RNA–Protein interactions for RNA: ENST00000608284.1

HDDC2-203, Transcript of HD domain containing 2, humanhuman

TSL 3 BASIC

Gene HDDC2, Length 538 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-203ENST00000608284 LIN52Q52LA3 116 aa13.67□□□□□ -0.22
HDDC2-203ENST00000608284 GKAP1Q5VSY0 366 aaPredicted RBP13.67□□□□□ -0.22
HDDC2-203ENST00000608284 ZNF621Q6ZSS3 439 aa13.67□□□□□ -0.22
HDDC2-203ENST00000608284 RIBC1Q8N443 379 aaPredicted RBP13.67□□□□□ -0.22
HDDC2-203ENST00000608284 EIF1ADQ8N9N8 165 aaKnown RBP13.67□□□□□ -0.22
HDDC2-203ENST00000608284 OR51F2Q8NH61 342 aa13.67□□□□□ -0.22
HDDC2-203ENST00000608284 MGARPQ8TDB4 240 aa13.67□□□□□ -0.22
HDDC2-203ENST00000608284 SLC25A36Q96CQ1 311 aa13.67□□□□□ -0.22
HDDC2-203ENST00000608284 PPP1R36Q96LQ0 422 aa13.67□□□□□ -0.22
HDDC2-203ENST00000608284 PANX1Q96RD7 426 aa13.67□□□□□ -0.22
HDDC2-203ENST00000608284 RBM4Q9BWF3 364 aaKnown RBP13.67□□□□□ -0.22
HDDC2-203ENST00000608284 SLC38A1Q9H2H9 487 aa13.67□□□□□ -0.22
HDDC2-203ENST00000608284 TPK1Q9H3S4 243 aa13.67□□□□□ -0.22
HDDC2-203ENST00000608284 AKTIPQ9H8T0 292 aa13.67□□□□□ -0.22
HDDC2-203ENST00000608284 CALML5Q9NZT1 146 aa13.67□□□□□ -0.22
HDDC2-203ENST00000608284 IGHV2OR16-5A0A0B4J2B6 119 aa13.66□□□□□ -0.22
HDDC2-203ENST00000608284 TMEM247A6NEH6 219 aa13.66□□□□□ -0.22
HDDC2-203ENST00000608284 CCDC154A6NI56 674 aa13.66□□□□□ -0.22
HDDC2-203ENST00000608284 RPL36A-HNRNPH2H7BZ11 118 aa13.66□□□□□ -0.22
HDDC2-203ENST00000608284 M0R233 179 aa13.66□□□□□ -0.22
HDDC2-203ENST00000608284 SPAG7O75391 227 aa13.66□□□□□ -0.22
HDDC2-203ENST00000608284 KRT75O95678 551 aa13.66□□□□□ -0.22
HDDC2-203ENST00000608284 MSMBP08118 114 aa13.66□□□□□ -0.22
HDDC2-203ENST00000608284 MYZAPP0CAP1 466 aa13.66□□□□□ -0.22
HDDC2-203ENST00000608284 SAGP10523 405 aaPredicted RBP13.66□□□□□ -0.22
HDDC2-203ENST00000608284 LSP1P33241 339 aa13.66□□□□□ -0.22
HDDC2-203ENST00000608284 COMPP49747 757 aaPredicted RBP13.66□□□□□ -0.22
HDDC2-203ENST00000608284 TMEM33P57088 247 aa13.66□□□□□ -0.22
HDDC2-203ENST00000608284 POU3F1Q03052 451 aaPredicted RBP13.66□□□□□ -0.22
HDDC2-203ENST00000608284 IFFO1Q0D2I5 559 aa13.66□□□□□ -0.22
HDDC2-203ENST00000608284 BNIP2Q12982 314 aa13.66□□□□□ -0.22
HDDC2-203ENST00000608284 TRMT5Q32P41 509 aaKnown RBP13.66□□□□□ -0.22
HDDC2-203ENST00000608284 ZNF311Q5JNZ3 666 aa13.66□□□□□ -0.22
HDDC2-203ENST00000608284 KRT80Q6KB66 452 aa13.66□□□□□ -0.22
HDDC2-203ENST00000608284 FAHD2BQ6P2I3 314 aaPredicted RBP13.66□□□□□ -0.22
HDDC2-203ENST00000608284 EPHX4Q8IUS5 362 aa13.66□□□□□ -0.22
HDDC2-203ENST00000608284 NUDCD3Q8IVD9 361 aa13.66□□□□□ -0.22
HDDC2-203ENST00000608284 GSPT2Q8IYD1 628 aaKnown RBP13.66□□□□□ -0.22
HDDC2-203ENST00000608284 CDK20Q8IZL9 346 aa13.66□□□□□ -0.22
HDDC2-203ENST00000608284 KIRREL3Q8IZU9 778 aa13.66□□□□□ -0.22
HDDC2-203ENST00000608284 PIK3C3Q8NEB9 887 aa13.66□□□□□ -0.22
HDDC2-203ENST00000608284 OR52P1PQ8NH57 321 aa13.66□□□□□ -0.22
HDDC2-203ENST00000608284 MFSD8Q8NHS3 518 aa13.66□□□□□ -0.22
HDDC2-203ENST00000608284 STK35Q8TDR2 534 aa13.66□□□□□ -0.22
HDDC2-203ENST00000608284 TCP10LQ8TDR4 215 aa13.66□□□□□ -0.22
HDDC2-203ENST00000608284 FAM216AQ8WUB2 273 aa13.66□□□□□ -0.22
HDDC2-203ENST00000608284 RDH5Q92781 318 aa13.66□□□□□ -0.22
HDDC2-203ENST00000608284 FAHD2AQ96GK7 314 aa13.66□□□□□ -0.22
HDDC2-203ENST00000608284 LPAR2Q9HBW0 351 aa13.66□□□□□ -0.22
HDDC2-203ENST00000608284 SLC17A7Q9P2U7 560 aa13.66□□□□□ -0.22
HDDC2-203ENST00000608284 BTNL2Q9UIR0 455 aa13.66□□□□□ -0.22
HDDC2-203ENST00000608284 RCE1Q9Y256 329 aa13.66□□□□□ -0.22
HDDC2-203ENST00000608284 TMEM129A0AVI4 362 aa13.65□□□□□ -0.22
HDDC2-203ENST00000608284 PRAMEF27A3QJZ7 478 aa13.65□□□□□ -0.22
HDDC2-203ENST00000608284 FAM157AC9JC47 383 aa13.65□□□□□ -0.22
HDDC2-203ENST00000608284 LYNX1G3V0Z9 82 aa13.65□□□□□ -0.22
HDDC2-203ENST00000608284 GKN3PP0CG01 181 aa13.65□□□□□ -0.22
HDDC2-203ENST00000608284 LYNX1P0DP58 116 aa13.65□□□□□ -0.22
HDDC2-203ENST00000608284 ACHEP22303 614 aa13.65□□□□□ -0.22
HDDC2-203ENST00000608284 LIMS1P48059 325 aa13.65□□□□□ -0.22
HDDC2-203ENST00000608284 RPS23P62266 143 aaKnown RBP13.65□□□□□ -0.22
HDDC2-203ENST00000608284 GALK2Q01415 458 aa13.65□□□□□ -0.22
HDDC2-203ENST00000608284 SPANXN4Q5MJ08 99 aa13.65□□□□□ -0.22
HDDC2-203ENST00000608284 PEG10Q86TG7 708 aaKnown RBP13.65□□□□□ -0.22
HDDC2-203ENST00000608284 SNX32Q86XE0 403 aa13.65□□□□□ -0.22
HDDC2-203ENST00000608284 CCDC115Q96NT0 180 aa13.65□□□□□ -0.22
HDDC2-203ENST00000608284 LRRC37BQ96QE4 947 aa13.65□□□□□ -0.22
HDDC2-203ENST00000608284 NARFLQ9H6Q4 476 aa13.65□□□□□ -0.22
HDDC2-203ENST00000608284 GPR35Q9HC97 309 aa13.65□□□□□ -0.22
HDDC2-203ENST00000608284 B3GAT2Q9NPZ5 323 aa13.65□□□□□ -0.22
HDDC2-203ENST00000608284 RLIMQ9NVW2 624 aa13.65□□□□□ -0.22
HDDC2-203ENST00000608284 RPS6KB2Q9UBS0 482 aa13.65□□□□□ -0.22
HDDC2-203ENST00000608284 TRAV20A0A0B4J274 112 aa13.64□□□□□ -0.23
HDDC2-203ENST00000608284 TMEM89A2RUT3 159 aa13.64□□□□□ -0.23
HDDC2-203ENST00000608284 CDHR4A6H8M9 788 aa13.64□□□□□ -0.23
HDDC2-203ENST00000608284 TMEM229AB2RXF0 380 aa13.64□□□□□ -0.23
HDDC2-203ENST00000608284 E9PBE3 544 aa13.64□□□□□ -0.23
HDDC2-203ENST00000608284 PPIHO43447 177 aaKnown RBP13.64□□□□□ -0.23
HDDC2-203ENST00000608284 FRS3O43559 492 aa13.64□□□□□ -0.23
HDDC2-203ENST00000608284 RGS9O75916 674 aaPredicted RBP13.64□□□□□ -0.23
HDDC2-203ENST00000608284 ZNF432O94892 652 aa13.64□□□□□ -0.23
HDDC2-203ENST00000608284 BPGMP07738 259 aa13.64□□□□□ -0.23
HDDC2-203ENST00000608284 CELA3BP08861 270 aa13.64□□□□□ -0.23
HDDC2-203ENST00000608284 CD79AP11912 226 aa13.64□□□□□ -0.23
HDDC2-203ENST00000608284 LBPP18428 481 aa13.64□□□□□ -0.23
HDDC2-203ENST00000608284 NR4A1P22736 598 aa13.64□□□□□ -0.23
HDDC2-203ENST00000608284 SELENOVP59797 346 aa13.64□□□□□ -0.23
HDDC2-203ENST00000608284 CEACAM16Q2WEN9 425 aa13.64□□□□□ -0.23
HDDC2-203ENST00000608284 ATG16L1Q676U5 607 aa13.64□□□□□ -0.23
HDDC2-203ENST00000608284 THSD4Q6ZMP0 1018 aa13.64□□□□□ -0.23
HDDC2-203ENST00000608284 USP43Q70EL4 1123 aa13.64□□□□□ -0.23
HDDC2-203ENST00000608284 LINGO2Q7L985 606 aa13.64□□□□□ -0.23
HDDC2-203ENST00000608284 MDP1Q86V88 176 aa13.64□□□□□ -0.23
HDDC2-203ENST00000608284 LRRC34Q8IZ02 419 aa13.64□□□□□ -0.23
HDDC2-203ENST00000608284 KDM8Q8N371 416 aa13.64□□□□□ -0.23
HDDC2-203ENST00000608284 SEMA6DQ8NFY4 1073 aa13.64□□□□□ -0.23
HDDC2-203ENST00000608284 OXGR1Q96P68 337 aa13.64□□□□□ -0.23
HDDC2-203ENST00000608284 ZBTB18Q99592 522 aa13.64□□□□□ -0.23
HDDC2-203ENST00000608284 ZNF416Q9BWM5 594 aa13.64□□□□□ -0.23
HDDC2-203ENST00000608284 SEC61A2Q9H9S3 476 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms