01■□□□□ 0.47
TRAPPC3-208ENST00000616074 AIM2O14862 343 aa18.01■□□□□ 0.47
TRAPPC3-208ENST00000616074 CBR1P16152 277 aa18.01■□□□□ 0.47
TRAPPC3-208ENST00000616074 SRD5A1P18405 259 aa18.01■□□□□ 0.47
TRAPPC3-208ENST00000616074 HTR2AP28223 471 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms