RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 ST8SIA3O43173 380 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 PAPLNO95428 1278 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 MTHFD2P13995 350 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 SHMT2P34897 504 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 UBE2G2P60604 165 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 TMPRSS11FQ6ZWK6 438 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 CLEC14AQ86T13 490 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 ZFP37Q9Y6Q3 630 aaPredicted RBP8.18□□□□□ -1.1
TTC28-208ENST00000612946 TEX50A0A1B0GTY4 177 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 SRMP19623 302 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 EFNA3P52797 238 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 IL17RCQ8NAC3 791 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 OR51A7Q8NH64 312 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 ZC3HAV1LQ96H79 300 aaKnown RBP8.18□□□□□ -1.1
TTC28-208ENST00000612946 CTDSP1Q9GZU7 261 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 PQLC2LA1A4F0 135 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 GABRR3A8MPY1 467 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 ABLIM3O94929 683 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 OGFOD3Q6PK18 319 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 NXPE4Q6UWF7 544 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 FAM160A2Q8N612 972 aaPredicted RBP8.18□□□□□ -1.1
TTC28-208ENST00000612946 CDRT4Q8N9R6 151 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 OR6N1Q8NGY5 312 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 OR2G2Q8NGZ5 317 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 LMLNQ96KR4 655 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 ZNF558Q96NG5 402 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 ADARB2Q9NS39 739 aaKnown RBP8.18□□□□□ -1.1
TTC28-208ENST00000612946 CD80P33681 288 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 CERS5Q8N5B7 392 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 NANOGP1Q8N7R0 232 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 DCAF4L2Q8NA75 395 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 RELL2Q8NC24 303 aaPredicted RBP8.18□□□□□ -1.1
TTC28-208ENST00000612946 MAP3K3Q99759 626 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 MACROD1Q9BQ69 325 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 OSER1Q9NX31 292 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 SLC23A1Q9UHI7 598 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 AJAP1Q9UKB5 411 aaPredicted RBP8.18□□□□□ -1.1
TTC28-208ENST00000612946 FLVCR2Q9UPI3 526 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 SAP18O00422 153 aaKnown RBP8.18□□□□□ -1.1
TTC28-208ENST00000612946 CD37P11049 281 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 KCNE1P15382 129 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 AGTR2P50052 363 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 CATR1Q13166 79 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 ABHD4Q8TB40 342 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 SMIM12Q96EX1 92 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 MRGPRX2Q96LB1 330 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 TDP1Q9NUW8 608 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 GPR32O75388 356 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 CTSLP07711 333 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 CLDN10P78369 228 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 FAM74A1Q5RGS3 127 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 POMZP3Q6PJE2 187 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 SPATC1Q76KD6 591 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 L3MBTL4Q8NA19 623 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 PPP1R35Q8TAP8 253 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 SAMD8Q96LT4 415 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 USB1Q9BQ65 265 aaKnown RBP8.18□□□□□ -1.1
TTC28-208ENST00000612946 DMRT1Q9Y5R6 373 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 PLCH1Q4KWH8 1693 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 DLEC1Q9Y238 1755 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 TMEM265A0A087WTH1 108 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 RNASEK-C17orf49H0YIS7 233 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 LIPAP38571 399 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 CTU2Q2VPK5 515 aaKnown RBP8.18□□□□□ -1.1
TTC28-208ENST00000612946 FAM74A3Q4VXF1 159 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 OR4A47Q6IF82 309 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 FCRLAQ7L513 359 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 OR4A4PQ8NGN8 299 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 GPR88Q9GZN0 384 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 TLR9Q9NR96 1032 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 CSAG2Q9Y5P2 127 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 MCM3APO60318 1980 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 ZNF92Q03936 586 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 TPGS2Q68CL5 300 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 PITX2Q99697 317 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 TM7SF3Q9NS93 570 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 OR1A2Q9Y585 309 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 ZDBF2Q9HCK1 2354 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 A0A1W2PPK0 400 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 GALTP07902 379 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 TACR1P25103 407 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 APEX1P27695 318 aaKnown RBP8.18□□□□□ -1.1
TTC28-208ENST00000612946 ZNF738Q8NE65 137 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 OR8U1Q8NH10 309 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 KHSRPQ92945 711 aaKnown RBP eCLIP8.18□□□□□ -1.13e-6■■■■□ 22
TTC28-208ENST00000612946 PDGFDQ9GZP0 370 aaPredicted RBP8.18□□□□□ -1.1
TTC28-208ENST00000612946 ARV1Q9H2C2 271 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 RHOFQ9HBH0 211 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 PITPNC1Q9UKF7 332 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 CBLCQ9ULV8 474 aa8.18□□□□□ -1.1
TTC28-208ENST00000612946 TRAV1-2A0A0B4J238 106 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 XKRY2A2RUG3 117 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 EPXP11678 715 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 IAH1Q2TAA2 248 aaPredicted RBP8.17□□□□□ -1.1
TTC28-208ENST00000612946 ASPGQ86U10 573 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 SLC22A24Q8N4F4 322 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 BVESQ8NE79 360 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 HUS1BQ8NHY5 278 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 FZD8Q9H461 694 aa8.17□□□□□ -1.1
TTC28-208ENST00000612946 MED9Q9NWA0 146 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms